data_7EJ1
#
_model_server_result.job_id            s_LTtULtwU9kTWfirIOEcQ 
_model_server_result.datetime_utc      '2024-11-15 02:59:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ej1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":401}' 
#
_entry.id    7EJ1 
#
_exptl.entry_id    7EJ1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EJ1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EJ1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 235 n n 
PA O2A NAP sing 236 n n 
PA O5B NAP sing 237 n n 
PA O3 NAP sing 238 n n 
O2A HOA2 NAP sing 239 n n 
O5B C5B NAP sing 240 n n 
C5B C4B NAP sing 241 n n 
C5B H51A NAP sing 242 n n 
C5B H52A NAP sing 243 n n 
C4B O4B NAP sing 244 n n 
C4B C3B NAP sing 245 n n 
C4B H4B NAP sing 246 n n 
O4B C1B NAP sing 247 n n 
C3B O3B NAP sing 248 n n 
C3B C2B NAP sing 249 n n 
C3B H3B NAP sing 250 n n 
O3B HO3A NAP sing 251 n n 
C2B O2B NAP sing 252 n n 
C2B C1B NAP sing 253 n n 
C2B H2B NAP sing 254 n n 
O2B P2B NAP sing 255 n n 
C1B N9A NAP sing 256 n n 
C1B H1B NAP sing 257 n n 
N9A C8A NAP sing 258 n y 
N9A C4A NAP sing 259 n y 
C8A N7A NAP doub 260 n y 
C8A H8A NAP sing 261 n n 
N7A C5A NAP sing 262 n y 
C5A C6A NAP sing 263 n y 
C5A C4A NAP doub 264 n y 
C6A N6A NAP sing 265 n n 
C6A N1A NAP doub 266 n y 
N6A H61A NAP sing 267 n n 
N6A H62A NAP sing 268 n n 
N1A C2A NAP sing 269 n y 
C2A N3A NAP doub 270 n y 
C2A H2A NAP sing 271 n n 
N3A C4A NAP sing 272 n y 
O3 PN NAP sing 273 n n 
PN O1N NAP doub 274 n n 
PN O2N NAP sing 275 n n 
PN O5D NAP sing 276 n n 
O5D C5D NAP sing 277 n n 
C5D C4D NAP sing 278 n n 
C5D H51N NAP sing 279 n n 
C5D H52N NAP sing 280 n n 
C4D O4D NAP sing 281 n n 
C4D C3D NAP sing 282 n n 
C4D H4D NAP sing 283 n n 
O4D C1D NAP sing 284 n n 
C3D O3D NAP sing 285 n n 
C3D C2D NAP sing 286 n n 
C3D H3D NAP sing 287 n n 
O3D HO3N NAP sing 288 n n 
C2D O2D NAP sing 289 n n 
C2D C1D NAP sing 290 n n 
C2D H2D NAP sing 291 n n 
O2D HO2N NAP sing 292 n n 
C1D N1N NAP sing 293 n n 
C1D H1D NAP sing 294 n n 
N1N C2N NAP sing 295 n y 
N1N C6N NAP doub 296 n y 
C2N C3N NAP doub 297 n y 
C2N H2N NAP sing 298 n n 
C3N C7N NAP sing 299 n n 
C3N C4N NAP sing 300 n y 
C7N O7N NAP doub 301 n n 
C7N N7N NAP sing 302 n n 
N7N H71N NAP sing 303 n n 
N7N H72N NAP sing 304 n n 
C4N C5N NAP doub 305 n y 
C4N H4N NAP sing 306 n n 
C5N C6N NAP sing 307 n y 
C5N H5N NAP sing 308 n n 
C6N H6N NAP sing 309 n n 
P2B O1X NAP doub 310 n n 
P2B O2X NAP sing 311 n n 
P2B O3X NAP sing 312 n n 
O2X HOP2 NAP sing 313 n n 
O3X HOP3 NAP sing 314 n n 
#
_atom_sites.entry_id                     7EJ1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 NAP A 1 401 401 NAP NAP . 
J 3 NAP C 1 401 401 NAP NAP . 
K 3 NAP E 1 401 401 NAP NAP . 
L 3 NAP G 1 401 401 NAP NAP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . J 3 170.955 116.542 216.148 1 58.69 ? PA NAP 401 C 1 
HETATM 2 O O1A NAP . . . J 3 170.923 115.85 214.81 1 58.69 ? O1A NAP 401 C 1 
HETATM 3 O O2A NAP . . . J 3 172.322 117.136 216.373 1 58.69 ? O2A NAP 401 C 1 
HETATM 4 O O5B NAP . . . J 3 170.654 115.445 217.342 1 58.69 ? O5B NAP 401 C 1 
HETATM 5 C C5B NAP . . . J 3 171.759 114.874 217.992 1 58.69 ? C5B NAP 401 C 1 
HETATM 6 C C4B NAP . . . J 3 171.277 113.956 219.148 1 58.69 ? C4B NAP 401 C 1 
HETATM 7 O O4B NAP . . . J 3 172.137 112.988 219.349 1 58.69 ? O4B NAP 401 C 1 
HETATM 8 C C3B NAP . . . J 3 171.211 114.748 220.46 1 58.69 ? C3B NAP 401 C 1 
HETATM 9 O O3B NAP . . . J 3 169.958 114.709 220.974 1 58.69 ? O3B NAP 401 C 1 
HETATM 10 C C2B NAP . . . J 3 172.174 113.972 221.368 1 58.69 ? C2B NAP 401 C 1 
HETATM 11 O O2B NAP . . . J 3 171.393 113.267 222.44 1 58.69 ? O2B NAP 401 C 1 
HETATM 12 C C1B NAP . . . J 3 172.829 113.157 220.578 1 58.69 ? C1B NAP 401 C 1 
HETATM 13 N N9A NAP . . . J 3 174.161 113.667 220.353 1 58.69 ? N9A NAP 401 C 1 
HETATM 14 C C8A NAP . . . J 3 174.551 114.924 220.132 1 58.69 ? C8A NAP 401 C 1 
HETATM 15 N N7A NAP . . . J 3 175.878 114.934 219.983 1 58.69 ? N7A NAP 401 C 1 
HETATM 16 C C5A NAP . . . J 3 176.311 113.675 220.117 1 58.69 ? C5A NAP 401 C 1 
HETATM 17 C C6A NAP . . . J 3 177.571 113.125 220.059 1 58.69 ? C6A NAP 401 C 1 
HETATM 18 N N6A NAP . . . J 3 178.895 113.662 219.835 1 58.69 ? N6A NAP 401 C 1 
HETATM 19 N N1A NAP . . . J 3 177.735 111.825 220.229 1 58.69 ? N1A NAP 401 C 1 
HETATM 20 C C2A NAP . . . J 3 176.664 111.03 220.462 1 58.69 ? C2A NAP 401 C 1 
HETATM 21 N N3A NAP . . . J 3 175.425 111.569 220.52 1 58.69 ? N3A NAP 401 C 1 
HETATM 22 C C4A NAP . . . J 3 175.254 112.892 220.347 1 58.69 ? C4A NAP 401 C 1 
HETATM 23 O O3 NAP . . . J 3 169.836 117.759 216.163 1 58.69 ? O3 NAP 401 C 1 
HETATM 24 P PN NAP . . . J 3 168.329 117.673 216.831 1 58.69 ? PN NAP 401 C 1 
HETATM 25 O O1N NAP . . . J 3 168.379 116.996 218.176 1 58.69 ? O1N NAP 401 C 1 
HETATM 26 O O2N NAP . . . J 3 167.406 116.918 215.91 1 58.69 ? O2N NAP 401 C 1 
HETATM 27 O O5D NAP . . . J 3 167.762 119.203 217.051 1 58.69 ? O5D NAP 401 C 1 
HETATM 28 C C5D NAP . . . J 3 168.392 120.252 216.369 1 58.69 ? C5D NAP 401 C 1 
HETATM 29 C C4D NAP . . . J 3 167.382 121.419 216.212 1 58.69 ? C4D NAP 401 C 1 
HETATM 30 O O4D NAP . . . J 3 166.6 121.205 215.189 1 58.69 ? O4D NAP 401 C 1 
HETATM 31 C C3D NAP . . . J 3 166.427 121.444 217.415 1 58.69 ? C3D NAP 401 C 1 
HETATM 32 O O3D NAP . . . J 3 166.967 122.127 218.447 1 58.69 ? O3D NAP 401 C 1 
HETATM 33 C C2D NAP . . . J 3 165.235 122.202 216.824 1 58.69 ? C2D NAP 401 C 1 
HETATM 34 O O2D NAP . . . J 3 165.296 123.642 217.211 1 58.69 ? O2D NAP 401 C 1 
HETATM 35 C C1D NAP . . . J 3 165.471 122.044 215.327 1 58.69 ? C1D NAP 401 C 1 
HETATM 36 N N1N NAP . . . J 3 164.313 121.424 214.744 1 58.69 ? N1N NAP 401 C 1 
HETATM 37 C C2N NAP . . . J 3 163.526 122.136 213.908 1 58.69 ? C2N NAP 401 C 1 
HETATM 38 C C3N NAP . . . J 3 162.407 121.538 213.354 1 58.69 ? C3N NAP 401 C 1 
HETATM 39 C C7N NAP . . . J 3 161.512 122.332 212.405 1 58.69 ? C7N NAP 401 C 1 
HETATM 40 O O7N NAP . . . J 3 160.393 121.993 212.231 1 58.69 ? O7N NAP 401 C 1 
HETATM 41 N N7N NAP . . . J 3 162.036 123.496 211.715 1 58.69 ? N7N NAP 401 C 1 
HETATM 42 C C4N NAP . . . J 3 162.105 120.25 213.65 1 58.69 ? C4N NAP 401 C 1 
HETATM 43 C C5N NAP . . . J 3 162.894 119.538 214.49 1 58.69 ? C5N NAP 401 C 1 
HETATM 44 C C6N NAP . . . J 3 164.012 120.139 215.043 1 58.69 ? C6N NAP 401 C 1 
HETATM 45 P P2B NAP . . . J 3 171.356 111.624 222.608 1 58.69 ? P2B NAP 401 C 1 
HETATM 46 O O1X NAP . . . J 3 170.772 110.977 221.375 1 58.69 ? O1X NAP 401 C 1 
HETATM 47 O O2X NAP . . . J 3 172.741 111.082 222.874 1 58.69 ? O2X NAP 401 C 1 
HETATM 48 O O3X NAP . . . J 3 170.48 111.286 223.789 1 58.69 ? O3X NAP 401 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    54 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#