data_7EBK
#
_model_server_result.job_id            mCJzqSkPyQa_4Yd3-9vgog 
_model_server_result.datetime_utc      '2024-10-12 05:29:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ebk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1202}' 
#
_entry.id    7EBK 
#
_exptl.entry_id    7EBK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7EBK 
_cell.length_a            64.646 
_cell.length_b            64.646 
_cell.length_c            251.744 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EBK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    'P 65 2 (x,y,z+1/12)' 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ARG 8 B ARG 8 1_555 B N M3L 9 B M3L 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 A SG CYS 9 A CYS 999 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc2 A SG CYS 12 A CYS 1002 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc3 A SG CYS 21 A CYS 1011 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc4 A SG CYS 24 A CYS 1014 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc5 A ND1 HIS 29 A HIS 1019 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc6 A SG CYS 32 A CYS 1022 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc7 A SG CYS 47 A CYS 1037 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc8 A SG CYS 50 A CYS 1040 1_555 D ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7EBK 
_atom_sites.fract_transf_matrix[1][1]    0.015469 
_atom_sites.fract_transf_matrix[1][2]    0.008931 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017862 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 1201 1 ZN ZN . 
D 3 ZN A 1 1202 2 ZN ZN . 
E 4 HOH A 1 1301 169 HOH HOH . 
E 4 HOH A 2 1302 162 HOH HOH . 
E 4 HOH A 3 1303 25 HOH HOH . 
E 4 HOH A 4 1304 151 HOH HOH . 
E 4 HOH A 5 1305 168 HOH HOH . 
E 4 HOH A 6 1306 47 HOH HOH . 
E 4 HOH A 7 1307 83 HOH HOH . 
E 4 HOH A 8 1308 102 HOH HOH . 
E 4 HOH A 9 1309 147 HOH HOH . 
E 4 HOH A 10 1310 81 HOH HOH . 
E 4 HOH A 11 1311 49 HOH HOH . 
E 4 HOH A 12 1312 132 HOH HOH . 
E 4 HOH A 13 1313 109 HOH HOH . 
E 4 HOH A 14 1314 26 HOH HOH . 
E 4 HOH A 15 1315 69 HOH HOH . 
E 4 HOH A 16 1316 17 HOH HOH . 
E 4 HOH A 17 1317 37 HOH HOH . 
E 4 HOH A 18 1318 46 HOH HOH . 
E 4 HOH A 19 1319 58 HOH HOH . 
E 4 HOH A 20 1320 129 HOH HOH . 
E 4 HOH A 21 1321 10 HOH HOH . 
E 4 HOH A 22 1322 124 HOH HOH . 
E 4 HOH A 23 1323 12 HOH HOH . 
E 4 HOH A 24 1324 65 HOH HOH . 
E 4 HOH A 25 1325 143 HOH HOH . 
E 4 HOH A 26 1326 59 HOH HOH . 
E 4 HOH A 27 1327 92 HOH HOH . 
E 4 HOH A 28 1328 167 HOH HOH . 
E 4 HOH A 29 1329 1 HOH HOH . 
E 4 HOH A 30 1330 33 HOH HOH . 
E 4 HOH A 31 1331 103 HOH HOH . 
E 4 HOH A 32 1332 2 HOH HOH . 
E 4 HOH A 33 1333 8 HOH HOH . 
E 4 HOH A 34 1334 121 HOH HOH . 
E 4 HOH A 35 1335 4 HOH HOH . 
E 4 HOH A 36 1336 63 HOH HOH . 
E 4 HOH A 37 1337 6 HOH HOH . 
E 4 HOH A 38 1338 34 HOH HOH . 
E 4 HOH A 39 1339 52 HOH HOH . 
E 4 HOH A 40 1340 30 HOH HOH . 
E 4 HOH A 41 1341 104 HOH HOH . 
E 4 HOH A 42 1342 84 HOH HOH . 
E 4 HOH A 43 1343 41 HOH HOH . 
E 4 HOH A 44 1344 19 HOH HOH . 
E 4 HOH A 45 1345 111 HOH HOH . 
E 4 HOH A 46 1346 27 HOH HOH . 
E 4 HOH A 47 1347 180 HOH HOH . 
E 4 HOH A 48 1348 23 HOH HOH . 
E 4 HOH A 49 1349 99 HOH HOH . 
E 4 HOH A 50 1350 36 HOH HOH . 
E 4 HOH A 51 1351 7 HOH HOH . 
E 4 HOH A 52 1352 85 HOH HOH . 
E 4 HOH A 53 1353 56 HOH HOH . 
E 4 HOH A 54 1354 16 HOH HOH . 
E 4 HOH A 55 1355 122 HOH HOH . 
E 4 HOH A 56 1356 40 HOH HOH . 
E 4 HOH A 57 1357 171 HOH HOH . 
E 4 HOH A 58 1358 177 HOH HOH . 
E 4 HOH A 59 1359 123 HOH HOH . 
E 4 HOH A 60 1360 110 HOH HOH . 
E 4 HOH A 61 1361 18 HOH HOH . 
E 4 HOH A 62 1362 31 HOH HOH . 
E 4 HOH A 63 1363 60 HOH HOH . 
E 4 HOH A 64 1364 28 HOH HOH . 
E 4 HOH A 65 1365 55 HOH HOH . 
E 4 HOH A 66 1366 73 HOH HOH . 
E 4 HOH A 67 1367 186 HOH HOH . 
E 4 HOH A 68 1368 3 HOH HOH . 
E 4 HOH A 69 1369 24 HOH HOH . 
E 4 HOH A 70 1370 125 HOH HOH . 
E 4 HOH A 71 1371 106 HOH HOH . 
E 4 HOH A 72 1372 100 HOH HOH . 
E 4 HOH A 73 1373 45 HOH HOH . 
E 4 HOH A 74 1374 5 HOH HOH . 
E 4 HOH A 75 1375 13 HOH HOH . 
E 4 HOH A 76 1376 62 HOH HOH . 
E 4 HOH A 77 1377 20 HOH HOH . 
E 4 HOH A 78 1378 21 HOH HOH . 
E 4 HOH A 79 1379 127 HOH HOH . 
E 4 HOH A 80 1380 44 HOH HOH . 
E 4 HOH A 81 1381 64 HOH HOH . 
E 4 HOH A 82 1382 76 HOH HOH . 
E 4 HOH A 83 1383 182 HOH HOH . 
E 4 HOH A 84 1384 183 HOH HOH . 
E 4 HOH A 85 1385 43 HOH HOH . 
E 4 HOH A 86 1386 112 HOH HOH . 
E 4 HOH A 87 1387 51 HOH HOH . 
E 4 HOH A 88 1388 115 HOH HOH . 
E 4 HOH A 89 1389 120 HOH HOH . 
E 4 HOH A 90 1390 130 HOH HOH . 
E 4 HOH A 91 1391 39 HOH HOH . 
E 4 HOH A 92 1392 79 HOH HOH . 
E 4 HOH A 93 1393 161 HOH HOH . 
E 4 HOH A 94 1394 74 HOH HOH . 
E 4 HOH A 95 1395 9 HOH HOH . 
E 4 HOH A 96 1396 93 HOH HOH . 
E 4 HOH A 97 1397 38 HOH HOH . 
E 4 HOH A 98 1398 105 HOH HOH . 
E 4 HOH A 99 1399 172 HOH HOH . 
E 4 HOH A 100 1400 90 HOH HOH . 
E 4 HOH A 101 1401 95 HOH HOH . 
E 4 HOH A 102 1402 138 HOH HOH . 
E 4 HOH A 103 1403 11 HOH HOH . 
E 4 HOH A 104 1404 61 HOH HOH . 
E 4 HOH A 105 1405 71 HOH HOH . 
E 4 HOH A 106 1406 14 HOH HOH . 
E 4 HOH A 107 1407 68 HOH HOH . 
E 4 HOH A 108 1408 29 HOH HOH . 
E 4 HOH A 109 1409 166 HOH HOH . 
E 4 HOH A 110 1410 175 HOH HOH . 
E 4 HOH A 111 1411 67 HOH HOH . 
E 4 HOH A 112 1412 54 HOH HOH . 
E 4 HOH A 113 1413 72 HOH HOH . 
E 4 HOH A 114 1414 188 HOH HOH . 
E 4 HOH A 115 1415 82 HOH HOH . 
E 4 HOH A 116 1416 87 HOH HOH . 
E 4 HOH A 117 1417 156 HOH HOH . 
E 4 HOH A 118 1418 155 HOH HOH . 
E 4 HOH A 119 1419 35 HOH HOH . 
E 4 HOH A 120 1420 15 HOH HOH . 
E 4 HOH A 121 1421 108 HOH HOH . 
E 4 HOH A 122 1422 70 HOH HOH . 
E 4 HOH A 123 1423 164 HOH HOH . 
E 4 HOH A 124 1424 157 HOH HOH . 
E 4 HOH A 125 1425 78 HOH HOH . 
E 4 HOH A 126 1426 141 HOH HOH . 
E 4 HOH A 127 1427 66 HOH HOH . 
E 4 HOH A 128 1428 135 HOH HOH . 
E 4 HOH A 129 1429 170 HOH HOH . 
E 4 HOH A 130 1430 146 HOH HOH . 
E 4 HOH A 131 1431 42 HOH HOH . 
E 4 HOH A 132 1432 136 HOH HOH . 
E 4 HOH A 133 1433 160 HOH HOH . 
E 4 HOH A 134 1434 140 HOH HOH . 
E 4 HOH A 135 1435 145 HOH HOH . 
E 4 HOH A 136 1436 116 HOH HOH . 
E 4 HOH A 137 1437 48 HOH HOH . 
E 4 HOH A 138 1438 149 HOH HOH . 
E 4 HOH A 139 1439 89 HOH HOH . 
E 4 HOH A 140 1440 139 HOH HOH . 
E 4 HOH A 141 1441 86 HOH HOH . 
E 4 HOH A 142 1442 53 HOH HOH . 
E 4 HOH A 143 1443 158 HOH HOH . 
E 4 HOH A 144 1444 107 HOH HOH . 
E 4 HOH A 145 1445 114 HOH HOH . 
E 4 HOH A 146 1446 50 HOH HOH . 
E 4 HOH A 147 1447 94 HOH HOH . 
E 4 HOH A 148 1448 179 HOH HOH . 
E 4 HOH A 149 1449 32 HOH HOH . 
E 4 HOH A 150 1450 165 HOH HOH . 
E 4 HOH A 151 1451 57 HOH HOH . 
E 4 HOH A 152 1452 91 HOH HOH . 
E 4 HOH A 153 1453 184 HOH HOH . 
E 4 HOH A 154 1454 152 HOH HOH . 
E 4 HOH A 155 1455 142 HOH HOH . 
E 4 HOH A 156 1456 185 HOH HOH . 
E 4 HOH A 157 1457 154 HOH HOH . 
E 4 HOH A 158 1458 98 HOH HOH . 
E 4 HOH A 159 1459 134 HOH HOH . 
E 4 HOH A 160 1460 101 HOH HOH . 
E 4 HOH A 161 1461 163 HOH HOH . 
E 4 HOH A 162 1462 144 HOH HOH . 
E 4 HOH A 163 1463 118 HOH HOH . 
E 4 HOH A 164 1464 133 HOH HOH . 
E 4 HOH A 165 1465 148 HOH HOH . 
E 4 HOH A 166 1466 113 HOH HOH . 
E 4 HOH A 167 1467 187 HOH HOH . 
E 4 HOH A 168 1468 126 HOH HOH . 
E 4 HOH A 169 1469 96 HOH HOH . 
E 4 HOH A 170 1470 80 HOH HOH . 
E 4 HOH A 171 1471 153 HOH HOH . 
E 4 HOH A 172 1472 159 HOH HOH . 
E 4 HOH A 173 1473 173 HOH HOH . 
E 4 HOH A 174 1474 97 HOH HOH . 
E 4 HOH A 175 1475 119 HOH HOH . 
E 4 HOH A 176 1476 174 HOH HOH . 
E 4 HOH A 177 1477 150 HOH HOH . 
E 4 HOH A 178 1478 181 HOH HOH . 
E 4 HOH A 179 1479 77 HOH HOH . 
E 4 HOH A 180 1480 88 HOH HOH . 
E 4 HOH A 181 1481 128 HOH HOH . 
E 4 HOH A 182 1482 131 HOH HOH . 
E 4 HOH A 183 1483 178 HOH HOH . 
F 4 HOH B 1 101 22 HOH HOH . 
F 4 HOH B 2 102 75 HOH HOH . 
F 4 HOH B 3 103 117 HOH HOH . 
F 4 HOH B 4 104 176 HOH HOH . 
F 4 HOH B 5 105 137 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               85.275 
_atom_site.Cartn_y               85.951 
_atom_site.Cartn_z               2.298 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#