data_7EF3 # _model_server_result.job_id scHJUMEUYwTLQlIs4loW_Q _model_server_result.datetime_utc '2024-10-19 09:24:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ef3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7EF3 # _exptl.entry_id 7EF3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EF3 _cell.length_a 64.906 _cell.length_b 67.37 _cell.length_c 80.251 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EF3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ARG 8 P ARG 8 1_555 C N MLY 9 P MLY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 D C ARG 8 Q ARG 8 1_555 D N MLY 9 Q MLY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A SG CYS 74 A CYS 198 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc2 A NE2 HIS 108 A HIS 232 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 A SG CYS 113 A CYS 237 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc4 A SG CYS 115 A CYS 239 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc5 B SG CYS 74 B CYS 198 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc6 B NE2 HIS 108 B HIS 232 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc7 B SG CYS 113 B CYS 237 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc8 B SG CYS 115 B CYS 239 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7EF3 _atom_sites.fract_transf_matrix[1][1] 0.015407 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014843 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 501 501 ZN ZN . F 3 ZN B 1 501 501 ZN ZN . G 4 HOH A 1 601 96 HOH HOH . G 4 HOH A 2 602 20 HOH HOH . G 4 HOH A 3 603 25 HOH HOH . G 4 HOH A 4 604 7 HOH HOH . G 4 HOH A 5 605 85 HOH HOH . G 4 HOH A 6 606 42 HOH HOH . G 4 HOH A 7 607 66 HOH HOH . G 4 HOH A 8 608 5 HOH HOH . G 4 HOH A 9 609 45 HOH HOH . G 4 HOH A 10 610 1 HOH HOH . G 4 HOH A 11 611 29 HOH HOH . G 4 HOH A 12 612 53 HOH HOH . G 4 HOH A 13 613 37 HOH HOH . G 4 HOH A 14 614 33 HOH HOH . G 4 HOH A 15 615 79 HOH HOH . G 4 HOH A 16 616 35 HOH HOH . G 4 HOH A 17 617 17 HOH HOH . G 4 HOH A 18 618 80 HOH HOH . G 4 HOH A 19 619 9 HOH HOH . G 4 HOH A 20 620 27 HOH HOH . G 4 HOH A 21 621 18 HOH HOH . G 4 HOH A 22 622 31 HOH HOH . G 4 HOH A 23 623 52 HOH HOH . G 4 HOH A 24 624 86 HOH HOH . G 4 HOH A 25 625 23 HOH HOH . G 4 HOH A 26 626 4 HOH HOH . G 4 HOH A 27 627 64 HOH HOH . G 4 HOH A 28 628 41 HOH HOH . G 4 HOH A 29 629 2 HOH HOH . G 4 HOH A 30 630 48 HOH HOH . G 4 HOH A 31 631 24 HOH HOH . G 4 HOH A 32 632 39 HOH HOH . G 4 HOH A 33 633 19 HOH HOH . G 4 HOH A 34 634 95 HOH HOH . G 4 HOH A 35 635 34 HOH HOH . G 4 HOH A 36 636 30 HOH HOH . G 4 HOH A 37 637 91 HOH HOH . G 4 HOH A 38 638 71 HOH HOH . G 4 HOH A 39 639 76 HOH HOH . G 4 HOH A 40 640 67 HOH HOH . G 4 HOH A 41 641 75 HOH HOH . G 4 HOH A 42 642 73 HOH HOH . G 4 HOH A 43 643 43 HOH HOH . G 4 HOH A 44 644 99 HOH HOH . G 4 HOH A 45 645 88 HOH HOH . G 4 HOH A 46 646 58 HOH HOH . G 4 HOH A 47 647 92 HOH HOH . G 4 HOH A 48 648 68 HOH HOH . G 4 HOH A 49 649 70 HOH HOH . G 4 HOH A 50 650 55 HOH HOH . G 4 HOH A 51 651 46 HOH HOH . G 4 HOH A 52 652 51 HOH HOH . G 4 HOH A 53 653 15 HOH HOH . G 4 HOH A 54 654 82 HOH HOH . G 4 HOH A 55 655 98 HOH HOH . G 4 HOH A 56 656 97 HOH HOH . G 4 HOH A 57 657 56 HOH HOH . G 4 HOH A 58 658 44 HOH HOH . H 4 HOH B 1 601 47 HOH HOH . H 4 HOH B 2 602 13 HOH HOH . H 4 HOH B 3 603 21 HOH HOH . H 4 HOH B 4 604 78 HOH HOH . H 4 HOH B 5 605 84 HOH HOH . H 4 HOH B 6 606 77 HOH HOH . H 4 HOH B 7 607 32 HOH HOH . H 4 HOH B 8 608 57 HOH HOH . H 4 HOH B 9 609 60 HOH HOH . H 4 HOH B 10 610 11 HOH HOH . H 4 HOH B 11 611 14 HOH HOH . H 4 HOH B 12 612 65 HOH HOH . H 4 HOH B 13 613 10 HOH HOH . H 4 HOH B 14 614 89 HOH HOH . H 4 HOH B 15 615 8 HOH HOH . H 4 HOH B 16 616 16 HOH HOH . H 4 HOH B 17 617 22 HOH HOH . H 4 HOH B 18 618 72 HOH HOH . H 4 HOH B 19 619 12 HOH HOH . H 4 HOH B 20 620 93 HOH HOH . H 4 HOH B 21 621 3 HOH HOH . H 4 HOH B 22 622 40 HOH HOH . H 4 HOH B 23 623 6 HOH HOH . H 4 HOH B 24 624 38 HOH HOH . H 4 HOH B 25 625 62 HOH HOH . H 4 HOH B 26 626 54 HOH HOH . H 4 HOH B 27 627 28 HOH HOH . H 4 HOH B 28 628 81 HOH HOH . H 4 HOH B 29 629 59 HOH HOH . H 4 HOH B 30 630 49 HOH HOH . H 4 HOH B 31 631 90 HOH HOH . H 4 HOH B 32 632 63 HOH HOH . H 4 HOH B 33 633 61 HOH HOH . H 4 HOH B 34 634 69 HOH HOH . H 4 HOH B 35 635 100 HOH HOH . H 4 HOH B 36 636 74 HOH HOH . H 4 HOH B 37 637 36 HOH HOH . I 4 HOH P 1 101 50 HOH HOH . I 4 HOH P 2 102 26 HOH HOH . I 4 HOH P 3 103 87 HOH HOH . I 4 HOH P 4 104 94 HOH HOH . I 4 HOH P 5 105 83 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.481 _atom_site.Cartn_y 14.303 _atom_site.Cartn_z 9.951 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #