data_7EFJ # _model_server_result.job_id uSBqJ_t_j7QLWU0UMR_hrg _model_server_result.datetime_utc '2024-11-23 01:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7efj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7EFJ # _exptl.entry_id 7EFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.814 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-(2-chloroacetyl)-4-(furan-2-ylmethyl)-1-thia-4,8-diazaspiro[4.5]decan-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7EFJ _cell.length_a 68.177 _cell.length_b 68.177 _cell.length_c 79.724 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 133 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 113 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C19 _struct_conn.ptnr2_label_comp_id J2C _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id J2C _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.839 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H17 Cl N2 O3 S' _chem_comp.formula_weight 328.814 _chem_comp.id J2C _chem_comp.mon_nstd_flag . _chem_comp.name 8-(2-chloroacetyl)-4-(furan-2-ylmethyl)-1-thia-4,8-diazaspiro[4.5]decan-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 C08 J2C doub 173 n n C09 C08 J2C sing 174 n n C09 S10 J2C sing 175 n n C08 N07 J2C sing 176 n n C05 C06 J2C sing 177 n n C05 C04 J2C sing 178 n n C06 N01 J2C sing 179 n n N07 C12 J2C sing 180 n n N07 C04 J2C sing 181 n n C12 C13 J2C sing 182 n n S10 C04 J2C sing 183 n n C04 C03 J2C sing 184 n n O20 C18 J2C doub 185 n n C14 C13 J2C doub 186 n y C14 C15 J2C sing 187 n y C13 O17 J2C sing 188 n y N01 C18 J2C sing 189 n n N01 C02 J2C sing 190 n n C18 C19 J2C sing 191 n n C03 C02 J2C sing 192 n n C15 C16 J2C doub 193 n y O17 C16 J2C sing 194 n y C12 H1 J2C sing 195 n n C12 H2 J2C sing 196 n n C02 H3 J2C sing 197 n n C02 H4 J2C sing 198 n n C03 H5 J2C sing 199 n n C03 H6 J2C sing 200 n n C05 H7 J2C sing 201 n n C05 H8 J2C sing 202 n n C06 H9 J2C sing 203 n n C06 H10 J2C sing 204 n n C09 H11 J2C sing 205 n n C09 H12 J2C sing 206 n n C14 H13 J2C sing 207 n n C15 H14 J2C sing 208 n n C16 H15 J2C sing 209 n n C19 H16 J2C sing 210 n n C19 H17 J2C sing 211 n n C19 CL1 J2C sing 212 n n # _atom_sites.entry_id 7EFJ _atom_sites.fract_transf_matrix[1][1] 0.014668 _atom_sites.fract_transf_matrix[1][2] 0.008468 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J2C A 1 201 1 J2C P01 . C 3 PE8 A 1 202 1 PE8 PE8 . D 4 HOH A 1 301 8 HOH HOH . D 4 HOH A 2 302 19 HOH HOH . D 4 HOH A 3 303 4 HOH HOH . D 4 HOH A 4 304 55 HOH HOH . D 4 HOH A 5 305 21 HOH HOH . D 4 HOH A 6 306 16 HOH HOH . D 4 HOH A 7 307 47 HOH HOH . D 4 HOH A 8 308 15 HOH HOH . D 4 HOH A 9 309 3 HOH HOH . D 4 HOH A 10 310 56 HOH HOH . D 4 HOH A 11 311 27 HOH HOH . D 4 HOH A 12 312 39 HOH HOH . D 4 HOH A 13 313 23 HOH HOH . D 4 HOH A 14 314 12 HOH HOH . D 4 HOH A 15 315 12 HOH HOH . D 4 HOH A 16 316 30 HOH HOH . D 4 HOH A 17 317 61 HOH HOH . D 4 HOH A 18 318 63 HOH HOH . D 4 HOH A 19 319 3 HOH HOH . D 4 HOH A 20 320 69 HOH HOH . D 4 HOH A 21 321 25 HOH HOH . D 4 HOH A 22 322 68 HOH HOH . D 4 HOH A 23 323 43 HOH HOH . D 4 HOH A 24 324 46 HOH HOH . D 4 HOH A 25 325 10 HOH HOH . D 4 HOH A 26 326 107 HOH HOH . D 4 HOH A 27 327 5 HOH HOH . D 4 HOH A 28 328 2 HOH HOH . D 4 HOH A 29 329 28 HOH HOH . D 4 HOH A 30 330 1 HOH HOH . D 4 HOH A 31 331 26 HOH HOH . D 4 HOH A 32 332 19 HOH HOH . D 4 HOH A 33 333 20 HOH HOH . D 4 HOH A 34 334 24 HOH HOH . D 4 HOH A 35 335 108 HOH HOH . D 4 HOH A 36 336 32 HOH HOH . D 4 HOH A 37 337 9 HOH HOH . D 4 HOH A 38 338 14 HOH HOH . D 4 HOH A 39 339 53 HOH HOH . D 4 HOH A 40 340 10 HOH HOH . D 4 HOH A 41 341 6 HOH HOH . D 4 HOH A 42 342 13 HOH HOH . D 4 HOH A 43 343 42 HOH HOH . D 4 HOH A 44 344 23 HOH HOH . D 4 HOH A 45 345 57 HOH HOH . D 4 HOH A 46 346 79 HOH HOH . D 4 HOH A 47 347 17 HOH HOH . D 4 HOH A 48 348 63 HOH HOH . D 4 HOH A 49 349 92 HOH HOH . D 4 HOH A 50 350 37 HOH HOH . D 4 HOH A 51 351 73 HOH HOH . D 4 HOH A 52 352 18 HOH HOH . D 4 HOH A 53 353 35 HOH HOH . D 4 HOH A 54 354 1 HOH HOH . D 4 HOH A 55 355 37 HOH HOH . D 4 HOH A 56 356 68 HOH HOH . D 4 HOH A 57 357 7 HOH HOH . D 4 HOH A 58 358 103 HOH HOH . D 4 HOH A 59 359 31 HOH HOH . D 4 HOH A 60 360 8 HOH HOH . D 4 HOH A 61 361 5 HOH HOH . D 4 HOH A 62 362 36 HOH HOH . D 4 HOH A 63 363 4 HOH HOH . D 4 HOH A 64 364 82 HOH HOH . D 4 HOH A 65 365 40 HOH HOH . D 4 HOH A 66 366 60 HOH HOH . D 4 HOH A 67 367 25 HOH HOH . D 4 HOH A 68 368 67 HOH HOH . D 4 HOH A 69 369 59 HOH HOH . D 4 HOH A 70 370 95 HOH HOH . D 4 HOH A 71 371 29 HOH HOH . D 4 HOH A 72 372 41 HOH HOH . D 4 HOH A 73 373 38 HOH HOH . D 4 HOH A 74 374 50 HOH HOH . D 4 HOH A 75 375 86 HOH HOH . D 4 HOH A 76 376 54 HOH HOH . D 4 HOH A 77 377 3 HOH HOH . D 4 HOH A 78 378 67 HOH HOH . D 4 HOH A 79 379 69 HOH HOH . D 4 HOH A 80 380 64 HOH HOH . D 4 HOH A 81 381 53 HOH HOH . D 4 HOH A 82 382 57 HOH HOH . D 4 HOH A 83 383 110 HOH HOH . D 4 HOH A 84 384 65 HOH HOH . D 4 HOH A 85 385 61 HOH HOH . D 4 HOH A 86 386 70 HOH HOH . D 4 HOH A 87 387 64 HOH HOH . D 4 HOH A 88 388 85 HOH HOH . D 4 HOH A 89 389 66 HOH HOH . D 4 HOH A 90 390 56 HOH HOH . D 4 HOH A 91 391 54 HOH HOH . D 4 HOH A 92 392 78 HOH HOH . D 4 HOH A 93 393 72 HOH HOH . D 4 HOH A 94 394 60 HOH HOH . D 4 HOH A 95 395 112 HOH HOH . D 4 HOH A 96 396 29 HOH HOH . D 4 HOH A 97 397 69 HOH HOH . D 4 HOH A 98 398 62 HOH HOH . D 4 HOH A 99 399 58 HOH HOH . D 4 HOH A 100 400 52 HOH HOH . D 4 HOH A 101 401 50 HOH HOH . D 4 HOH A 102 402 115 HOH HOH . D 4 HOH A 103 403 109 HOH HOH . D 4 HOH A 104 404 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 J2C . . . B 2 -8.264 41.29 81.293 1 44.38 ? C12 J2C 201 A 1 HETATM 2 N N01 J2C . . . B 2 -4.397 43.761 82.564 1 31.82 ? N01 J2C 201 A 1 HETATM 3 C C02 J2C . . . B 2 -4.739 42.697 83.51 1 31.9 ? C02 J2C 201 A 1 HETATM 4 C C03 J2C . . . B 2 -5.947 41.962 83.008 1 31.5 ? C03 J2C 201 A 1 HETATM 5 C C04 J2C . . . B 2 -5.746 41.464 81.606 1 31.19 ? C04 J2C 201 A 1 HETATM 6 C C05 J2C . . . B 2 -5.524 42.609 80.652 1 29.46 ? C05 J2C 201 A 1 HETATM 7 C C06 J2C . . . B 2 -4.384 43.473 81.083 1 31.54 ? C06 J2C 201 A 1 HETATM 8 N N07 J2C . . . B 2 -6.899 40.705 81.128 1 32.03 ? N07 J2C 201 A 1 HETATM 9 C C08 J2C . . . B 2 -6.604 39.593 80.493 1 32.02 ? C08 J2C 201 A 1 HETATM 10 C C09 J2C . . . B 2 -5.101 39.198 80.395 1 31.41 ? C09 J2C 201 A 1 HETATM 11 S S10 J2C . . . B 2 -4.342 40.299 81.53 1 32.01 ? S10 J2C 201 A 1 HETATM 12 O O11 J2C . . . B 2 -7.428 38.86 80.046 1 32.1 ? O11 J2C 201 A 1 HETATM 13 C C13 J2C . . . B 2 -9.11 40.807 82.445 1 51.04 ? C13 J2C 201 A 1 HETATM 14 C C14 J2C . . . B 2 -9.992 39.713 82.428 1 59.33 ? C14 J2C 201 A 1 HETATM 15 C C15 J2C . . . B 2 -10.592 39.62 83.688 1 64.2 ? C15 J2C 201 A 1 HETATM 16 C C16 J2C . . . B 2 -10.105 40.661 84.475 1 60.39 ? C16 J2C 201 A 1 HETATM 17 O O17 J2C . . . B 2 -9.206 41.4 83.701 1 63.47 ? O17 J2C 201 A 1 HETATM 18 C C18 J2C . . . B 2 -4.035 44.955 82.997 1 31.06 ? C18 J2C 201 A 1 HETATM 19 C C19 J2C . . . B 2 -3.916 45.245 84.475 1 34.64 ? C19 J2C 201 A 1 HETATM 20 O O20 J2C . . . B 2 -3.668 45.804 82.243 1 34.37 ? O20 J2C 201 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #