data_7EIC
#
_model_server_result.job_id            GjglLYXBZtO41yMNJsoYkQ 
_model_server_result.datetime_utc      '2024-11-22 16:19:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7eic 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":202}' 
#
_entry.id    7EIC 
#
_exptl.entry_id    7EIC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.3 
_cell.angle_beta          74.81 
_cell.angle_gamma         89.87 
_cell.entry_id            7EIC 
_cell.length_a            30.367 
_cell.length_b            51.702 
_cell.length_c            56.273 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EIC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,K,L 1 1 
C,G,H,I,J,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 G N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 4 C GLY 4 1_555 A N ALY 5 C ALY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C ALY 5 C ALY 5 1_555 A N GLY 6 C GLY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C GLY 7 C GLY 7 1_555 A N ALY 8 C ALY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C ALY 8 C ALY 8 1_555 A N GLY 9 C GLY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 157 n n 
C1 C2 GOL sing 158 n n 
C1 H11 GOL sing 159 n n 
C1 H12 GOL sing 160 n n 
O1 HO1 GOL sing 161 n n 
C2 O2 GOL sing 162 n n 
C2 C3 GOL sing 163 n n 
C2 H2 GOL sing 164 n n 
O2 HO2 GOL sing 165 n n 
C3 O3 GOL sing 166 n n 
C3 H31 GOL sing 167 n n 
C3 H32 GOL sing 168 n n 
O3 HO3 GOL sing 169 n n 
#
_atom_sites.entry_id                     7EIC 
_atom_sites.fract_transf_matrix[1][1]    0.03293 
_atom_sites.fract_transf_matrix[1][2]    -0.000074 
_atom_sites.fract_transf_matrix[1][3]    -0.008942 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019342 
_atom_sites.fract_transf_matrix[2][3]    -0.000233 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018415 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 GOL A 1 201 1 GOL GOL . 
E 3 GOL A 1 202 3 GOL GOL . 
F 4 PEG A 1 203 2 PEG PEG . 
G 3 GOL B 1 201 5 GOL GOL . 
H 3 GOL B 1 202 6 GOL GOL . 
I 4 PEG B 1 203 1 PEG PEG . 
J 4 PEG B 1 204 3 PEG PEG . 
K 5 HOH C 1 101 66 HOH HOH . 
K 5 HOH C 2 102 119 HOH HOH . 
K 5 HOH C 3 103 81 HOH HOH . 
K 5 HOH C 4 104 146 HOH HOH . 
L 5 HOH A 1 301 39 HOH HOH . 
L 5 HOH A 2 302 44 HOH HOH . 
L 5 HOH A 3 303 12 HOH HOH . 
L 5 HOH A 4 304 115 HOH HOH . 
L 5 HOH A 5 305 107 HOH HOH . 
L 5 HOH A 6 306 54 HOH HOH . 
L 5 HOH A 7 307 72 HOH HOH . 
L 5 HOH A 8 308 137 HOH HOH . 
L 5 HOH A 9 309 88 HOH HOH . 
L 5 HOH A 10 310 90 HOH HOH . 
L 5 HOH A 11 311 61 HOH HOH . 
L 5 HOH A 12 312 32 HOH HOH . 
L 5 HOH A 13 313 31 HOH HOH . 
L 5 HOH A 14 314 129 HOH HOH . 
L 5 HOH A 15 315 93 HOH HOH . 
L 5 HOH A 16 316 16 HOH HOH . 
L 5 HOH A 17 317 77 HOH HOH . 
L 5 HOH A 18 318 4 HOH HOH . 
L 5 HOH A 19 319 104 HOH HOH . 
L 5 HOH A 20 320 56 HOH HOH . 
L 5 HOH A 21 321 154 HOH HOH . 
L 5 HOH A 22 322 113 HOH HOH . 
L 5 HOH A 23 323 153 HOH HOH . 
L 5 HOH A 24 324 8 HOH HOH . 
L 5 HOH A 25 325 60 HOH HOH . 
L 5 HOH A 26 326 132 HOH HOH . 
L 5 HOH A 27 327 126 HOH HOH . 
L 5 HOH A 28 328 116 HOH HOH . 
L 5 HOH A 29 329 55 HOH HOH . 
L 5 HOH A 30 330 84 HOH HOH . 
L 5 HOH A 31 331 41 HOH HOH . 
L 5 HOH A 32 332 53 HOH HOH . 
L 5 HOH A 33 333 155 HOH HOH . 
L 5 HOH A 34 334 14 HOH HOH . 
L 5 HOH A 35 335 99 HOH HOH . 
L 5 HOH A 36 336 11 HOH HOH . 
L 5 HOH A 37 337 5 HOH HOH . 
L 5 HOH A 38 338 18 HOH HOH . 
L 5 HOH A 39 339 45 HOH HOH . 
L 5 HOH A 40 340 83 HOH HOH . 
L 5 HOH A 41 341 147 HOH HOH . 
L 5 HOH A 42 342 128 HOH HOH . 
L 5 HOH A 43 343 6 HOH HOH . 
L 5 HOH A 44 344 37 HOH HOH . 
L 5 HOH A 45 345 135 HOH HOH . 
L 5 HOH A 46 346 71 HOH HOH . 
L 5 HOH A 47 347 89 HOH HOH . 
L 5 HOH A 48 348 157 HOH HOH . 
L 5 HOH A 49 349 108 HOH HOH . 
L 5 HOH A 50 350 25 HOH HOH . 
L 5 HOH A 51 351 59 HOH HOH . 
L 5 HOH A 52 352 70 HOH HOH . 
L 5 HOH A 53 353 133 HOH HOH . 
L 5 HOH A 54 354 15 HOH HOH . 
L 5 HOH A 55 355 158 HOH HOH . 
L 5 HOH A 56 356 82 HOH HOH . 
L 5 HOH A 57 357 156 HOH HOH . 
L 5 HOH A 58 358 130 HOH HOH . 
L 5 HOH A 59 359 3 HOH HOH . 
L 5 HOH A 60 360 10 HOH HOH . 
L 5 HOH A 61 361 131 HOH HOH . 
L 5 HOH A 62 362 159 HOH HOH . 
L 5 HOH A 63 363 24 HOH HOH . 
L 5 HOH A 64 364 98 HOH HOH . 
L 5 HOH A 65 365 36 HOH HOH . 
L 5 HOH A 66 366 112 HOH HOH . 
L 5 HOH A 67 367 151 HOH HOH . 
L 5 HOH A 68 368 142 HOH HOH . 
M 5 HOH B 1 301 46 HOH HOH . 
M 5 HOH B 2 302 20 HOH HOH . 
M 5 HOH B 3 303 38 HOH HOH . 
M 5 HOH B 4 304 48 HOH HOH . 
M 5 HOH B 5 305 110 HOH HOH . 
M 5 HOH B 6 306 34 HOH HOH . 
M 5 HOH B 7 307 21 HOH HOH . 
M 5 HOH B 8 308 139 HOH HOH . 
M 5 HOH B 9 309 62 HOH HOH . 
M 5 HOH B 10 310 94 HOH HOH . 
M 5 HOH B 11 311 95 HOH HOH . 
M 5 HOH B 12 312 29 HOH HOH . 
M 5 HOH B 13 313 127 HOH HOH . 
M 5 HOH B 14 314 28 HOH HOH . 
M 5 HOH B 15 315 79 HOH HOH . 
M 5 HOH B 16 316 63 HOH HOH . 
M 5 HOH B 17 317 75 HOH HOH . 
M 5 HOH B 18 318 51 HOH HOH . 
M 5 HOH B 19 319 64 HOH HOH . 
M 5 HOH B 20 320 152 HOH HOH . 
M 5 HOH B 21 321 42 HOH HOH . 
M 5 HOH B 22 322 22 HOH HOH . 
M 5 HOH B 23 323 140 HOH HOH . 
M 5 HOH B 24 324 30 HOH HOH . 
M 5 HOH B 25 325 40 HOH HOH . 
M 5 HOH B 26 326 50 HOH HOH . 
M 5 HOH B 27 327 67 HOH HOH . 
M 5 HOH B 28 328 69 HOH HOH . 
M 5 HOH B 29 329 78 HOH HOH . 
M 5 HOH B 30 330 58 HOH HOH . 
M 5 HOH B 31 331 74 HOH HOH . 
M 5 HOH B 32 332 117 HOH HOH . 
M 5 HOH B 33 333 101 HOH HOH . 
M 5 HOH B 34 334 73 HOH HOH . 
M 5 HOH B 35 335 160 HOH HOH . 
M 5 HOH B 36 336 26 HOH HOH . 
M 5 HOH B 37 337 134 HOH HOH . 
M 5 HOH B 38 338 91 HOH HOH . 
M 5 HOH B 39 339 145 HOH HOH . 
M 5 HOH B 40 340 65 HOH HOH . 
M 5 HOH B 41 341 149 HOH HOH . 
M 5 HOH B 42 342 100 HOH HOH . 
M 5 HOH B 43 343 57 HOH HOH . 
M 5 HOH B 44 344 122 HOH HOH . 
M 5 HOH B 45 345 13 HOH HOH . 
M 5 HOH B 46 346 76 HOH HOH . 
M 5 HOH B 47 347 85 HOH HOH . 
M 5 HOH B 48 348 47 HOH HOH . 
M 5 HOH B 49 349 23 HOH HOH . 
M 5 HOH B 50 350 33 HOH HOH . 
M 5 HOH B 51 351 125 HOH HOH . 
M 5 HOH B 52 352 111 HOH HOH . 
M 5 HOH B 53 353 150 HOH HOH . 
M 5 HOH B 54 354 9 HOH HOH . 
M 5 HOH B 55 355 118 HOH HOH . 
M 5 HOH B 56 356 17 HOH HOH . 
M 5 HOH B 57 357 19 HOH HOH . 
M 5 HOH B 58 358 136 HOH HOH . 
M 5 HOH B 59 359 1 HOH HOH . 
M 5 HOH B 60 360 143 HOH HOH . 
M 5 HOH B 61 361 68 HOH HOH . 
M 5 HOH B 62 362 148 HOH HOH . 
M 5 HOH B 63 363 106 HOH HOH . 
M 5 HOH B 64 364 121 HOH HOH . 
M 5 HOH B 65 365 102 HOH HOH . 
M 5 HOH B 66 366 92 HOH HOH . 
M 5 HOH B 67 367 144 HOH HOH . 
M 5 HOH B 68 368 27 HOH HOH . 
M 5 HOH B 69 369 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -12.982 1.265 9.215 1 36.85 ? C1 GOL 202 B 1 
HETATM 2 O O1 GOL . . . H 3 -13.539 0.508 8.131 1 36.94 ? O1 GOL 202 B 1 
HETATM 3 C C2 GOL . . . H 3 -12.255 2.473 8.633 1 36.84 ? C2 GOL 202 B 1 
HETATM 4 O O2 GOL . . . H 3 -13.246 3.416 8.206 1 37.94 ? O2 GOL 202 B 1 
HETATM 5 C C3 GOL . . . H 3 -11.319 3.154 9.632 1 36.79 ? C3 GOL 202 B 1 
HETATM 6 O O3 GOL . . . H 3 -10.406 2.247 10.273 1 36.22 ? O3 GOL 202 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#