data_7ECT
#
_model_server_result.job_id            MMK8gE2JbZl0sJwfsYRZ3Q 
_model_server_result.datetime_utc      '2024-11-06 00:30:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ect 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":504}' 
#
_entry.id    7ECT 
#
_exptl.entry_id    7ECT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ECT 
_cell.length_a            119.86 
_cell.length_b            153.09 
_cell.length_c            259.27 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ECT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -119.86 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 L N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7ECT 
_atom_sites.fract_transf_matrix[1][1]    0.008343 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003857 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 NDP A 1 501 1 NDP NDP . 
E 3 GOL A 1 502 2 GOL GOL . 
F 3 GOL A 1 503 4 GOL GOL . 
G 3 GOL A 1 504 12 GOL GOL . 
H 3 GOL A 1 505 13 GOL GOL . 
I 3 GOL A 1 506 14 GOL GOL . 
J 4 TLA A 1 507 1 TLA TLA . 
K 2 NDP B 1 501 2 NDP NDP . 
L 3 GOL B 1 502 5 GOL GOL . 
M 4 TLA B 1 503 2 TLA TLA . 
N 2 NDP C 1 501 3 NDP NDP . 
O 3 GOL C 1 502 1 GOL GOL . 
P 3 GOL C 1 503 3 GOL GOL . 
Q 3 GOL C 1 504 10 GOL GOL . 
R 3 GOL C 1 505 11 GOL GOL . 
S 3 GOL C 1 506 16 GOL GOL . 
T 3 GOL C 1 507 17 GOL GOL . 
U 4 TLA C 1 508 3 TLA TLA . 
V 5 HOH A 1 601 27 HOH HOH . 
V 5 HOH A 2 602 83 HOH HOH . 
V 5 HOH A 3 603 24 HOH HOH . 
V 5 HOH A 4 604 91 HOH HOH . 
V 5 HOH A 5 605 1 HOH HOH . 
V 5 HOH A 6 606 44 HOH HOH . 
V 5 HOH A 7 607 84 HOH HOH . 
V 5 HOH A 8 608 12 HOH HOH . 
V 5 HOH A 9 609 75 HOH HOH . 
V 5 HOH A 10 610 28 HOH HOH . 
V 5 HOH A 11 611 10 HOH HOH . 
V 5 HOH A 12 612 6 HOH HOH . 
V 5 HOH A 13 613 46 HOH HOH . 
V 5 HOH A 14 614 85 HOH HOH . 
V 5 HOH A 15 615 9 HOH HOH . 
V 5 HOH A 16 616 86 HOH HOH . 
V 5 HOH A 17 617 49 HOH HOH . 
V 5 HOH A 18 618 54 HOH HOH . 
V 5 HOH A 19 619 55 HOH HOH . 
W 5 HOH B 1 601 74 HOH HOH . 
W 5 HOH B 2 602 19 HOH HOH . 
W 5 HOH B 3 603 2 HOH HOH . 
W 5 HOH B 4 604 8 HOH HOH . 
W 5 HOH B 5 605 71 HOH HOH . 
W 5 HOH B 6 606 11 HOH HOH . 
W 5 HOH B 7 607 51 HOH HOH . 
W 5 HOH B 8 608 56 HOH HOH . 
W 5 HOH B 9 609 52 HOH HOH . 
W 5 HOH B 10 610 50 HOH HOH . 
W 5 HOH B 11 611 73 HOH HOH . 
W 5 HOH B 12 612 43 HOH HOH . 
W 5 HOH B 13 613 80 HOH HOH . 
W 5 HOH B 14 614 17 HOH HOH . 
W 5 HOH B 15 615 47 HOH HOH . 
W 5 HOH B 16 616 30 HOH HOH . 
W 5 HOH B 17 617 78 HOH HOH . 
W 5 HOH B 18 618 70 HOH HOH . 
W 5 HOH B 19 619 81 HOH HOH . 
W 5 HOH B 20 620 82 HOH HOH . 
W 5 HOH B 21 621 45 HOH HOH . 
W 5 HOH B 22 622 63 HOH HOH . 
W 5 HOH B 23 623 68 HOH HOH . 
W 5 HOH B 24 624 67 HOH HOH . 
W 5 HOH B 25 625 33 HOH HOH . 
W 5 HOH B 26 626 59 HOH HOH . 
W 5 HOH B 27 627 62 HOH HOH . 
W 5 HOH B 28 628 34 HOH HOH . 
W 5 HOH B 29 629 48 HOH HOH . 
W 5 HOH B 30 630 77 HOH HOH . 
W 5 HOH B 31 631 64 HOH HOH . 
W 5 HOH B 32 632 76 HOH HOH . 
W 5 HOH B 33 633 92 HOH HOH . 
W 5 HOH B 34 634 53 HOH HOH . 
W 5 HOH B 35 635 66 HOH HOH . 
W 5 HOH B 36 636 72 HOH HOH . 
W 5 HOH B 37 637 16 HOH HOH . 
W 5 HOH B 38 638 65 HOH HOH . 
W 5 HOH B 39 639 79 HOH HOH . 
W 5 HOH B 40 640 69 HOH HOH . 
X 5 HOH C 1 601 18 HOH HOH . 
X 5 HOH C 2 602 15 HOH HOH . 
X 5 HOH C 3 603 32 HOH HOH . 
X 5 HOH C 4 604 29 HOH HOH . 
X 5 HOH C 5 605 38 HOH HOH . 
X 5 HOH C 6 606 23 HOH HOH . 
X 5 HOH C 7 607 60 HOH HOH . 
X 5 HOH C 8 608 21 HOH HOH . 
X 5 HOH C 9 609 88 HOH HOH . 
X 5 HOH C 10 610 25 HOH HOH . 
X 5 HOH C 11 611 42 HOH HOH . 
X 5 HOH C 12 612 31 HOH HOH . 
X 5 HOH C 13 613 14 HOH HOH . 
X 5 HOH C 14 614 89 HOH HOH . 
X 5 HOH C 15 615 90 HOH HOH . 
X 5 HOH C 16 616 22 HOH HOH . 
X 5 HOH C 17 617 26 HOH HOH . 
X 5 HOH C 18 618 35 HOH HOH . 
X 5 HOH C 19 619 58 HOH HOH . 
X 5 HOH C 20 620 5 HOH HOH . 
X 5 HOH C 21 621 3 HOH HOH . 
X 5 HOH C 22 622 87 HOH HOH . 
X 5 HOH C 23 623 40 HOH HOH . 
X 5 HOH C 24 624 41 HOH HOH . 
X 5 HOH C 25 625 20 HOH HOH . 
X 5 HOH C 26 626 61 HOH HOH . 
X 5 HOH C 27 627 57 HOH HOH . 
X 5 HOH C 28 628 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . Q 3 -58.184 7.884 -42.1 1 65.24 ? C1 GOL 504 C 1 
HETATM 2 O O1 GOL . . . Q 3 -58.131 7.038 -40.928 1 61.87 ? O1 GOL 504 C 1 
HETATM 3 C C2 GOL . . . Q 3 -59.608 8.235 -42.597 1 63.72 ? C2 GOL 504 C 1 
HETATM 4 O O2 GOL . . . Q 3 -59.536 9.068 -43.777 1 60.92 ? O2 GOL 504 C 1 
HETATM 5 C C3 GOL . . . Q 3 -60.455 6.99 -42.912 1 59.98 ? C3 GOL 504 C 1 
HETATM 6 O O3 GOL . . . Q 3 -61.842 7.329 -43.05 1 52.9 ? O3 GOL 504 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#