data_7EG4
#
_model_server_result.job_id            AEtY7kTETiuqJga8vBbScw 
_model_server_result.datetime_utc      '2024-12-21 13:27:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7eg4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1201}' 
#
_entry.id    7EG4 
#
_exptl.entry_id    7EG4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              287.315 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Parvine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EG4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EG4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 380 D CYS 381 1_555 B SG CYS 410 D CYS 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 D SG CYS 380 B CYS 381 1_555 D SG CYS 410 B CYS 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc1 A OD2 ASP 169 C ASP 837 1_555 F MG MG . C MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc2 A OD1 ASP 282 C ASP 950 1_555 F MG MG . C MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc3 B ND1 HIS 274 D HIS 275 1_555 H ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc4 B SG CYS 276 D CYS 277 1_555 H ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc5 B SG CYS 310 D CYS 311 1_555 H ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc6 B SG CYS 311 D CYS 312 1_555 H ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc7 C OD2 ASP 169 A ASP 837 1_555 J MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc8 C OD1 ASP 282 A ASP 950 1_555 J MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc9 D ND1 HIS 274 B HIS 275 1_555 L ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc10 D SG CYS 276 B CYS 277 1_555 L ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc11 D SG CYS 310 B CYS 311 1_555 L ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc12 D SG CYS 311 B CYS 312 1_555 L ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
#
_chem_comp.formula           'C18 H13 N3 O' 
_chem_comp.formula_weight    287.315 
_chem_comp.id                J36 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Parvine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 J36 doub 171 n y 
C15 C13 J36 sing 172 n y 
C14 C12 J36 sing 173 n y 
C13 C7 J36 doub 174 n y 
C12 C6 J36 doub 175 n y 
C7 C6 J36 sing 176 n y 
C7 N2 J36 sing 177 n y 
C6 C1 J36 sing 178 n y 
N2 C3 J36 sing 179 n y 
C1 C3 J36 doub 180 n y 
C1 C2 J36 sing 181 n n 
C3 C5 J36 sing 182 n n 
C8 C5 J36 doub 183 n n 
C8 C10 J36 sing 184 n n 
C16 C10 J36 doub 185 n y 
C16 C18 J36 sing 186 n y 
C2 C4 J36 sing 187 n n 
C5 N1 J36 sing 188 n n 
C10 C11 J36 sing 189 n y 
C18 N3 J36 doub 190 n y 
N1 C9 J36 sing 191 n n 
N1 C4 J36 sing 192 n n 
C11 C17 J36 doub 193 n y 
C11 C9 J36 sing 194 n n 
N3 C17 J36 sing 195 n y 
C9 O1 J36 doub 196 n n 
C2 H2 J36 sing 197 n n 
C2 H1 J36 sing 198 n n 
C4 H4 J36 sing 199 n n 
C4 H3 J36 sing 200 n n 
N2 H5 J36 sing 201 n n 
C8 H6 J36 sing 202 n n 
C12 H7 J36 sing 203 n n 
C13 H8 J36 sing 204 n n 
C14 H9 J36 sing 205 n n 
C15 H10 J36 sing 206 n n 
C16 H11 J36 sing 207 n n 
C17 H12 J36 sing 208 n n 
C18 H13 J36 sing 209 n n 
#
_atom_sites.entry_id                     7EG4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 J36 C 1 1201 1201 J36 NAU . 
F 4 MG C 1 1202 1 MG MG . 
G 4 MG C 1 1203 2 MG MG . 
H 5 ZN D 1 601 3 ZN ZN . 
I 3 J36 A 1 1201 1201 J36 NAU . 
J 4 MG A 1 1202 1 MG MG . 
K 4 MG A 1 1203 2 MG MG . 
L 5 ZN B 1 601 3 ZN ZN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 J36 . . . E 3 121.043 126.236 81.262 1 0 ? C1 J36 1201 C 1 
HETATM 2 C C2 J36 . . . E 3 121.11 127.695 81.523 1 0 ? C2 J36 1201 C 1 
HETATM 3 C C3 J36 . . . E 3 122.196 125.485 81.292 1 0 ? C3 J36 1201 C 1 
HETATM 4 C C4 J36 . . . E 3 122.318 127.997 82.432 1 0 ? C4 J36 1201 C 1 
HETATM 5 C C5 J36 . . . E 3 123.501 125.967 81.572 1 0 ? C5 J36 1201 C 1 
HETATM 6 N N2 J36 . . . E 3 121.866 124.187 81.016 1 0 ? N2 J36 1201 C 1 
HETATM 7 C C10 J36 . . . E 3 125.92 125.813 81.589 1 0 ? C10 J36 1201 C 1 
HETATM 8 C C11 J36 . . . E 3 126.022 127.108 82.097 1 0 ? C11 J36 1201 C 1 
HETATM 9 C C6 J36 . . . E 3 119.962 125.372 80.948 1 0 ? C6 J36 1201 C 1 
HETATM 10 C C7 J36 . . . E 3 120.505 124.091 80.8 1 0 ? C7 J36 1201 C 1 
HETATM 11 C C8 J36 . . . E 3 124.602 125.241 81.324 1 0 ? C8 J36 1201 C 1 
HETATM 12 C C9 J36 . . . E 3 124.799 127.896 82.379 1 0 ? C9 J36 1201 C 1 
HETATM 13 O O1 J36 . . . E 3 124.918 129.021 82.861 1 0 ? O1 J36 1201 C 1 
HETATM 14 N N1 J36 . . . E 3 123.572 127.279 82.077 1 0 ? N1 J36 1201 C 1 
HETATM 15 N N3 J36 . . . E 3 128.432 126.947 82.103 1 0 ? N3 J36 1201 C 1 
HETATM 16 C C12 J36 . . . E 3 118.575 125.545 80.773 1 0 ? C12 J36 1201 C 1 
HETATM 17 C C13 J36 . . . E 3 119.722 122.974 80.486 1 0 ? C13 J36 1201 C 1 
HETATM 18 C C14 J36 . . . E 3 117.781 124.436 80.459 1 0 ? C14 J36 1201 C 1 
HETATM 19 C C15 J36 . . . E 3 118.349 123.171 80.319 1 0 ? C15 J36 1201 C 1 
HETATM 20 C C16 J36 . . . E 3 127.083 125.089 81.338 1 0 ? C16 J36 1201 C 1 
HETATM 21 C C17 J36 . . . E 3 127.288 127.627 82.336 1 0 ? C17 J36 1201 C 1 
HETATM 22 C C18 J36 . . . E 3 128.301 125.696 81.611 1 0 ? C18 J36 1201 C 1 
HETATM 23 H H2 J36 . . . E 3 120.19 128.06 81.993 1 0 ? H2 J36 1201 C 1 
HETATM 24 H H1 J36 . . . E 3 121.232 128.22 80.568 1 0 ? H1 J36 1201 C 1 
HETATM 25 H H4 J36 . . . E 3 122.088 127.703 83.466 1 0 ? H4 J36 1201 C 1 
HETATM 26 H H3 J36 . . . E 3 122.502 129.077 82.446 1 0 ? H3 J36 1201 C 1 
HETATM 27 H H5 J36 . . . E 3 122.505 123.405 80.978 1 0 ? H5 J36 1201 C 1 
HETATM 28 H H6 J36 . . . E 3 124.568 124.238 80.913 1 0 ? H6 J36 1201 C 1 
HETATM 29 H H7 J36 . . . E 3 118.118 126.525 80.881 1 0 ? H7 J36 1201 C 1 
HETATM 30 H H8 J36 . . . E 3 120.162 121.988 80.376 1 0 ? H8 J36 1201 C 1 
HETATM 31 H H9 J36 . . . E 3 116.711 124.564 80.324 1 0 ? H9 J36 1201 C 1 
HETATM 32 H H10 J36 . . . E 3 117.714 122.322 80.074 1 0 ? H10 J36 1201 C 1 
HETATM 33 H H11 J36 . . . E 3 127.055 124.08 80.942 1 0 ? H11 J36 1201 C 1 
HETATM 34 H H12 J36 . . . E 3 127.435 128.627 82.732 1 0 ? H12 J36 1201 C 1 
HETATM 35 H H13 J36 . . . E 3 129.233 125.171 81.431 1 0 ? H13 J36 1201 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#