data_7ED9 # _model_server_result.job_id Kc4rMyJkkAPEuoMbqTbr7g _model_server_result.datetime_utc '2024-10-20 03:55:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ed9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 7ED9 # _exptl.entry_id 7ED9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ED9 _cell.length_a 90.74 _cell.length_b 90.74 _cell.length_c 112.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ED9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 53 A ASN 32 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc2 A OD1 ASP 59 A ASP 38 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc3 A OD2 ASP 59 A ASP 38 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc4 A OD1 ASP 61 A ASP 40 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc5 A OD2 ASP 61 A ASP 40 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc6 C O2B ADP . A ADP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc7 C O2A ADP . A ADP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc8 C O2B ADP . A ADP 201 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc9 D MG MG . A MG 202 1_555 I O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc10 E MG MG . A MG 203 1_555 I O HOH . A HOH 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc11 E MG MG . A MG 203 1_555 I O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc12 E MG MG . A MG 203 1_555 I O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc13 B OD1 ASN 53 B ASN 32 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc14 B OD1 ASP 59 B ASP 38 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc15 B OD2 ASP 59 B ASP 38 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc16 B OD1 ASP 61 B ASP 40 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc17 B OD2 ASP 61 B ASP 40 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc18 F O1B ADP . B ADP 201 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc19 F O1A ADP . B ADP 201 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc20 F O1B ADP . B ADP 201 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc21 G MG MG . B MG 202 1_555 J O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc22 H MG MG . B MG 203 1_555 J O HOH . B HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc23 H MG MG . B MG 203 1_555 J O HOH . B HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc24 H MG MG . B MG 203 1_555 J O HOH . B HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ED9 _atom_sites.fract_transf_matrix[1][1] 0.01102 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01102 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 201 1 ADP ADP . D 3 MG A 1 202 1 MG MG . E 3 MG A 1 203 4 MG MG . F 2 ADP B 1 201 2 ADP ADP . G 3 MG B 1 202 2 MG MG . H 3 MG B 1 203 3 MG MG . I 4 HOH A 1 301 105 HOH HOH . I 4 HOH A 2 302 88 HOH HOH . I 4 HOH A 3 303 67 HOH HOH . I 4 HOH A 4 304 27 HOH HOH . I 4 HOH A 5 305 41 HOH HOH . I 4 HOH A 6 306 69 HOH HOH . I 4 HOH A 7 307 49 HOH HOH . I 4 HOH A 8 308 52 HOH HOH . I 4 HOH A 9 309 36 HOH HOH . I 4 HOH A 10 310 40 HOH HOH . I 4 HOH A 11 311 75 HOH HOH . I 4 HOH A 12 312 101 HOH HOH . I 4 HOH A 13 313 1 HOH HOH . I 4 HOH A 14 314 57 HOH HOH . I 4 HOH A 15 315 78 HOH HOH . I 4 HOH A 16 316 18 HOH HOH . I 4 HOH A 17 317 56 HOH HOH . I 4 HOH A 18 318 10 HOH HOH . I 4 HOH A 19 319 39 HOH HOH . I 4 HOH A 20 320 102 HOH HOH . I 4 HOH A 21 321 12 HOH HOH . I 4 HOH A 22 322 66 HOH HOH . I 4 HOH A 23 323 20 HOH HOH . I 4 HOH A 24 324 64 HOH HOH . I 4 HOH A 25 325 59 HOH HOH . I 4 HOH A 26 326 100 HOH HOH . I 4 HOH A 27 327 13 HOH HOH . I 4 HOH A 28 328 104 HOH HOH . I 4 HOH A 29 329 81 HOH HOH . I 4 HOH A 30 330 77 HOH HOH . I 4 HOH A 31 331 8 HOH HOH . I 4 HOH A 32 332 15 HOH HOH . I 4 HOH A 33 333 11 HOH HOH . I 4 HOH A 34 334 53 HOH HOH . I 4 HOH A 35 335 89 HOH HOH . I 4 HOH A 36 336 35 HOH HOH . I 4 HOH A 37 337 72 HOH HOH . I 4 HOH A 38 338 23 HOH HOH . I 4 HOH A 39 339 96 HOH HOH . I 4 HOH A 40 340 48 HOH HOH . I 4 HOH A 41 341 103 HOH HOH . I 4 HOH A 42 342 43 HOH HOH . I 4 HOH A 43 343 24 HOH HOH . I 4 HOH A 44 344 33 HOH HOH . I 4 HOH A 45 345 62 HOH HOH . I 4 HOH A 46 346 79 HOH HOH . I 4 HOH A 47 347 9 HOH HOH . I 4 HOH A 48 348 51 HOH HOH . I 4 HOH A 49 349 55 HOH HOH . I 4 HOH A 50 350 85 HOH HOH . I 4 HOH A 51 351 5 HOH HOH . I 4 HOH A 52 352 17 HOH HOH . I 4 HOH A 53 353 3 HOH HOH . I 4 HOH A 54 354 46 HOH HOH . I 4 HOH A 55 355 4 HOH HOH . I 4 HOH A 56 356 108 HOH HOH . I 4 HOH A 57 357 44 HOH HOH . I 4 HOH A 58 358 28 HOH HOH . I 4 HOH A 59 359 84 HOH HOH . I 4 HOH A 60 360 45 HOH HOH . I 4 HOH A 61 361 90 HOH HOH . I 4 HOH A 62 362 97 HOH HOH . I 4 HOH A 63 363 107 HOH HOH . I 4 HOH A 64 364 14 HOH HOH . I 4 HOH A 65 365 80 HOH HOH . I 4 HOH A 66 366 91 HOH HOH . I 4 HOH A 67 367 7 HOH HOH . J 4 HOH B 1 301 31 HOH HOH . J 4 HOH B 2 302 95 HOH HOH . J 4 HOH B 3 303 29 HOH HOH . J 4 HOH B 4 304 73 HOH HOH . J 4 HOH B 5 305 63 HOH HOH . J 4 HOH B 6 306 30 HOH HOH . J 4 HOH B 7 307 54 HOH HOH . J 4 HOH B 8 308 50 HOH HOH . J 4 HOH B 9 309 2 HOH HOH . J 4 HOH B 10 310 37 HOH HOH . J 4 HOH B 11 311 42 HOH HOH . J 4 HOH B 12 312 93 HOH HOH . J 4 HOH B 13 313 74 HOH HOH . J 4 HOH B 14 314 65 HOH HOH . J 4 HOH B 15 315 47 HOH HOH . J 4 HOH B 16 316 83 HOH HOH . J 4 HOH B 17 317 38 HOH HOH . J 4 HOH B 18 318 22 HOH HOH . J 4 HOH B 19 319 6 HOH HOH . J 4 HOH B 20 320 106 HOH HOH . J 4 HOH B 21 321 58 HOH HOH . J 4 HOH B 22 322 32 HOH HOH . J 4 HOH B 23 323 26 HOH HOH . J 4 HOH B 24 324 70 HOH HOH . J 4 HOH B 25 325 19 HOH HOH . J 4 HOH B 26 326 82 HOH HOH . J 4 HOH B 27 327 76 HOH HOH . J 4 HOH B 28 328 98 HOH HOH . J 4 HOH B 29 329 60 HOH HOH . J 4 HOH B 30 330 94 HOH HOH . J 4 HOH B 31 331 61 HOH HOH . J 4 HOH B 32 332 16 HOH HOH . J 4 HOH B 33 333 99 HOH HOH . J 4 HOH B 34 334 71 HOH HOH . J 4 HOH B 35 335 87 HOH HOH . J 4 HOH B 36 336 86 HOH HOH . J 4 HOH B 37 337 34 HOH HOH . J 4 HOH B 38 338 25 HOH HOH . J 4 HOH B 39 339 92 HOH HOH . J 4 HOH B 40 340 68 HOH HOH . J 4 HOH B 41 341 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 32.403 _atom_site.Cartn_y -14.532 _atom_site.Cartn_z 18.341 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #