data_7EBQ
#
_model_server_result.job_id            Jop2wnpBhWdGD05H9PizJA 
_model_server_result.datetime_utc      '2024-10-20 19:03:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ebq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    7EBQ 
#
_exptl.entry_id    7EBQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EBQ 
_cell.length_a            64.17 
_cell.length_b            113.469 
_cell.length_c            164.579 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EBQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 18 A ASP 40 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? 
metalc ? metalc2 A OD1 ASP 19 A ASP 41 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? 
metalc ? metalc3 A OD1 ASP 346 A ASP 368 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? 
metalc ? metalc4 A OD2 ASP 346 A ASP 368 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc5 A OE1 GLN 347 A GLN 369 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.135 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7EBQ 
_atom_sites.fract_transf_matrix[1][1]    0.015584 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008813 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006076 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 601 1 NAG NAG . 
C 3 CA A 1 602 1 CA CA . 
D 4 HOH A 1 701 148 HOH HOH . 
D 4 HOH A 2 702 103 HOH HOH . 
D 4 HOH A 3 703 137 HOH HOH . 
D 4 HOH A 4 704 164 HOH HOH . 
D 4 HOH A 5 705 114 HOH HOH . 
D 4 HOH A 6 706 46 HOH HOH . 
D 4 HOH A 7 707 4 HOH HOH . 
D 4 HOH A 8 708 206 HOH HOH . 
D 4 HOH A 9 709 155 HOH HOH . 
D 4 HOH A 10 710 150 HOH HOH . 
D 4 HOH A 11 711 47 HOH HOH . 
D 4 HOH A 12 712 2 HOH HOH . 
D 4 HOH A 13 713 68 HOH HOH . 
D 4 HOH A 14 714 161 HOH HOH . 
D 4 HOH A 15 715 49 HOH HOH . 
D 4 HOH A 16 716 147 HOH HOH . 
D 4 HOH A 17 717 50 HOH HOH . 
D 4 HOH A 18 718 57 HOH HOH . 
D 4 HOH A 19 719 22 HOH HOH . 
D 4 HOH A 20 720 241 HOH HOH . 
D 4 HOH A 21 721 53 HOH HOH . 
D 4 HOH A 22 722 74 HOH HOH . 
D 4 HOH A 23 723 178 HOH HOH . 
D 4 HOH A 24 724 1 HOH HOH . 
D 4 HOH A 25 725 56 HOH HOH . 
D 4 HOH A 26 726 62 HOH HOH . 
D 4 HOH A 27 727 170 HOH HOH . 
D 4 HOH A 28 728 157 HOH HOH . 
D 4 HOH A 29 729 3 HOH HOH . 
D 4 HOH A 30 730 21 HOH HOH . 
D 4 HOH A 31 731 95 HOH HOH . 
D 4 HOH A 32 732 55 HOH HOH . 
D 4 HOH A 33 733 196 HOH HOH . 
D 4 HOH A 34 734 199 HOH HOH . 
D 4 HOH A 35 735 218 HOH HOH . 
D 4 HOH A 36 736 219 HOH HOH . 
D 4 HOH A 37 737 110 HOH HOH . 
D 4 HOH A 38 738 52 HOH HOH . 
D 4 HOH A 39 739 158 HOH HOH . 
D 4 HOH A 40 740 145 HOH HOH . 
D 4 HOH A 41 741 113 HOH HOH . 
D 4 HOH A 42 742 9 HOH HOH . 
D 4 HOH A 43 743 163 HOH HOH . 
D 4 HOH A 44 744 11 HOH HOH . 
D 4 HOH A 45 745 152 HOH HOH . 
D 4 HOH A 46 746 119 HOH HOH . 
D 4 HOH A 47 747 109 HOH HOH . 
D 4 HOH A 48 748 106 HOH HOH . 
D 4 HOH A 49 749 177 HOH HOH . 
D 4 HOH A 50 750 107 HOH HOH . 
D 4 HOH A 51 751 8 HOH HOH . 
D 4 HOH A 52 752 78 HOH HOH . 
D 4 HOH A 53 753 75 HOH HOH . 
D 4 HOH A 54 754 85 HOH HOH . 
D 4 HOH A 55 755 29 HOH HOH . 
D 4 HOH A 56 756 89 HOH HOH . 
D 4 HOH A 57 757 129 HOH HOH . 
D 4 HOH A 58 758 77 HOH HOH . 
D 4 HOH A 59 759 143 HOH HOH . 
D 4 HOH A 60 760 38 HOH HOH . 
D 4 HOH A 61 761 26 HOH HOH . 
D 4 HOH A 62 762 33 HOH HOH . 
D 4 HOH A 63 763 232 HOH HOH . 
D 4 HOH A 64 764 15 HOH HOH . 
D 4 HOH A 65 765 6 HOH HOH . 
D 4 HOH A 66 766 117 HOH HOH . 
D 4 HOH A 67 767 34 HOH HOH . 
D 4 HOH A 68 768 154 HOH HOH . 
D 4 HOH A 69 769 144 HOH HOH . 
D 4 HOH A 70 770 17 HOH HOH . 
D 4 HOH A 71 771 60 HOH HOH . 
D 4 HOH A 72 772 184 HOH HOH . 
D 4 HOH A 73 773 135 HOH HOH . 
D 4 HOH A 74 774 189 HOH HOH . 
D 4 HOH A 75 775 61 HOH HOH . 
D 4 HOH A 76 776 190 HOH HOH . 
D 4 HOH A 77 777 30 HOH HOH . 
D 4 HOH A 78 778 205 HOH HOH . 
D 4 HOH A 79 779 176 HOH HOH . 
D 4 HOH A 80 780 101 HOH HOH . 
D 4 HOH A 81 781 35 HOH HOH . 
D 4 HOH A 82 782 172 HOH HOH . 
D 4 HOH A 83 783 28 HOH HOH . 
D 4 HOH A 84 784 45 HOH HOH . 
D 4 HOH A 85 785 120 HOH HOH . 
D 4 HOH A 86 786 188 HOH HOH . 
D 4 HOH A 87 787 201 HOH HOH . 
D 4 HOH A 88 788 167 HOH HOH . 
D 4 HOH A 89 789 216 HOH HOH . 
D 4 HOH A 90 790 20 HOH HOH . 
D 4 HOH A 91 791 146 HOH HOH . 
D 4 HOH A 92 792 105 HOH HOH . 
D 4 HOH A 93 793 159 HOH HOH . 
D 4 HOH A 94 794 174 HOH HOH . 
D 4 HOH A 95 795 253 HOH HOH . 
D 4 HOH A 96 796 14 HOH HOH . 
D 4 HOH A 97 797 217 HOH HOH . 
D 4 HOH A 98 798 7 HOH HOH . 
D 4 HOH A 99 799 231 HOH HOH . 
D 4 HOH A 100 800 54 HOH HOH . 
D 4 HOH A 101 801 27 HOH HOH . 
D 4 HOH A 102 802 175 HOH HOH . 
D 4 HOH A 103 803 111 HOH HOH . 
D 4 HOH A 104 804 23 HOH HOH . 
D 4 HOH A 105 805 187 HOH HOH . 
D 4 HOH A 106 806 195 HOH HOH . 
D 4 HOH A 107 807 244 HOH HOH . 
D 4 HOH A 108 808 132 HOH HOH . 
D 4 HOH A 109 809 10 HOH HOH . 
D 4 HOH A 110 810 211 HOH HOH . 
D 4 HOH A 111 811 18 HOH HOH . 
D 4 HOH A 112 812 130 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 -5.194 4.974 11.006 1 30.94 ? C1 NAG 601 A 1 
HETATM 2 C C2 NAG . . . B 2 -4.018 5.055 11.888 1 26.66 ? C2 NAG 601 A 1 
HETATM 3 C C3 NAG . . . B 2 -3.416 3.725 11.741 1 26.64 ? C3 NAG 601 A 1 
HETATM 4 C C4 NAG . . . B 2 -4.387 2.723 12.243 1 26.96 ? C4 NAG 601 A 1 
HETATM 5 C C5 NAG . . . B 2 -5.689 2.879 11.492 1 32.06 ? C5 NAG 601 A 1 
HETATM 6 C C6 NAG . . . B 2 -6.845 2.073 11.987 1 31.39 ? C6 NAG 601 A 1 
HETATM 7 C C7 NAG . . . B 2 -3.24 7.28 11.798 1 33.1 ? C7 NAG 601 A 1 
HETATM 8 C C8 NAG . . . B 2 -2.42 8.25 11.08 1 26.89 ? C8 NAG 601 A 1 
HETATM 9 N N2 NAG . . . B 2 -3.192 6.07 11.379 1 30.04 ? N2 NAG 601 A 1 
HETATM 10 O O1 NAG . . . B 2 -5.776 6.209 10.914 1 44.42 ? O1 NAG 601 A 1 
HETATM 11 O O3 NAG . . . B 2 -2.247 3.691 12.425 1 26.69 ? O3 NAG 601 A 1 
HETATM 12 O O4 NAG . . . B 2 -3.915 1.447 12.018 1 28.62 ? O4 NAG 601 A 1 
HETATM 13 O O5 NAG . . . B 2 -6.12 4.184 11.597 1 31.86 ? O5 NAG 601 A 1 
HETATM 14 O O6 NAG . . . B 2 -6.397 1.194 12.927 1 32.08 ? O6 NAG 601 A 1 
HETATM 15 O O7 NAG . . . B 2 -3.924 7.612 12.693 1 39.99 ? O7 NAG 601 A 1 
HETATM 16 H H1 NAG . . . B 2 -4.907 4.588 10.017 1 37.29 ? H1 NAG 601 A 1 
HETATM 17 H H2 NAG . . . B 2 -4.313 5.251 12.928 1 32.16 ? H2 NAG 601 A 1 
HETATM 18 H H3 NAG . . . B 2 -3.232 3.535 10.675 1 32.13 ? H3 NAG 601 A 1 
HETATM 19 H H4 NAG . . . B 2 -4.561 2.887 13.316 1 32.51 ? H4 NAG 601 A 1 
HETATM 20 H H5 NAG . . . B 2 -5.516 2.631 10.435 1 38.64 ? H5 NAG 601 A 1 
HETATM 21 H H61 NAG . . . B 2 -7.302 1.529 11.158 1 37.83 ? H61 NAG 601 A 1 
HETATM 22 H H62 NAG . . . B 2 -7.598 2.732 12.423 1 37.83 ? H62 NAG 601 A 1 
HETATM 23 H H81 NAG . . . B 2 -2.393 9.159 11.622 1 32.43 ? H81 NAG 601 A 1 
HETATM 24 H H82 NAG . . . B 2 -1.436 7.872 10.976 1 32.43 ? H82 NAG 601 A 1 
HETATM 25 H H83 NAG . . . B 2 -2.835 8.422 10.121 1 32.43 ? H83 NAG 601 A 1 
HETATM 26 H HN2 NAG . . . B 2 -2.578 5.835 10.613 1 36.21 ? HN2 NAG 601 A 1 
HETATM 27 H HO1 NAG . . . B 2 -6.724 6.108 10.752 1 53.47 ? HO1 NAG 601 A 1 
HETATM 28 H HO3 NAG . . . B 2 -1.586 4.222 11.96 1 32.19 ? HO3 NAG 601 A 1 
HETATM 29 H HO4 NAG . . . B 2 -3.983 0.93 12.832 1 34.51 ? HO4 NAG 601 A 1 
HETATM 30 H HO6 NAG . . . B 2 -7.033 1.147 13.653 1 38.65 ? HO6 NAG 601 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           122 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           419 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           30 
#