data_7EC0 # _model_server_result.job_id zGkYFS7uk2QlQLRIMzByLg _model_server_result.datetime_utc '2024-10-20 19:10:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ec0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 7EC0 # _exptl.entry_id 7EC0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.376 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Methyl farnesoate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.5 _cell.angle_gamma 90 _cell.entry_id 7EC0 _cell.length_a 82.459 _cell.length_b 101.203 _cell.length_c 103.363 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EC0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,Q,R 1 1 C,F,K,L,S,V 2 1 D,E,M,N,O,P,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N # _chem_comp.formula 'C16 H26 O2' _chem_comp.formula_weight 250.376 _chem_comp.id J10 _chem_comp.mon_nstd_flag . _chem_comp.name 'Methyl farnesoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2E,6E)-Methyl 3,7,11-trimethyldodeca-2,6,10-trienoate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C4 J10 sing 173 n n C3 C4 J10 doub 174 z n C3 C2 J10 sing 175 n n O1 C2 J10 sing 176 n n O1 C1 J10 sing 177 n n C4 C6 J10 sing 178 n n C2 O2 J10 doub 179 n n C6 C7 J10 sing 180 n n C7 C8 J10 sing 181 n n C8 C9 J10 doub 182 e n C10 C9 J10 sing 183 n n C9 C11 J10 sing 184 n n C13 C12 J10 sing 185 n n C13 C14 J10 doub 186 n n C15 C14 J10 sing 187 n n C12 C11 J10 sing 188 n n C14 C16 J10 sing 189 n n C1 H3 J10 sing 190 n n C1 H1 J10 sing 191 n n C1 H2 J10 sing 192 n n C3 H4 J10 sing 193 n n C5 H7 J10 sing 194 n n C5 H5 J10 sing 195 n n C5 H6 J10 sing 196 n n C6 H8 J10 sing 197 n n C6 H9 J10 sing 198 n n C7 H10 J10 sing 199 n n C7 H11 J10 sing 200 n n C8 H12 J10 sing 201 n n C10 H15 J10 sing 202 n n C10 H13 J10 sing 203 n n C10 H14 J10 sing 204 n n C11 H16 J10 sing 205 n n C11 H17 J10 sing 206 n n C12 H19 J10 sing 207 n n C12 H18 J10 sing 208 n n C13 H20 J10 sing 209 n n C15 H23 J10 sing 210 n n C15 H21 J10 sing 211 n n C15 H22 J10 sing 212 n n C16 H25 J10 sing 213 n n C16 H26 J10 sing 214 n n C16 H24 J10 sing 215 n n # _atom_sites.entry_id 7EC0 _atom_sites.fract_transf_matrix[1][1] 0.012127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000742 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SAH A 1 301 1 SAH SAH . H 3 J10 A 1 302 1 J10 MeF . I 2 SAH D 1 301 1 SAH SAH . J 3 J10 D 1 302 1 J10 MeF . K 2 SAH G 1 301 1 SAH SAH . L 3 J10 G 1 302 1 J10 MeF . M 2 SAH J 1 301 1 SAH SAH . N 3 J10 J 1 302 1 J10 MeF . O 2 SAH M 1 301 1 SAH SAH . P 3 J10 M 1 302 1 J10 MeF . Q 4 HOH A 1 401 2 HOH HOH . Q 4 HOH A 2 402 12 HOH HOH . Q 4 HOH A 3 403 1 HOH HOH . Q 4 HOH A 4 404 13 HOH HOH . R 4 HOH D 1 401 3 HOH HOH . R 4 HOH D 2 402 5 HOH HOH . R 4 HOH D 3 403 7 HOH HOH . R 4 HOH D 4 404 6 HOH HOH . R 4 HOH D 5 405 4 HOH HOH . R 4 HOH D 6 406 9 HOH HOH . S 4 HOH G 1 401 15 HOH HOH . S 4 HOH G 2 402 11 HOH HOH . S 4 HOH G 3 403 8 HOH HOH . S 4 HOH G 4 404 10 HOH HOH . S 4 HOH G 5 405 14 HOH HOH . T 4 HOH J 1 401 16 HOH HOH . U 4 HOH M 1 401 17 HOH HOH . U 4 HOH M 2 402 18 HOH HOH . U 4 HOH M 3 403 20 HOH HOH . U 4 HOH M 4 404 19 HOH HOH . V 4 HOH P 1 301 23 HOH HOH . V 4 HOH P 2 302 24 HOH HOH . V 4 HOH P 3 303 22 HOH HOH . V 4 HOH P 4 304 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 J10 . . . H 3 30.605 -2.894 50.256 0.5 69.91 ? C1 J10 302 A 1 HETATM 2 