data_7EIL # _model_server_result.job_id Ykym-_7cSMkTZ4UB1FaAkA _model_server_result.datetime_utc '2024-10-19 03:54:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7eil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7EIL # _exptl.entry_id 7EIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 470.566 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[4-[4-ethanoyl-5-methyl-2-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-pyrrol-3-yl]phenyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EIL _cell.length_a 32.26 _cell.length_b 47.29 _cell.length_c 79.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H30 N6 O2' _chem_comp.formula_weight 470.566 _chem_comp.id 909 _chem_comp.mon_nstd_flag . _chem_comp.name N-[4-[4-ethanoyl-5-methyl-2-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-pyrrol-3-yl]phenyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C11 909 sing 1 n n C12 N7 909 sing 2 n n C11 N10 909 sing 3 n n C22 C20 909 sing 4 n n N10 C13 909 sing 5 n n N10 C9 909 sing 6 n n N7 C5 909 sing 7 n n N7 C8 909 sing 8 n n C4 C5 909 doub 9 n y C4 C3 909 sing 10 n y N14 C3 909 sing 11 n y N14 C15 909 sing 12 n y N21 C20 909 sing 13 n y N21 C17 909 sing 14 n y C20 C19 909 doub 15 n y C5 C6 909 sing 16 n y C3 C2 909 doub 17 n y C8 C9 909 sing 18 n n C17 C15 909 sing 19 n n C17 C18 909 doub 20 n y C15 N16 909 doub 21 n y C19 C23 909 sing 22 n n C19 C18 909 sing 23 n y C6 C1 909 doub 24 n y O35 C23 909 doub 25 n n C2 N16 909 sing 26 n y C2 C1 909 sing 27 n y C23 C24 909 sing 28 n n C18 C25 909 sing 29 n n C26 C25 909 doub 30 n y C26 C27 909 sing 31 n y C25 C30 909 sing 32 n y C27 C28 909 doub 33 n y C30 C29 909 doub 34 n y C28 C29 909 sing 35 n y C28 N31 909 sing 36 n n N31 C32 909 sing 37 n n C32 O33 909 doub 38 n n C32 C34 909 sing 39 n n C1 H1 909 sing 40 n n C11 H2 909 sing 41 n n C11 H3 909 sing 42 n n C12 H4 909 sing 43 n n C12 H5 909 sing 44 n n C13 H6 909 sing 45 n n C13 H7 909 sing 46 n n C13 H8 909 sing 47 n n C22 H9 909 sing 48 n n C22 H10 909 sing 49 n n C22 H11 909 sing 50 n n C24 H12 909 sing 51 n n C24 H13 909 sing 52 n n C24 H14 909 sing 53 n n C26 H15 909 sing 54 n n C27 H16 909 sing 55 n n C29 H17 909 sing 56 n n C30 H18 909 sing 57 n n C34 H19 909 sing 58 n n C34 H20 909 sing 59 n n C34 H21 909 sing 60 n n C4 H22 909 sing 61 n n C6 H23 909 sing 62 n n C8 H24 909 sing 63 n n C8 H25 909 sing 64 n n C9 H26 909 sing 65 n n C9 H27 909 sing 66 n n N14 H29 909 sing 67 n n N21 H31 909 sing 68 n n N31 H32 909 sing 69 n n # _atom_sites.entry_id 7EIL _atom_sites.fract_transf_matrix[1][1] 0.030998 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 909 A 1 201 201 909 909 . C 3 HOH A 1 301 7 HOH HOH . C 3 HOH A 2 302 14 HOH HOH . C 3 HOH A 3 303 1 HOH HOH . C 3 HOH A 4 304 2 HOH HOH . C 3 HOH A 5 305 70 HOH HOH . C 3 HOH A 6 306 47 HOH HOH . C 3 HOH A 7 307 74 HOH HOH . C 3 HOH A 8 308 90 HOH HOH . C 3 HOH A 9 309 20 HOH HOH . C 3 HOH A 10 310 88 HOH HOH . C 3 HOH A 11 311 71 HOH HOH . C 3 HOH A 12 312 37 HOH HOH . C 3 HOH A 13 313 12 HOH HOH . C 3 HOH A 14 314 27 HOH HOH . C 3 HOH A 15 315 52 HOH HOH . C 3 HOH A 16 316 41 HOH HOH . C 3 HOH A 17 317 26 HOH HOH . C 3 HOH A 18 318 34 HOH HOH . C 3 HOH A 19 319 66 HOH HOH . C 3 HOH A 20 320 30 HOH HOH . C 3 HOH A 21 321 77 HOH HOH . C 3 HOH A 22 322 9 HOH HOH . C 3 HOH A 23 323 36 HOH HOH . C 3 HOH A 24 324 15 HOH HOH . C 3 HOH A 25 325 16 HOH HOH . C 3 HOH A 26 326 43 HOH HOH . C 3 HOH A 27 327 23 HOH HOH . C 3 HOH A 28 328 60 HOH HOH . C 3 HOH A 29 329 5 HOH HOH . C 3 HOH A 30 330 82 HOH HOH . C 3 HOH A 31 331 67 HOH HOH . C 3 HOH A 32 332 53 HOH HOH . C 3 HOH A 33 333 45 HOH HOH . C 3 HOH A 34 334 10 HOH HOH . C 3 HOH A 35 335 49 HOH HOH . C 3 HOH A 36 336 8 HOH HOH . C 3 HOH A 37 337 40 HOH HOH . C 3 HOH A 38 338 51 HOH HOH . C 3 HOH A 39 339 11 HOH HOH . C 3 HOH A 40 340 24 HOH HOH . C 3 HOH A 41 341 17 HOH HOH . C 3 HOH A 42 342 59 HOH HOH . C 3 HOH A 43 343 6 HOH HOH . C 3 HOH A 44 344 83 HOH HOH . C 3 HOH A 45 345 4 HOH HOH . C 3 HOH A 46 346 28 HOH HOH . C 3 HOH A 47 347 18 HOH HOH . C 3 HOH A 48 348 22 HOH HOH . C 3 HOH A 49 349 55 HOH HOH . C 3 HOH A 50 350 44 HOH HOH . C 3 HOH A 51 351 78 HOH HOH . C 3 HOH A 52 352 54 HOH HOH . C 3 HOH A 53 353 72 HOH HOH . C 3 HOH A 54 354 61 HOH HOH . C 3 HOH A 55 355 39 HOH HOH . C 3 HOH A 56 356 31 HOH HOH . C 3 HOH A 57 357 42 HOH HOH . C 3 HOH A 58 358 50 HOH HOH . C 3 HOH A 59 359 35 HOH HOH . C 3 HOH A 60 360 3 HOH HOH . C 3 HOH A 61 361 63 HOH HOH . C 3 HOH A 62 362 58 HOH HOH . C 3 HOH A 63 363 84 HOH HOH . C 3 HOH A 64 364 29 HOH HOH . C 3 HOH A 65 365 33 HOH HOH . C 3 HOH A 66 366 87 HOH HOH . C 3 HOH A 67 367 92 HOH HOH . C 3 HOH A 68 368 48 HOH HOH . C 3 HOH A 69 369 21 HOH HOH . C 3 HOH A 70 370 19 HOH HOH . C 3 HOH A 71 371 13 HOH HOH . C 3 HOH A 72 372 56 HOH HOH . C 3 HOH A 73 373 32 HOH HOH . C 3 HOH A 74 374 25 HOH HOH . C 3 HOH A 75 375 57 HOH HOH . C 3 HOH A 76 376 69 HOH HOH . C 3 HOH A 77 377 46 HOH HOH . C 3 HOH A 78 378 38 HOH HOH . C 3 HOH A 79 379 79 HOH HOH . C 3 HOH A 80 380 80 HOH HOH . C 3 HOH A 81 381 81 HOH HOH . C 3 HOH A 82 382 85 HOH HOH . C 3 HOH A 83 383 75 HOH HOH . C 3 HOH A 84 384 64 HOH HOH . C 3 HOH A 85 385 62 HOH HOH . C 3 HOH A 86 386 89 HOH HOH . C 3 HOH A 87 387 91 HOH HOH . C 3 HOH A 88 388 68 HOH HOH . C 3 HOH A 89 389 76 HOH HOH . C 3 HOH A 90 390 65 HOH HOH . C 3 HOH A 91 391 86 HOH HOH . C 3 HOH A 92 392 93 HOH HOH . C 3 HOH A 93 393 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 909 . . . B 2 4.799 9.021 -0.059 1 48.4 ? C1 909 201 A 1 HETATM 2 C C11 909 . . . B 2 1.113 5.928 -3.143 1 69.82 ? C11 909 201 A 1 HETATM 3 C C12 909 . . . B 2 1.774 7.268 -3.45 1 66.07 ? C12 909 201 A 1 HETATM 4 C C13 909 . . . B 2 -0.689 4.801 -2.049 1 68.5 ? C13 909 201 A 1 HETATM 5 C C15 909 . . . B 2 7.565 7.078 -0.858 1 26.78 ? C15 909 201 A 1 HETATM 6 C C17 909 . . . B 2 8.961 6.586 -0.886 1 17.8 ? C17 909 201 A 1 HETATM 7 C C18 909 . . . B 2 10.118 7.154 -0.15 1 14.43 ? C18 909 201 A 1 HETATM 8 C C19 909 . . . B 2 11.182 6.247 -0.661 1 14.28 ? C19 909 201 A 1 HETATM 9 C C2 909 . . . B 2 5.832 8.196 -0.454 1 40.3 ? C2 909 201 A 1 HETATM 10 C C20 909 . . . B 2 10.544 5.289 -1.628 1 16.24 ? C20 909 201 A 1 HETATM 11 C C22 909 . . . B 2 11.198 4.184 -2.409 1 13.63 ? C22 909 201 A 1 HETATM 12 C C23 909 . . . B 2 12.647 6.249 -0.328 1 18.1 ? C23 909 201 A 1 HETATM 13 C C24 909 . . . B 2 13.261 7.47 0.296 1 20.78 ? C24 909 201 A 1 HETATM 14 C C25 909 . . . B 2 10.186 8.279 0.836 1 19.72 ? C25 909 201 A 1 HETATM 15 C C26 909 . . . B 2 9.905 9.587 0.452 1 16.4 ? C26 909 201 A 1 HETATM 16 C C27 909 . . . B 2 9.982 10.615 1.386 1 18.97 ? C27 909 201 A 1 HETATM 17 C C28 909 . . . B 2 10.333 10.353 2.705 1 21.54 ? C28 909 201 A 1 HETATM 18 C C29 909 . . . B 2 10.631 9.048 3.083 1 22.65 ? C29 909 201 A 1 HETATM 19 C C3 909 . . . B 2 5.54 7.185 -1.497 1 35.05 ? C3 909 201 A 1 HETATM 20 C C30 909 . . . B 2 10.549 8.015 2.155 1 24.77 ? C30 909 201 A 1 HETATM 21 C C32 909 . . . B 2 9.959 11.409 4.832 1 31.9 ? C32 909 201 A 1 HETATM 22 C C34 909 . . . B 2 10.175 12.718 5.543 1 22.13 ? C34 909 201 A 1 HETATM 23 C C4 909 . . . B 2 4.261 7.088 -2.025 1 39.92 ? C4 909 201 A 1 HETATM 24 C C5 909 . . . B 2 3.261 7.946 -1.585 1 49.89 ? C5 909 201 A 1 HETATM 25 C C6 909 . . . B 2 3.523 8.898 -0.603 1 52.47 ? C6 909 201 A 1 HETATM 26 C C8 909 . . . B 2 0.806 8.184 -1.35 1 67.18 ? C8 909 201 A 1 HETATM 27 C C9 909 . . . B 2 0.167 6.824 -1.091 1 70.81 ? C9 909 201 A 1 HETATM 28 N N10 909 . . . B 2 -0.114 6.12 -2.354 1 72.39 ? N10 909 201 A 1 HETATM 29 N N14 909 . . . B 2 6.688 6.527 -1.713 1 21.9 ? N14 909 201 A 1 HETATM 30 N N16 909 . . . B 2 7.129 8.087 -0.106 1 37.79 ? N16 909 201 A 1 HETATM 31 N N21 909 . . . B 2 9.231 5.571 -1.708 1 16.58 ? N21 909 201 A 1 HETATM 32 N N31 909 . . . B 2 10.41 11.394 3.576 1 24.55 ? N31 909 201 A 1 HETATM 33 N N7 909 . . . B 2 1.976 7.821 -2.125 1 61.79 ? N7 909 201 A 1 HETATM 34 O O33 909 . . . B 2 9.419 10.459 5.383 1 38.23 ? O33 909 201 A 1 HETATM 35 O O35 909 . . . B 2 13.343 5.287 -0.6 1 18.58 ? O35 909 201 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #