data_7EEE # _model_server_result.job_id LdnHTkpMP4LEoPW8ppRgkw _model_server_result.datetime_utc '2024-10-11 07:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7eee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7EEE # _exptl.entry_id 7EEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EEE _cell.length_a 63.354 _cell.length_b 63.354 _cell.length_c 137.962 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 BMA _pdbx_entity_branch_link.comp_id_2 BMA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BMA 1 B 1 BMA B 2 BMA 2 n B BMA 2 B 2 BMA B 1 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 10 1_555 A SG CYS 39 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 B O6 BMA . B BMA 1 1_555 B C1 BMA . B BMA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 153 n n C1 C2 GOL sing 154 n n C1 H11 GOL sing 155 n n C1 H12 GOL sing 156 n n O1 HO1 GOL sing 157 n n C2 O2 GOL sing 158 n n C2 C3 GOL sing 159 n n C2 H2 GOL sing 160 n n O2 HO2 GOL sing 161 n n C3 O3 GOL sing 162 n n C3 H31 GOL sing 163 n n C3 H32 GOL sing 164 n n O3 HO3 GOL sing 165 n n # _atom_sites.entry_id 7EEE _atom_sites.fract_transf_matrix[1][1] 0.015784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 301 1 GOL GOL . D 4 HOH A 1 401 105 HOH HOH . D 4 HOH A 2 402 24 HOH HOH . D 4 HOH A 3 403 71 HOH HOH . D 4 HOH A 4 404 170 HOH HOH . D 4 HOH A 5 405 4 HOH HOH . D 4 HOH A 6 406 135 HOH HOH . D 4 HOH A 7 407 209 HOH HOH . D 4 HOH A 8 408 51 HOH HOH . D 4 HOH A 9 409 18 HOH HOH . D 4 HOH A 10 410 119 HOH HOH . D 4 HOH A 11 411 122 HOH HOH . D 4 HOH A 12 412 200 HOH HOH . D 4 HOH A 13 413 34 HOH HOH . D 4 HOH A 14 414 165 HOH HOH . D 4 HOH A 15 415 55 HOH HOH . D 4 HOH A 16 416 101 HOH HOH . D 4 HOH A 17 417 132 HOH HOH . D 4 HOH A 18 418 35 HOH HOH . D 4 HOH A 19 419 110 HOH HOH . D 4 HOH A 20 420 98 HOH HOH . D 4 HOH A 21 421 141 HOH HOH . D 4 HOH A 22 422 121 HOH HOH . D 4 HOH A 23 423 90 HOH HOH . D 4 HOH A 24 424 63 HOH HOH . D 4 HOH A 25 425 128 HOH HOH . D 4 HOH A 26 426 153 HOH HOH . D 4 HOH A 27 427 186 HOH HOH . D 4 HOH A 28 428 87 HOH HOH . D 4 HOH A 29 429 169 HOH HOH . D 4 HOH A 30 430 57 HOH HOH . D 4 HOH A 31 431 115 HOH HOH . D 4 HOH A 32 432 227 HOH HOH . D 4 HOH A 33 433 21 HOH HOH . D 4 HOH A 34 434 161 HOH HOH . D 4 HOH A 35 435 197 HOH HOH . D 4 HOH A 36 436 178 HOH HOH . D 4 HOH A 37 437 74 HOH HOH . D 4 HOH A 38 438 147 HOH HOH . D 4 HOH A 39 439 12 HOH HOH . D 4 HOH A 40 440 15 HOH HOH . D 4 HOH A 41 441 79 HOH HOH . D 4 HOH A 42 442 23 HOH HOH . D 4 HOH A 43 443 53 HOH HOH . D 4 HOH A 44 444 13 HOH HOH . D 4 HOH A 45 445 134 HOH HOH . D 4 HOH A 46 446 206 HOH HOH . D 4 HOH A 47 447 37 HOH HOH . D 4 HOH A 48 448 114 HOH HOH . D 4 HOH A 49 449 5 HOH HOH . D 4 HOH A 50 450 195 HOH HOH . D 4 HOH A 51 451 123 HOH HOH . D 4 HOH A 52 452 33 HOH HOH . D 4 HOH A 53 453 162 HOH HOH . D 4 HOH A 54 454 107 HOH HOH . D 4 HOH A 55 455 236 HOH HOH . D 4 HOH A 56 456 116 HOH HOH . D 4 HOH A 57 457 25 HOH HOH . D 4 HOH A 58 458 54 HOH HOH . D 4 HOH A 59 459 42 HOH HOH . D 4 HOH A 60 460 89 HOH HOH . D 4 HOH A 61 461 188 HOH HOH . D 4 HOH A 62 462 139 HOH HOH . D 4 HOH A 63 463 76 HOH HOH . D 4 HOH A 64 464 82 HOH HOH . D 4 HOH A 65 465 99 HOH HOH . D 4 HOH A 66 466 7 HOH HOH . D 4 HOH A 67 467 27 HOH HOH . D 4 HOH A 68 468 49 HOH HOH . D 4 HOH A 69 469 1 HOH HOH . D 4 HOH A 70 470 92 HOH HOH . D 4 HOH A 71 471 151 HOH HOH . D 4 HOH A 72 472 8 HOH HOH . D 4 HOH A 73 473 148 HOH HOH . D 4 HOH A 74 474 95 HOH HOH . D 4 HOH A 75 475 160 HOH HOH . D 4 HOH A 76 476 10 HOH HOH . D 4 HOH A 77 477 72 HOH HOH . D 4 HOH A 78 478 230 HOH HOH . D 4 HOH A 79 479 28 HOH HOH . D 4 HOH A 80 480 69 HOH HOH . D 4 HOH A 81 481 46 HOH HOH . D 4 HOH A 82 482 84 HOH HOH . D 4 HOH A 83 483 3 HOH HOH . D 4 HOH A 84 484 137 HOH HOH . D 4 HOH A 85 485 2 HOH HOH . D 4 HOH A 86 486 204 HOH HOH . D 4 HOH A 87 487 59 HOH HOH . D 4 HOH A 88 488 81 HOH HOH . D 4 HOH A 89 489 20 HOH HOH . D 4 HOH A 90 490 36 HOH HOH . D 4 HOH A 91 491 104 HOH HOH . D 4 HOH A 92 492 203 HOH HOH . D 4 HOH A 93 493 140 HOH HOH . D 4 HOH A 94 494 131 HOH HOH . D 4 HOH A 95 495 45 HOH HOH . D 4 HOH A 96 496 112 HOH HOH . D 4 HOH A 97 497 228 HOH HOH . D 4 HOH A 98 498 38 HOH HOH . D 4 HOH A 99 499 6 HOH HOH . D 4 HOH A 100 500 219 HOH HOH . D 4 HOH A 101 501 155 HOH HOH . D 4 HOH A 102 502 109 HOH HOH . D 4 HOH A 103 503 14 HOH HOH . D 4 HOH A 104 504 149 HOH HOH . D 4 HOH A 105 505 88 HOH HOH . D 4 HOH A 106 506 19 HOH HOH . D 4 HOH A 107 507 100 HOH HOH . D 4 HOH A 108 508 223 HOH HOH . D 4 HOH A 109 509 31 HOH HOH . D 4 HOH A 110 510 62 HOH HOH . D 4 HOH A 111 511 60 HOH HOH . D 4 HOH A 112 512 179 HOH HOH . D 4 HOH A 113 513 113 HOH HOH . D 4 HOH A 114 514 118 HOH HOH . D 4 HOH A 115 515 130 HOH HOH . D 4 HOH A 116 516 61 HOH HOH . D 4 HOH A 117 517 93 HOH HOH . D 4 HOH A 118 518 214 HOH HOH . D 4 HOH A 119 519 174 HOH HOH . D 4 HOH A 120 520 145 HOH HOH . D 4 HOH A 121 521 73 HOH HOH . D 4 HOH A 122 522 30 HOH HOH . D 4 HOH A 123 523 191 HOH HOH . D 4 HOH A 124 524 106 HOH HOH . D 4 HOH A 125 525 156 HOH HOH . D 4 HOH A 126 526 68 HOH HOH . D 4 HOH A 127 527 70 HOH HOH . D 4 HOH A 128 528 75 HOH HOH . D 4 HOH A 129 529 48 HOH HOH . D 4 HOH A 130 530 150 HOH HOH . D 4 HOH A 131 531 41 HOH HOH . D 4 HOH A 132 532 144 HOH HOH . D 4 HOH A 133 533 192 HOH HOH . D 4 HOH A 134 534 213 HOH HOH . D 4 HOH A 135 535 199 HOH HOH . D 4 HOH A 136 536 58 HOH HOH . D 4 HOH A 137 537 43 HOH HOH . D 4 HOH A 138 538 126 HOH HOH . D 4 HOH A 139 539 29 HOH HOH . D 4 HOH A 140 540 159 HOH HOH . D 4 HOH A 141 541 66 HOH HOH . D 4 HOH A 142 542 80 HOH HOH . D 4 HOH A 143 543 94 HOH HOH . D 4 HOH A 144 544 50 HOH HOH . D 4 HOH A 145 545 56 HOH HOH . D 4 HOH A 146 546 52 HOH HOH . D 4 HOH A 147 547 39 HOH HOH . D 4 HOH A 148 548 138 HOH HOH . D 4 HOH A 149 549 47 HOH HOH . D 4 HOH A 150 550 124 HOH HOH . D 4 HOH A 151 551 9 HOH HOH . D 4 HOH A 152 552 17 HOH HOH . D 4 HOH A 153 553 32 HOH HOH . D 4 HOH A 154 554 85 HOH HOH . D 4 HOH A 155 555 22 HOH HOH . D 4 HOH A 156 556 11 HOH HOH . D 4 HOH A 157 557 173 HOH HOH . D 4 HOH A 158 558 208 HOH HOH . D 4 HOH A 159 559 120 HOH HOH . D 4 HOH A 160 560 231 HOH HOH . D 4 HOH A 161 561 83 HOH HOH . D 4 HOH A 162 562 16 HOH HOH . D 4 HOH A 163 563 185 HOH HOH . D 4 HOH A 164 564 212 HOH HOH . D 4 HOH A 165 565 44 HOH HOH . D 4 HOH A 166 566 125 HOH HOH . D 4 HOH A 167 567 163 HOH HOH . D 4 HOH A 168 568 198 HOH HOH . D 4 HOH A 169 569 127 HOH HOH . D 4 HOH A 170 570 215 HOH HOH . D 4 HOH A 171 571 86 HOH HOH . D 4 HOH A 172 572 129 HOH HOH . D 4 HOH A 173 573 216 HOH HOH . D 4 HOH A 174 574 172 HOH HOH . D 4 HOH A 175 575 226 HOH HOH . D 4 HOH A 176 576 64 HOH HOH . D 4 HOH A 177 577 184 HOH HOH . D 4 HOH A 178 578 171 HOH HOH . D 4 HOH A 179 579 133 HOH HOH . D 4 HOH A 180 580 201 HOH HOH . D 4 HOH A 181 581 205 HOH HOH . D 4 HOH A 182 582 136 HOH HOH . D 4 HOH A 183 583 238 HOH HOH . D 4 HOH A 184 584 152 HOH HOH . D 4 HOH A 185 585 217 HOH HOH . D 4 HOH A 186 586 202 HOH HOH . D 4 HOH A 187 587 187 HOH HOH . D 4 HOH A 188 588 182 HOH HOH . D 4 HOH A 189 589 193 HOH HOH . D 4 HOH A 190 590 225 HOH HOH . D 4 HOH A 191 591 229 HOH HOH . D 4 HOH A 192 592 166 HOH HOH . D 4 HOH A 193 593 40 HOH HOH . D 4 HOH A 194 594 235 HOH HOH . D 4 HOH A 195 595 221 HOH HOH . D 4 HOH A 196 596 167 HOH HOH . D 4 HOH A 197 597 67 HOH HOH . D 4 HOH A 198 598 220 HOH HOH . D 4 HOH A 199 599 210 HOH HOH . D 4 HOH A 200 600 211 HOH HOH . D 4 HOH A 201 601 97 HOH HOH . D 4 HOH A 202 602 196 HOH HOH . D 4 HOH A 203 603 176 HOH HOH . D 4 HOH A 204 604 96 HOH HOH . D 4 HOH A 205 605 194 HOH HOH . D 4 HOH A 206 606 65 HOH HOH . D 4 HOH A 207 607 177 HOH HOH . D 4 HOH A 208 608 91 HOH HOH . D 4 HOH A 209 609 111 HOH HOH . D 4 HOH A 210 610 103 HOH HOH . D 4 HOH A 211 611 158 HOH HOH . D 4 HOH A 212 612 146 HOH HOH . D 4 HOH A 213 613 232 HOH HOH . D 4 HOH A 214 614 181 HOH HOH . D 4 HOH A 215 615 143 HOH HOH . D 4 HOH A 216 616 190 HOH HOH . D 4 HOH A 217 617 183 HOH HOH . D 4 HOH A 218 618 154 HOH HOH . D 4 HOH A 219 619 233 HOH HOH . D 4 HOH A 220 620 157 HOH HOH . D 4 HOH A 221 621 189 HOH HOH . D 4 HOH A 222 622 222 HOH HOH . D 4 HOH A 223 623 237 HOH HOH . D 4 HOH A 224 624 175 HOH HOH . D 4 HOH A 225 625 207 HOH HOH . D 4 HOH A 226 626 108 HOH HOH . D 4 HOH A 227 627 218 HOH HOH . D 4 HOH A 228 628 26 HOH HOH . D 4 HOH A 229 629 142 HOH HOH . D 4 HOH A 230 630 234 HOH HOH . D 4 HOH A 231 631 224 HOH HOH . D 4 HOH A 232 632 180 HOH HOH . D 4 HOH A 233 633 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 2.58 15.217 2.216 1 29.53 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . C 3 1.282 15.29 1.684 1 31.18 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . C 3 2.969 16.562 2.815 1 27.12 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . C 3 2.176 16.879 3.943 1 23.04 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . C 3 2.858 17.629 1.736 1 27.43 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . C 3 3.67 17.168 0.684 1 24.56 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #