data_7EI0 # _model_server_result.job_id XzHG3nFHwErQLU8-sRq5jQ _model_server_result.datetime_utc '2025-01-22 20:08:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ei0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 7EI0 # _exptl.entry_id 7EI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EI0 _cell.length_a 115.55 _cell.length_b 115.55 _cell.length_c 240.891 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,O 1 1 B,L,M,N,P 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_454 x-1/2,-y+1/2,-z-1/4 1 0 0 0 -1 0 0 0 -1 -57.775 57.775 -60.22275 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 39 A CYS 39 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 73 A CYS 73 1_555 A SG CYS 114 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 99 A CYS 99 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 168 A CYS 168 1_555 A SG CYS 229 A CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf5 B SG CYS 39 B CYS 39 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 B SG CYS 73 B CYS 73 1_555 B SG CYS 114 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf7 B SG CYS 99 B CYS 99 1_555 B SG CYS 119 B CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 A C SER 41 A SER 41 1_555 A N YCM 42 A YCM 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C YCM 42 A YCM 42 1_555 A N TRP 43 A TRP 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 B C SER 41 B SER 41 1_555 B N YCM 42 B YCM 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 B C YCM 42 B YCM 42 1_555 B N TRP 43 B TRP 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? metalc ? metalc1 A O VAL 33 A VAL 33 1_555 J NA NA . A NA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.088 ? metalc ? metalc2 B OD1 ASP 91 B ASP 91 1_555 N NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.132 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 246 n n C1 C2 PGE sing 247 n n C1 H1 PGE sing 248 n n C1 H12 PGE sing 249 n n O1 HO1 PGE sing 250 n n C2 O2 PGE sing 251 n n C2 H2 PGE sing 252 n n C2 H22 PGE sing 253 n n O2 C3 PGE sing 254 n n C3 C4 PGE sing 255 n n C3 H3 PGE sing 256 n n C3 H32 PGE sing 257 n n C4 O3 PGE sing 258 n n C4 H4 PGE sing 259 n n C4 H42 PGE sing 260 n n O4 C6 PGE sing 261 n n O4 HO4 PGE sing 262 n n C6 C5 PGE sing 263 n n C6 H6 PGE sing 264 n n C6 H62 PGE sing 265 n n C5 O3 PGE sing 266 n n C5 H5 PGE sing 267 n n C5 H52 PGE sing 268 n n # _atom_sites.entry_id 7EI0 _atom_sites.fract_transf_matrix[1][1] 0.008654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 301 1 PGE PGE . D 2 PGE A 1 302 2 PGE PGE . E 2 PGE A 1 303 4 PGE PGE . F 3 SO4 A 1 304 1 SO4 SO4 . G 3 SO4 A 1 305 2 SO4 SO4 . H 4 EDO A 1 306 1 EDO EDO . I 4 EDO A 1 307 2 EDO EDO . J 5 NA A 1 308 1 NA NA . K 6 CL A 1 309 1 CL CL . L 2 PGE B 1 301 3 PGE PGE . M 4 EDO B 1 302 3 EDO EDO . N 5 NA B 1 303 2 NA NA . O 7 HOH A 1 401 20 HOH HOH . O 7 HOH A 2 402 49 HOH HOH . O 7 HOH A 3 403 45 HOH HOH . O 7 HOH A 4 404 29 HOH HOH . O 7 HOH A 5 405 43 HOH HOH . O 7 HOH A 6 406 32 HOH HOH . O 7 HOH A 7 407 24 HOH HOH . O 7 HOH A 8 408 46 HOH HOH . O 7 HOH A 9 409 52 HOH HOH . O 7 HOH A 10 410 11 HOH HOH . O 7 HOH A 11 411 9 HOH HOH . O 7 HOH A 12 412 30 HOH HOH . O 7 HOH A 13 413 15 HOH HOH . O 7 HOH A 14 414 37 HOH HOH . O 7 HOH A 15 415 21 HOH HOH . O 7 HOH A 16 416 10 HOH HOH . O 7 HOH A 17 417 42 HOH HOH . O 7 HOH A 18 418 39 HOH HOH . O 7 HOH A 19 419 6 HOH HOH . O 7 HOH A 20 420 2 HOH HOH . O 7 HOH A 21 421 19 HOH HOH . O 7 HOH A 22 422 50 HOH HOH . O 7 HOH A 23 423 17 HOH HOH . O 7 HOH A 24 424 28 HOH HOH . O 7 HOH A 25 425 8 HOH HOH . O 7 HOH A 26 426 48 HOH HOH . O 7 HOH A 27 427 36 HOH HOH . O 7 HOH A 28 428 4 HOH HOH . O 7 HOH A 29 429 33 HOH HOH . O 7 HOH A 30 430 44 HOH HOH . O 7 HOH A 31 431 7 HOH HOH . O 7 HOH A 32 432 5 HOH HOH . O 7 HOH A 33 433 12 HOH HOH . O 7 HOH A 34 434 25 HOH HOH . O 7 HOH A 35 435 18 HOH HOH . O 7 HOH A 36 436 31 HOH HOH . O 7 HOH A 37 437 38 HOH HOH . O 7 HOH A 38 438 51 HOH HOH . O 7 HOH A 39 439 35 HOH HOH . O 7 HOH A 40 440 26 HOH HOH . O 7 HOH A 41 441 22 HOH HOH . O 7 HOH A 42 442 34 HOH HOH . O 7 HOH A 43 443 1 HOH HOH . O 7 HOH A 44 444 53 HOH HOH . O 7 HOH A 45 445 27 HOH HOH . P 7 HOH B 1 401 14 HOH HOH . P 7 HOH B 2 402 16 HOH HOH . P 7 HOH B 3 403 47 HOH HOH . P 7 HOH B 4 404 13 HOH HOH . P 7 HOH B 5 405 3 HOH HOH . P 7 HOH B 6 406 40 HOH HOH . P 7 HOH B 7 407 23 HOH HOH . P 7 HOH B 8 408 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 2 -13.111 12.468 -40.278 1 170.58 ? C1 PGE 302 A 1 HETATM 2 O O1 PGE . . . D 2 -14.254 11.8 -39.781 1 170.61 ? O1 PGE 302 A 1 HETATM 3 C C2 PGE . . . D 2 -12.998 13.808 -39.591 1 167.73 ? C2 PGE 302 A 1 HETATM 4 O O2 PGE . . . D 2 -11.898 14.456 -40.191 1 167.35 ? O2 PGE 302 A 1 HETATM 5 C C3 PGE . . . D 2 -10.748 14.376 -39.367 1 172.67 ? C3 PGE 302 A 1 HETATM 6 C C4 PGE . . . D 2 -9.661 13.484 -39.933 1 178.15 ? C4 PGE 302 A 1 HETATM 7 O O4 PGE . . . D 2 -6.1 14.857 -36.962 1 189.95 ? O4 PGE 302 A 1 HETATM 8 C C6 PGE . . . D 2 -6.789 13.757 -37.564 1 191.11 ? C6 PGE 302 A 1 HETATM 9 C C5 PGE . . . D 2 -7.965 14.215 -38.429 1 183.67 ? C5 PGE 302 A 1 HETATM 10 O O3 PGE . . . D 2 -8.81 13.142 -38.853 1 184.4 ? O3 PGE 302 A 1 HETATM 11 H H1 PGE . . . D 2 -12.189 11.901 -40.083 1 112.96 ? H1 PGE 302 A 1 HETATM 12 H H12 PGE . . . D 2 -13.177 12.64 -41.363 1 112.96 ? H12 PGE 302 A 1 HETATM 13 H HO1 PGE . . . D 2 -14.624 11.27 -40.498 1 115.08 ? HO1 PGE 302 A 1 HETATM 14 H H2 PGE . . . D 2 -13.931 14.383 -39.725 1 110.2 ? H2 PGE 302 A 1 HETATM 15 H H22 PGE . . . D 2 -12.846 13.667 -38.507 1 110.2 ? H22 PGE 302 A 1 HETATM 16 H H3 PGE . . . D 2 -10.318 15.381 -39.222 1 110.42 ? H3 PGE 302 A 1 HETATM 17 H H32 PGE . . . D 2 -11.024 13.983 -38.374 1 110.42 ? H32 PGE 302 A 1 HETATM 18 H H4 PGE . . . D 2 -10.114 12.586 -40.389 1 114.56 ? H4 PGE 302 A 1 HETATM 19 H H42 PGE . . . D 2 -9.111 14.022 -40.725 1 114.56 ? H42 PGE 302 A 1 HETATM 20 H HO4 PGE . . . D 2 -6.59 15.119 -36.173 1 119.4 ? HO4 PGE 302 A 1 HETATM 21 H H6 PGE . . . D 2 -7.19 13.077 -36.794 1 121.02 ? H6 PGE 302 A 1 HETATM 22 H H62 PGE . . . D 2 -6.111 13.175 -38.21 1 121.02 ? H62 PGE 302 A 1 HETATM 23 H H5 PGE . . . D 2 -7.553 14.742 -39.306 1 116.64 ? H5 PGE 302 A 1 HETATM 24 H H52 PGE . . . D 2 -8.548 14.947 -37.844 1 116.64 ? H52 PGE 302 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 24 #