O O1 J10 . . . H 3 31.169 -3.793 49.286 0.5 70.51 ? O1 J10 302 A 1 HETATM 3 C C2 J10 . . . H 3 30.977 -5.087 49.525 0.5 71.14 ? C2 J10 302 A 1 HETATM 4 O O2 J10 . . . H 3 30.401 -5.508 50.509 0.5 72.54 ? O2 J10 302 A 1 HETATM 5 C C3 J10 . . . H 3 31.531 -5.888 48.446 1 69.78 ? C3 J10 302 A 1 HETATM 6 C C4 J10 . . . H 3 31.895 -7.158 48.495 1 68.88 ? C4 J10 302 A 1 HETATM 7 C C5 J10 . . . H 3 31.62 -8.155 47.415 1 69.53 ? C5 J10 302 A 1 HETATM 8 C C6 J10 . . . H 3 32.693 -7.698 49.655 1 68.27 ? C6 J10 302 A 1 HETATM 9 C C7 J10 . . . H 3 33.592 -6.675 50.343 1 67.36 ? C7 J10 302 A 1 HETATM 10 C C8 J10 . . . H 3 32.936 -5.929 51.454 1 64.82 ? C8 J10 302 A 1 HETATM 11 C C9 J10 . . . H 3 32.363 -6.399 52.558 1 63.73 ? C9 J10 302 A 1 HETATM 12 C C10 J10 . . . H 3 31.41 -5.586 53.379 1 65.41 ? C10 J10 302 A 1 HETATM 13 C C11 J10 . . . H 3 32.642 -7.779 53.094 0.5 63.22 ? C11 J10 302 A 1 HETATM 14 C C12 J10 . . . H 3 33.897 -8.455 52.583 0.5 62.87 ? C12 J10 302 A 1 HETATM 15 C C13 J10 . . . H 3 34.153 -9.814 53.14 0.5 62.62 ? C13 J10 302 A 1 HETATM 16 C C14 J10 . . . H 3 33.549 -10.431 54.14 0.5 63.1 ? C14 J10 302 A 1 HETATM 17 C C15 J10 . . . H 3 33.809 -11.852 54.442 0.5 63.3 ? C15 J10 302 A 1 HETATM 18 C C16 J10 . . . H 3 32.586 -9.779 55.073 0.5 63.13 ? C16 J10 302 A 1 HETATM 19 H H3 J10 . . . H 3 30.796 -1.979 49.996 0.5 69.91 ? H3 J10 302 A 1 HETATM 20 H H1 J10 . . . H 3 30.995 -3.073 51.126 0.5 69.91 ? H1 J10 302 A 1 HETATM 21 H H2 J10 . . . H 3 29.645 -3.026 50.297 0.5 69.91 ? H2 J10 302 A 1 HETATM 22 H H4 J10 . . . H 3 31.643 -5.454 47.62 1 69.78 ? H4 J10 302 A 1 HETATM 23 H H7 J10 . . . H 3 32.458 -8.511 47.081 1 69.53 ? H7 J10 302 A 1 HETATM 24 H H5 J10 . . . H 3 31.141 -7.724 46.689 1 69.53 ? H5 J10 302 A 1 HETATM 25 H H6 J10 . . . H 3 31.081 -8.879 47.771 1 69.53 ? H6 J10 302 A 1 HETATM 26 H H8 J10 . . . H 3 33.254 -8.434 49.337 1 68.27 ? H8 J10 302 A 1 HETATM 27 H H9 J10 . . . H 3 32.075 -8.06 50.322 1 68.27 ? H9 J10 302 A 1 HETATM 28 H H10 J10 . . . H 3 33.904 -6.027 49.679 1 67.36 ? H10 J10 302 A 1 HETATM 29 H H11 J10 . . . H 3 34.379 -7.133 50.702 1 67.36 ? H11 J10 302 A 1 HETATM 30 H H12 J10 . . . H 3 32.924 -4.988 51.364 1 64.82 ? H12 J10 302 A 1 HETATM 31 H H15 J10 . . . H 3 30.55 -6.034 53.416 1 65.41 ? H15 J10 302 A 1 HETATM 32 H H13 J10 . . . H 3 31.3 -4.71 52.976 1 65.41 ? H13 J10 302 A 1 HETATM 33 H H14 J10 . . . H 3 31.76 -5.485 54.278 1 65.41 ? H14 J10 302 A 1 HETATM 34 H H16 J10 . . . H 3 31.886 -8.361 52.876 0.5 63.22 ? H16 J10 302 A 1 HETATM 35 H H17 J10 . . . H 3 32.711 -7.731 54.069 0.5 63.22 ? H17 J10 302 A 1 HETATM 36 H H19 J10 . . . H 3 33.843 -8.533 51.609 0.5 62.87 ? H19 J10 302 A 1 HETATM 37 H H18 J10 . . . H 3 34.67 -7.892 52.792 0.5 62.87 ? H18 J10 302 A 1 HETATM 38 H H20 J10 . . . H 3 34.843 -10.304 52.721 0.5 62.62 ? H20 J10 302 A 1 HETATM 39 H H23 J10 . . . H 3 34.16 -11.934 55.343 0.5 63.3 ? H23 J10 302 A 1 HETATM 40 H H21 J10 . . . H 3 34.457 -12.206 53.811 0.5 63.3 ? H21 J10 302 A 1 HETATM 41 H H22 J10 . . . H 3 32.983 -12.356 54.371 0.5 63.3 ? H22 J10 302 A 1 HETATM 42 H H25 J10 . . . H 3 32.922 -9.838 55.981 0.5 63.13 ? H25 J10 302 A 1 HETATM 43 H H26 J10 . . . H 3 31.727 -10.226 55.019 0.5 63.13 ? H26 J10 302 A 1 HETATM 44 H H24 J10 . . . H 3 32.478 -8.845 54.83 0.5 63.13 ? H24 J10 302 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #