data_7EEK
#
_model_server_result.job_id            Cki3OclMKUmd3qL4Q5gTbw 
_model_server_result.datetime_utc      '2024-11-13 04:49:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7eek 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":604}' 
#
_entry.id    7EEK 
#
_exptl.entry_id    7EEK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              254.408 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITOLEIC ACID' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         105.21 
_cell.angle_beta          89.68 
_cell.angle_gamma         100.1 
_cell.entry_id            7EEK 
_cell.length_a            38.187 
_cell.length_b            92.207 
_cell.length_c            95.435 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EEK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I 1 1 
B,J,K,L,M,N,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 A CYS 53 1_555 A SG CYS 61 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 A SG CYS 74 A CYS 75 1_555 A SG CYS 90 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf3 A SG CYS 89 A CYS 90 1_555 A SG CYS 100 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf4 A SG CYS 123 A CYS 124 1_555 A SG CYS 168 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf5 A SG CYS 167 A CYS 168 1_555 A SG CYS 176 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf6 A SG CYS 199 A CYS 200 1_555 A SG CYS 245 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf7 A SG CYS 244 A CYS 245 1_555 A SG CYS 252 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 A SG CYS 264 A CYS 265 1_555 A SG CYS 278 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf9 A SG CYS 277 A CYS 278 1_555 A SG CYS 288 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf10 A SG CYS 315 A CYS 316 1_555 A SG CYS 360 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf11 A SG CYS 359 A CYS 360 1_555 A SG CYS 368 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf12 A SG CYS 391 A CYS 392 1_555 A SG CYS 437 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf13 A SG CYS 436 A CYS 437 1_555 A SG CYS 447 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf14 A SG CYS 460 A CYS 461 1_555 A SG CYS 476 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf15 A SG CYS 475 A CYS 476 1_555 A SG CYS 486 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf16 A SG CYS 513 A CYS 514 1_555 A SG CYS 558 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf17 A SG CYS 557 A CYS 558 1_555 A SG CYS 566 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf18 B SG CYS 52 B CYS 53 1_555 B SG CYS 61 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf19 B SG CYS 74 B CYS 75 1_555 B SG CYS 90 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf20 B SG CYS 89 B CYS 90 1_555 B SG CYS 100 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf21 B SG CYS 123 B CYS 124 1_555 B SG CYS 168 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf22 B SG CYS 167 B CYS 168 1_555 B SG CYS 176 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf23 B SG CYS 199 B CYS 200 1_555 B SG CYS 245 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf24 B SG CYS 244 B CYS 245 1_555 B SG CYS 252 B CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
disulf ? disulf25 B SG CYS 264 B CYS 265 1_555 B SG CYS 278 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf26 B SG CYS 277 B CYS 278 1_555 B SG CYS 288 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf27 B SG CYS 315 B CYS 316 1_555 B SG CYS 360 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
disulf ? disulf28 B SG CYS 359 B CYS 360 1_555 B SG CYS 368 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf29 B SG CYS 391 B CYS 392 1_555 B SG CYS 437 B CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf30 B SG CYS 436 B CYS 437 1_555 B SG CYS 447 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf31 B SG CYS 460 B CYS 461 1_555 B SG CYS 476 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf32 B SG CYS 475 B CYS 476 1_555 B SG CYS 486 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf33 B SG CYS 513 B CYS 514 1_555 B SG CYS 558 B CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf34 B SG CYS 557 B CYS 558 1_555 B SG CYS 566 B CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc1 A NE2 HIS 145 A HIS 146 1_555 I AU1 J2O . A J2O 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc2 B NE2 HIS 145 B HIS 146 1_555 P AU1 J2O . B J2O 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
#
_chem_comp.formula           'C16 H30 O2' 
_chem_comp.formula_weight    254.408 
_chem_comp.id                PAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITOLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PAM sing 262 n n 
C1 O2 PAM doub 263 n n 
C1 C2 PAM sing 264 n n 
O1 HO1 PAM sing 265 n n 
C2 C3 PAM sing 266 n n 
C2 H21 PAM sing 267 n n 
C2 H22 PAM sing 268 n n 
C3 C4 PAM sing 269 n n 
C3 H31 PAM sing 270 n n 
C3 H32 PAM sing 271 n n 
C4 C5 PAM sing 272 n n 
C4 H41 PAM sing 273 n n 
C4 H42 PAM sing 274 n n 
C5 C6 PAM sing 275 n n 
C5 H51 PAM sing 276 n n 
C5 H52 PAM sing 277 n n 
C6 C7 PAM sing 278 n n 
C6 H61 PAM sing 279 n n 
C6 H62 PAM sing 280 n n 
C7 C8 PAM sing 281 n n 
C7 H71 PAM sing 282 n n 
C7 H72 PAM sing 283 n n 
C8 C9 PAM sing 284 n n 
C8 H81 PAM sing 285 n n 
C8 H82 PAM sing 286 n n 
C9 C10 PAM doub 287 z n 
C9 H9 PAM sing 288 n n 
C10 C11 PAM sing 289 n n 
C10 H10 PAM sing 290 n n 
C11 C12 PAM sing 291 n n 
C11 H111 PAM sing 292 n n 
C11 H112 PAM sing 293 n n 
C12 C13 PAM sing 294 n n 
C12 H121 PAM sing 295 n n 
C12 H122 PAM sing 296 n n 
C13 C14 PAM sing 297 n n 
C13 H131 PAM sing 298 n n 
C13 H132 PAM sing 299 n n 
C14 C15 PAM sing 300 n n 
C14 H141 PAM sing 301 n n 
C14 H142 PAM sing 302 n n 
C15 C16 PAM sing 303 n n 
C15 H151 PAM sing 304 n n 
C15 H152 PAM sing 305 n n 
C16 H161 PAM sing 306 n n 
C16 H162 PAM sing 307 n n 
C16 H163 PAM sing 308 n n 
#
_atom_sites.entry_id                     7EEK 
_atom_sites.fract_transf_matrix[1][1]    0.026187 
_atom_sites.fract_transf_matrix[1][2]    0.004665 
_atom_sites.fract_transf_matrix[1][3]    0.001133 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011016 
_atom_sites.fract_transf_matrix[2][3]    0.003034 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010869 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PAM A 1 601 1 PAM PAL . 
D 2 PAM A 1 602 2 PAM PAL . 
E 2 PAM A 1 603 3 PAM PAL . 
F 2 PAM A 1 604 4 PAM PAL . 
G 2 PAM A 1 605 5 PAM PAL . 
H 2 PAM A 1 606 8 PAM PAL . 
I 3 J2O A 1 607 1 J2O HAU . 
J 2 PAM B 1 601 7 PAM PAL . 
K 2 PAM B 1 602 9 PAM PAL . 
L 2 PAM B 1 603 10 PAM PAL . 
M 2 PAM B 1 604 11 PAM PAL . 
N 2 PAM B 1 605 12 PAM PAL . 
O 2 PAM B 1 606 13 PAM PAL . 
P 3 J2O B 1 607 2 J2O HAU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PAM . . . F 2 -2.884 16.158 11.972 1 44.58 ? C1 PAM 604 A 1 
HETATM 2 O O1 PAM . . . F 2 -2.117 15.747 11.012 1 38 ? O1 PAM 604 A 1 
HETATM 3 O O2 PAM . . . F 2 -2.445 17.007 12.836 1 40.55 ? O2 PAM 604 A 1 
HETATM 4 C C2 PAM . . . F 2 -4.177 15.425 12.296 1 42.75 ? C2 PAM 604 A 1 
HETATM 5 C C3 PAM . . . F 2 -5.262 15.084 11.288 1 44.76 ? C3 PAM 604 A 1 
HETATM 6 C C4 PAM . . . F 2 -5.26 13.822 10.425 1 43.02 ? C4 PAM 604 A 1 
HETATM 7 C C5 PAM . . . F 2 -6.544 13.154 10.091 1 41.67 ? C5 PAM 604 A 1 
HETATM 8 C C6 PAM . . . F 2 -7.454 12.759 11.247 1 44.2 ? C6 PAM 604 A 1 
HETATM 9 C C7 PAM . . . F 2 -7.882 11.324 11.403 1 43.63 ? C7 PAM 604 A 1 
HETATM 10 C C8 PAM . . . F 2 -8.141 10.789 12.791 1 41.45 ? C8 PAM 604 A 1 
HETATM 11 C C9 PAM . . . F 2 -6.957 10.161 13.507 1 41.58 ? C9 PAM 604 A 1 
HETATM 12 C C10 PAM . . . F 2 -7.071 8.845 14.237 1 41.24 ? C10 PAM 604 A 1 
HETATM 13 C C11 PAM . . . F 2 -8.328 8.559 15.043 1 41.33 ? C11 PAM 604 A 1 
HETATM 14 C C12 PAM . . . F 2 -8.957 9.655 15.882 1 40.61 ? C12 PAM 604 A 1 
HETATM 15 C C13 PAM . . . F 2 -8.858 9.581 17.383 1 39.28 ? C13 PAM 604 A 1 
HETATM 16 C C14 PAM . . . F 2 -10.073 9.835 18.215 1 37.09 ? C14 PAM 604 A 1 
HETATM 17 C C15 PAM . . . F 2 -10.027 9.474 19.654 1 35.6 ? C15 PAM 604 A 1 
HETATM 18 C C16 PAM . . . F 2 -8.698 9.295 20.312 1 35.72 ? C16 PAM 604 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           18 
#