data_7EJV
#
_model_server_result.job_id            T85GLas9ir3ssHNlBtlCdQ 
_model_server_result.datetime_utc      '2024-11-14 19:07:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ejv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    7EJV 
#
_exptl.entry_id    7EJV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.598 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[6-[[4-[2-(dimethylamino)-1,3-benzothiazol-6-yl]-5-fluoranyl-pyrimidin-2-yl]amino]pyridin-3-yl]-(4-ethylpiperazin-1-yl)methanone' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EJV 
_cell.length_a            60.86 
_cell.length_b            129.387 
_cell.length_c            291.733 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EJV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 231 A THR 308 1_555 A N PTR 232 A PTR 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C PTR 232 A PTR 309 1_555 A N ILE 233 A ILE 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B C THR 229 B THR 308 1_555 B N PTR 230 B PTR 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale4 B C PTR 230 B PTR 309 1_555 B N ILE 231 B ILE 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C25 H27 F N8 O S' 
_chem_comp.formula_weight    506.598 
_chem_comp.id                YK2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[6-[[4-[2-(dimethylamino)-1,3-benzothiazol-6-yl]-5-fluoranyl-pyrimidin-2-yl]amino]pyridin-3-yl]-(4-ethylpiperazin-1-yl)methanone' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C08 N06 YK2 sing 405 n n 
N06 C05 YK2 sing 406 n n 
N06 C24 YK2 sing 407 n n 
N08 C24 YK2 doub 408 n y 
N08 C19 YK2 sing 409 n y 
C24 S01 YK2 sing 410 n y 
C19 C22 YK2 doub 411 n y 
C19 C18 YK2 sing 412 n y 
C22 C20 YK2 sing 413 n y 
S01 C18 YK2 sing 414 n y 
C18 C17 YK2 doub 415 n y 
C20 C13 YK2 doub 416 n y 
C17 C13 YK2 sing 417 n y 
C13 C12 YK2 sing 418 n n 
F01 C14 YK2 sing 419 n n 
C12 C14 YK2 sing 420 n y 
C12 N05 YK2 doub 421 n y 
C14 C16 YK2 doub 422 n y 
N05 C10 YK2 sing 423 n y 
C16 N07 YK2 sing 424 n y 
C06 C02 YK2 doub 425 n y 
C06 C07 YK2 sing 426 n y 
C10 N07 YK2 doub 427 n y 
C10 N03 YK2 sing 428 n n 
C02 C01 YK2 sing 429 n y 
C07 N03 YK2 sing 430 n n 
C07 N02 YK2 doub 431 n y 
O01 C03 YK2 doub 432 n n 
C01 C03 YK2 sing 433 n n 
C01 C04 YK2 doub 434 n y 
C03 N01 YK2 sing 435 n n 
C09 C11 YK2 sing 436 n n 
N01 C23 YK2 sing 437 n n 
N01 C25 YK2 sing 438 n n 
C23 C15 YK2 sing 439 n n 
N04 C15 YK2 sing 440 n n 
N04 C11 YK2 sing 441 n n 
N04 C21 YK2 sing 442 n n 
C25 C21 YK2 sing 443 n n 
N02 C04 YK2 sing 444 n y 
C02 H1 YK2 sing 445 n n 
C04 H2 YK2 sing 446 n n 
C05 H3 YK2 sing 447 n n 
C05 H4 YK2 sing 448 n n 
C05 H5 YK2 sing 449 n n 
C06 H6 YK2 sing 450 n n 
C08 H7 YK2 sing 451 n n 
C08 H8 YK2 sing 452 n n 
C08 H9 YK2 sing 453 n n 
C09 H10 YK2 sing 454 n n 
C09 H11 YK2 sing 455 n n 
C09 H12 YK2 sing 456 n n 
C11 H14 YK2 sing 457 n n 
C11 H15 YK2 sing 458 n n 
C15 H18 YK2 sing 459 n n 
C15 H19 YK2 sing 460 n n 
C16 H20 YK2 sing 461 n n 
C17 H22 YK2 sing 462 n n 
C20 H23 YK2 sing 463 n n 
C21 H24 YK2 sing 464 n n 
C21 H25 YK2 sing 465 n n 
C22 H26 YK2 sing 466 n n 
C23 H27 YK2 sing 467 n n 
C23 H28 YK2 sing 468 n n 
C25 H29 YK2 sing 469 n n 
C25 H30 YK2 sing 470 n n 
N03 H31 YK2 sing 471 n n 
#
_atom_sites.entry_id                     7EJV 
_atom_sites.fract_transf_matrix[1][1]    0.016431 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007729 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003428 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 YK2 A 1 501 2 YK2 YK2 . 
D 3 YK2 B 1 501 1 YK2 YK2 . 
E 4 HOH A 1 601 41 HOH HOH . 
E 4 HOH A 2 602 36 HOH HOH . 
E 4 HOH A 3 603 2 HOH HOH . 
E 4 HOH A 4 604 25 HOH HOH . 
E 4 HOH A 5 605 20 HOH HOH . 
E 4 HOH A 6 606 17 HOH HOH . 
E 4 HOH A 7 607 12 HOH HOH . 
E 4 HOH A 8 608 11 HOH HOH . 
E 4 HOH A 9 609 16 HOH HOH . 
E 4 HOH A 10 610 3 HOH HOH . 
E 4 HOH A 11 611 35 HOH HOH . 
E 4 HOH A 12 612 39 HOH HOH . 
E 4 HOH A 13 613 19 HOH HOH . 
E 4 HOH A 14 614 26 HOH HOH . 
E 4 HOH A 15 615 13 HOH HOH . 
F 4 HOH B 1 601 24 HOH HOH . 
F 4 HOH B 2 602 29 HOH HOH . 
F 4 HOH B 3 603 10 HOH HOH . 
F 4 HOH B 4 604 9 HOH HOH . 
F 4 HOH B 5 605 40 HOH HOH . 
F 4 HOH B 6 606 28 HOH HOH . 
F 4 HOH B 7 607 8 HOH HOH . 
F 4 HOH B 8 608 32 HOH HOH . 
F 4 HOH B 9 609 34 HOH HOH . 
F 4 HOH B 10 610 22 HOH HOH . 
F 4 HOH B 11 611 30 HOH HOH . 
F 4 HOH B 12 612 37 HOH HOH . 
F 4 HOH B 13 613 18 HOH HOH . 
F 4 HOH B 14 614 5 HOH HOH . 
F 4 HOH B 15 615 1 HOH HOH . 
F 4 HOH B 16 616 21 HOH HOH . 
F 4 HOH B 17 617 15 HOH HOH . 
F 4 HOH B 18 618 23 HOH HOH . 
F 4 HOH B 19 619 27 HOH HOH . 
F 4 HOH B 20 620 42 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 YK2 . . . D 3 -9.48 -0.658 62.463 1 48.28 ? C01 YK2 501 B 1 
HETATM 2 C C02 YK2 . . . D 3 -9.918 -0.045 61.33 1 39.86 ? C02 YK2 501 B 1 
HETATM 3 C C03 YK2 . . . D 3 -9.451 -2.188 62.548 1 57.01 ? C03 YK2 501 B 1 
HETATM 4 C C04 YK2 . . . D 3 -9.106 0.097 63.581 1 51.18 ? C04 YK2 501 B 1 
HETATM 5 C C05 YK2 . . . D 3 -8.551 -0.972 52.843 1 51.92 ? C05 YK2 501 B 1 
HETATM 6 C C06 YK2 . . . D 3 -9.966 1.302 61.286 1 39.21 ? C06 YK2 501 B 1 
HETATM 7 C C07 YK2 . . . D 3 -9.581 2.065 62.38 1 46.13 ? C07 YK2 501 B 1 
HETATM 8 C C08 YK2 . . . D 3 -8.936 1.007 51.251 1 63.01 ? C08 YK2 501 B 1 
HETATM 9 C C09 YK2 . . . D 3 -3.459 -4.26 62.783 1 85.07 ? C09 YK2 501 B 1 
HETATM 10 C C10 YK2 . . . D 3 -10.162 4.3 61.295 1 40.92 ? C10 YK2 501 B 1 
HETATM 11 C C11 YK2 . . . D 3 -4.734 -4.931 63.312 1 88.57 ? C11 YK2 501 B 1 
HETATM 12 C C12 YK2 . . . D 3 -9.893 4.817 58.885 1 42.01 ? C12 YK2 501 B 1 
HETATM 13 C C13 YK2 . . . D 3 -9.803 4.396 57.433 1 47.06 ? C13 YK2 501 B 1 
HETATM 14 C C14 YK2 . . . D 3 -10.227 6.295 59.261 1 50.96 ? C14 YK2 501 B 1 
HETATM 15 C C15 YK2 . . . D 3 -6.888 -5.023 63.238 1 89.45 ? C15 YK2 501 B 1 
HETATM 16 C C16 YK2 . . . D 3 -10.699 6.578 60.622 1 49.98 ? C16 YK2 501 B 1 
HETATM 17 C C17 YK2 . . . D 3 -9.425 3.088 57.235 1 45.14 ? C17 YK2 501 B 1 
HETATM 18 C C18 YK2 . . . D 3 -9.306 2.569 55.955 1 44.08 ? C18 YK2 501 B 1 
HETATM 19 C C19 YK2 . . . D 3 -9.571 3.364 54.899 1 41.61 ? C19 YK2 501 B 1 
HETATM 20 C C20 YK2 . . . D 3 -10.083 5.201 56.36 1 42.83 ? C20 YK2 501 B 1 
HETATM 21 C C21 YK2 . . . D 3 -5.93 -3.179 63.662 1 90.08 ? C21 YK2 501 B 1 
HETATM 22 C C22 YK2 . . . D 3 -9.965 4.684 55.088 1 43.32 ? C22 YK2 501 B 1 
HETATM 23 C C23 YK2 . . . D 3 -8.25 -4.399 62.899 1 75.46 ? C23 YK2 501 B 1 
HETATM 24 C C24 YK2 . . . D 3 -8.966 1.321 53.701 1 45.88 ? C24 YK2 501 B 1 
HETATM 25 C C25 YK2 . . . D 3 -6.948 -2.243 63.008 1 70.59 ? C25 YK2 501 B 1 
HETATM 26 F F01 YK2 . . . D 3 -11.031 6.967 58.379 1 49.79 ? F01 YK2 501 B 1 
HETATM 27 N N01 YK2 . . . D 3 -8.214 -2.934 62.823 1 65.61 ? N01 YK2 501 B 1 
HETATM 28 N N02 YK2 . . . D 3 -9.154 1.462 63.51 1 50.54 ? N02 YK2 501 B 1 
HETATM 29 N N03 YK2 . . . D 3 -9.612 3.52 62.386 1 41.67 ? N03 YK2 501 B 1 
HETATM 30 N N04 YK2 . . . D 3 -5.843 -4.281 62.964 1 92.22 ? N04 YK2 501 B 1 
HETATM 31 N N05 YK2 . . . D 3 -9.637 3.856 60.002 1 37.63 ? N05 YK2 501 B 1 
HETATM 32 N N06 YK2 . . . D 3 -8.779 0.445 52.585 1 54.92 ? N06 YK2 501 B 1 
HETATM 33 N N07 YK2 . . . D 3 -10.105 5.666 61.551 1 41.74 ? N07 YK2 501 B 1 
HETATM 34 N N08 YK2 . . . D 3 -9.39 2.688 53.695 1 34.54 ? N08 YK2 501 B 1 
HETATM 35 O O01 YK2 . . . D 3 -10.49 -2.757 62.395 1 52.82 ? O01 YK2 501 B 1 
HETATM 36 S S01 YK2 . . . D 3 -8.813 1.01 55.48 1 47.24 ? S01 YK2 501 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           220 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           36 
#