data_7EIK # _model_server_result.job_id 7RwMRDGhwJTu8HZxEt1gMg _model_server_result.datetime_utc '2024-10-19 03:49:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7eik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7EIK # _exptl.entry_id 7EIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.507 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-methyl-5-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-4-(1-methylpyrazol-4-yl)-1H-pyrrol-3-yl]ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EIK _cell.length_a 31.82 _cell.length_b 47.34 _cell.length_c 82.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H27 N7 O' _chem_comp.formula_weight 417.507 _chem_comp.id J4R _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-methyl-5-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-4-(1-methylpyrazol-4-yl)-1H-pyrrol-3-yl]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C31 N5 J4R sing 173 n n C4 C3 J4R sing 174 n n C4 N5 J4R sing 175 n n C3 N2 J4R sing 176 n n C21 C19 J4R sing 177 n n N5 C6 J4R sing 178 n n N20 C19 J4R sing 179 n y N20 C16 J4R sing 180 n y C19 C18 J4R doub 181 n y C12 C11 J4R doub 182 n y C12 C7 J4R sing 183 n y N13 C11 J4R sing 184 n y N13 C14 J4R sing 185 n y N2 C7 J4R sing 186 n n N2 C1 J4R sing 187 n n C6 C1 J4R sing 188 n n C11 C10 J4R sing 189 n y C7 C8 J4R doub 190 n y C16 C14 J4R sing 191 n n C16 C17 J4R doub 192 n y C18 C22 J4R sing 193 n n C18 C17 J4R sing 194 n y C14 N15 J4R doub 195 n y C22 C23 J4R sing 196 n n C22 O24 J4R doub 197 n n C17 C25 J4R sing 198 n n C10 N15 J4R sing 199 n y C10 C9 J4R doub 200 n y C8 C9 J4R sing 201 n y C29 C25 J4R doub 202 n y C29 N28 J4R sing 203 n y C25 C26 J4R sing 204 n y N28 C30 J4R sing 205 n n N28 N27 J4R sing 206 n y C26 N27 J4R doub 207 n y C12 H1 J4R sing 208 n n C1 H2 J4R sing 209 n n C1 H3 J4R sing 210 n n C21 H4 J4R sing 211 n n C21 H5 J4R sing 212 n n C21 H6 J4R sing 213 n n C23 H7 J4R sing 214 n n C23 H8 J4R sing 215 n n C23 H9 J4R sing 216 n n C26 H10 J4R sing 217 n n C29 H11 J4R sing 218 n n C3 H12 J4R sing 219 n n C3 H13 J4R sing 220 n n C30 H14 J4R sing 221 n n C30 H15 J4R sing 222 n n C30 H16 J4R sing 223 n n C31 H17 J4R sing 224 n n C31 H18 J4R sing 225 n n C31 H19 J4R sing 226 n n C4 H20 J4R sing 227 n n C4 H21 J4R sing 228 n n C6 H22 J4R sing 229 n n C6 H23 J4R sing 230 n n C8 H24 J4R sing 231 n n C9 H25 J4R sing 232 n n N13 H26 J4R sing 233 n n N20 H28 J4R sing 234 n n # _atom_sites.entry_id 7EIK _atom_sites.fract_transf_matrix[1][1] 0.031427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J4R A 1 201 201 J4R EJQ . C 3 HOH A 1 301 80 HOH HOH . C 3 HOH A 2 302 17 HOH HOH . C 3 HOH A 3 303 77 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 32 HOH HOH . C 3 HOH A 6 306 51 HOH HOH . C 3 HOH A 7 307 11 HOH HOH . C 3 HOH A 8 308 57 HOH HOH . C 3 HOH A 9 309 103 HOH HOH . C 3 HOH A 10 310 58 HOH HOH . C 3 HOH A 11 311 28 HOH HOH . C 3 HOH A 12 312 90 HOH HOH . C 3 HOH A 13 313 15 HOH HOH . C 3 HOH A 14 314 31 HOH HOH . C 3 HOH A 15 315 79 HOH HOH . C 3 HOH A 16 316 78 HOH HOH . C 3 HOH A 17 317 42 HOH HOH . C 3 HOH A 18 318 64 HOH HOH . C 3 HOH A 19 319 89 HOH HOH . C 3 HOH A 20 320 49 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 71 HOH HOH . C 3 HOH A 23 323 20 HOH HOH . C 3 HOH A 24 324 68 HOH HOH . C 3 HOH A 25 325 5 HOH HOH . C 3 HOH A 26 326 34 HOH HOH . C 3 HOH A 27 327 75 HOH HOH . C 3 HOH A 28 328 53 HOH HOH . C 3 HOH A 29 329 67 HOH HOH . C 3 HOH A 30 330 33 HOH HOH . C 3 HOH A 31 331 56 HOH HOH . C 3 HOH A 32 332 83 HOH HOH . C 3 HOH A 33 333 99 HOH HOH . C 3 HOH A 34 334 100 HOH HOH . C 3 HOH A 35 335 24 HOH HOH . C 3 HOH A 36 336 50 HOH HOH . C 3 HOH A 37 337 1 HOH HOH . C 3 HOH A 38 338 23 HOH HOH . C 3 HOH A 39 339 7 HOH HOH . C 3 HOH A 40 340 37 HOH HOH . C 3 HOH A 41 341 54 HOH HOH . C 3 HOH A 42 342 38 HOH HOH . C 3 HOH A 43 343 22 HOH HOH . C 3 HOH A 44 344 9 HOH HOH . C 3 HOH A 45 345 61 HOH HOH . C 3 HOH A 46 346 27 HOH HOH . C 3 HOH A 47 347 40 HOH HOH . C 3 HOH A 48 348 13 HOH HOH . C 3 HOH A 49 349 6 HOH HOH . C 3 HOH A 50 350 3 HOH HOH . C 3 HOH A 51 351 18 HOH HOH . C 3 HOH A 52 352 92 HOH HOH . C 3 HOH A 53 353 8 HOH HOH . C 3 HOH A 54 354 19 HOH HOH . C 3 HOH A 55 355 48 HOH HOH . C 3 HOH A 56 356 45 HOH HOH . C 3 HOH A 57 357 106 HOH HOH . C 3 HOH A 58 358 65 HOH HOH . C 3 HOH A 59 359 25 HOH HOH . C 3 HOH A 60 360 101 HOH HOH . C 3 HOH A 61 361 29 HOH HOH . C 3 HOH A 62 362 59 HOH HOH . C 3 HOH A 63 363 35 HOH HOH . C 3 HOH A 64 364 12 HOH HOH . C 3 HOH A 65 365 63 HOH HOH . C 3 HOH A 66 366 10 HOH HOH . C 3 HOH A 67 367 2 HOH HOH . C 3 HOH A 68 368 52 HOH HOH . C 3 HOH A 69 369 73 HOH HOH . C 3 HOH A 70 370 36 HOH HOH . C 3 HOH A 71 371 44 HOH HOH . C 3 HOH A 72 372 14 HOH HOH . C 3 HOH A 73 373 62 HOH HOH . C 3 HOH A 74 374 76 HOH HOH . C 3 HOH A 75 375 60 HOH HOH . C 3 HOH A 76 376 82 HOH HOH . C 3 HOH A 77 377 84 HOH HOH . C 3 HOH A 78 378 16 HOH HOH . C 3 HOH A 79 379 94 HOH HOH . C 3 HOH A 80 380 30 HOH HOH . C 3 HOH A 81 381 41 HOH HOH . C 3 HOH A 82 382 26 HOH HOH . C 3 HOH A 83 383 43 HOH HOH . C 3 HOH A 84 384 81 HOH HOH . C 3 HOH A 85 385 46 HOH HOH . C 3 HOH A 86 386 55 HOH HOH . C 3 HOH A 87 387 91 HOH HOH . C 3 HOH A 88 388 97 HOH HOH . C 3 HOH A 89 389 70 HOH HOH . C 3 HOH A 90 390 85 HOH HOH . C 3 HOH A 91 391 87 HOH HOH . C 3 HOH A 92 392 95 HOH HOH . C 3 HOH A 93 393 74 HOH HOH . C 3 HOH A 94 394 105 HOH HOH . C 3 HOH A 95 395 47 HOH HOH . C 3 HOH A 96 396 93 HOH HOH . C 3 HOH A 97 397 86 HOH HOH . C 3 HOH A 98 398 69 HOH HOH . C 3 HOH A 99 399 96 HOH HOH . C 3 HOH A 100 400 98 HOH HOH . C 3 HOH A 101 401 66 HOH HOH . C 3 HOH A 102 402 102 HOH HOH . C 3 HOH A 103 403 72 HOH HOH . C 3 HOH A 104 404 88 HOH HOH . C 3 HOH A 105 405 39 HOH HOH . C 3 HOH A 106 406 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 J4R . . . B 2 6.224 7.892 -0.587 1 16.03 ? C10 J4R 201 A 1 HETATM 2 C C12 J4R . . . B 2 4.524 7.112 -2.224 1 16.57 ? C12 J4R 201 A 1 HETATM 3 C C14 J4R . . . B 2 7.889 6.8 -1.312 1 13.7 ? C14 J4R 201 A 1 HETATM 4 C C1 J4R . . . B 2 1.163 7.984 -1.116 1 20.66 ? C1 J4R 201 A 1 HETATM 5 C C11 J4R . . . B 2 5.832 7.074 -1.766 1 15.59 ? C11 J4R 201 A 1 HETATM 6 C C16 J4R . . . B 2 9.265 6.246 -1.469 1 16.1 ? C16 J4R 201 A 1 HETATM 7 C C17 J4R . . . B 2 10.498 6.708 -0.807 1 17.38 ? C17 J4R 201 A 1 HETATM 8 C C18 J4R . . . B 2 11.545 5.81 -1.329 1 16.22 ? C18 J4R 201 A 1 HETATM 9 C C19 J4R . . . B 2 10.831 4.898 -2.283 1 16.45 ? C19 J4R 201 A 1 HETATM 10 C C21 J4R . . . B 2 11.458 3.792 -3.092 1 15.5 ? C21 J4R 201 A 1 HETATM 11 C C22 J4R . . . B 2 13.007 5.791 -1.026 1 18.38 ? C22 J4R 201 A 1 HETATM 12 C C23 J4R . . . B 2 13.715 7.11 -0.939 1 14.76 ? C23 J4R 201 A 1 HETATM 13 C C25 J4R . . . B 2 10.652 7.809 0.191 1 16.45 ? C25 J4R 201 A 1 HETATM 14 C C26 J4R . . . B 2 11.22 7.603 1.434 1 16.54 ? C26 J4R 201 A 1 HETATM 15 C C29 J4R . . . B 2 10.236 9.103 -0.046 1 15.79 ? C29 J4R 201 A 1 HETATM 16 C C3 J4R . . . B 2 2.023 7.895 -3.492 1 25.88 ? C3 J4R 201 A 1 HETATM 17 C C30 J4R . . . B 2 10.436 11.103 1.586 1 18.72 ? C30 J4R 201 A 1 HETATM 18 C C31 J4R . . . B 2 -1.311 7.683 -3.92 1 24.84 ? C31 J4R 201 A 1 HETATM 19 C C4 J4R . . . B 2 0.925 6.85 -3.661 1 25.6 ? C4 J4R 201 A 1 HETATM 20 C C6 J4R . . . B 2 -0.08 8.281 -1.949 1 25.28 ? C6 J4R 201 A 1 HETATM 21 C C7 J4R . . . B 2 3.592 7.919 -1.582 1 18.83 ? C7 J4R 201 A 1 HETATM 22 C C8 J4R . . . B 2 3.954 8.686 -0.475 1 17.13 ? C8 J4R 201 A 1 HETATM 23 C C9 J4R . . . B 2 5.257 8.68 0.023 1 18.91 ? C9 J4R 201 A 1 HETATM 24 N N13 J4R . . . B 2 6.93 6.412 -2.17 1 17.17 ? N13 J4R 201 A 1 HETATM 25 N N15 J4R . . . B 2 7.531 7.669 -0.359 1 13.15 ? N15 J4R 201 A 1 HETATM 26 N N2 J4R . . . B 2 2.275 7.937 -2.057 1 22.42 ? N2 J4R 201 A 1 HETATM 27 N N20 J4R . . . B 2 9.507 5.218 -2.306 1 14.27 ? N20 J4R 201 A 1 HETATM 28 N N27 J4R . . . B 2 11.172 8.823 2.021 1 17.89 ? N27 J4R 201 A 1 HETATM 29 N N28 J4R . . . B 2 10.572 9.706 1.101 1 15.85 ? N28 J4R 201 A 1 HETATM 30 N N5 J4R . . . B 2 -0.312 7.221 -2.946 1 26.24 ? N5 J4R 201 A 1 HETATM 31 O O24 J4R . . . B 2 13.588 4.73 -0.873 1 17.74 ? O24 J4R 201 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #