data_7EJX
#
_model_server_result.job_id            eBkWq7DT6mOyyTEDUQ5Xkw 
_model_server_result.datetime_utc      '2024-12-26 11:38:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ejx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    7EJX 
#
_exptl.entry_id    7EJX 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              455.634 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EJX 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EJX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 22 S CYS 22 1_555 E SG CYS 96 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 E SG CYS 159 S CYS 147 1_555 E SG CYS 229 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C30 H37 N3 O' 
_chem_comp.formula_weight    455.634 
_chem_comp.id                J5F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C8 J5F doub 250 n y 
C7 N6 J5F sing 251 n y 
C8 C9 J5F sing 252 n y 
N6 C5 J5F doub 253 n y 
C9 C10 J5F doub 254 n y 
C5 C10 J5F sing 255 n y 
C5 C4 J5F sing 256 n n 
C4 C11 J5F sing 257 n n 
C4 C3 J5F sing 258 n n 
C11 C3 J5F sing 259 n n 
C3 C2 J5F sing 260 n n 
O1 C2 J5F doub 261 n n 
C2 N12 J5F sing 262 n n 
N12 C20 J5F sing 263 n n 
N12 C13 J5F sing 264 n n 
N15 C14 J5F sing 265 n n 
C21 C20 J5F doub 266 n y 
C21 C22 J5F sing 267 n y 
C20 C34 J5F sing 268 n y 
C22 C23 J5F doub 269 n y 
C13 C14 J5F sing 270 n n 
C14 C16 J5F sing 271 n n 
C34 C33 J5F doub 272 n y 
C18 C19 J5F sing 273 n n 
C18 C16 J5F sing 274 n n 
C25 C26 J5F doub 275 n y 
C25 C24 J5F sing 276 n y 
C23 C33 J5F sing 277 n y 
C23 C24 J5F sing 278 n n 
C16 C17 J5F sing 279 n n 
C26 C27 J5F sing 280 n y 
C24 C32 J5F doub 281 n y 
C27 C31 J5F doub 282 n y 
C27 C28 J5F sing 283 n n 
C32 C31 J5F sing 284 n y 
C28 C29 J5F sing 285 n n 
C29 C30 J5F sing 286 n n 
C11 H1 J5F sing 287 n n 
C11 H2 J5F sing 288 n n 
C13 H3 J5F sing 289 n n 
C13 H4 J5F sing 290 n n 
C14 H5 J5F sing 291 n n 
C21 H6 J5F sing 292 n n 
C22 H7 J5F sing 293 n n 
C25 H8 J5F sing 294 n n 
C26 H9 J5F sing 295 n n 
C28 H10 J5F sing 296 n n 
C28 H11 J5F sing 297 n n 
C29 H12 J5F sing 298 n n 
C29 H13 J5F sing 299 n n 
C31 H14 J5F sing 300 n n 
C32 H15 J5F sing 301 n n 
C33 H16 J5F sing 302 n n 
C34 H17 J5F sing 303 n n 
C3 H18 J5F sing 304 n n 
C4 H19 J5F sing 305 n n 
C7 H20 J5F sing 306 n n 
C8 H21 J5F sing 307 n n 
C9 H22 J5F sing 308 n n 
C10 H23 J5F sing 309 n n 
N15 H24 J5F sing 310 n n 
N15 H25 J5F sing 311 n n 
C16 H27 J5F sing 312 n n 
C17 H28 J5F sing 313 n n 
C17 H29 J5F sing 314 n n 
C17 H30 J5F sing 315 n n 
C18 H31 J5F sing 316 n n 
C18 H32 J5F sing 317 n n 
C19 H33 J5F sing 318 n n 
C19 H34 J5F sing 319 n n 
C19 H35 J5F sing 320 n n 
C30 H36 J5F sing 321 n n 
C30 H37 J5F sing 322 n n 
C30 H38 J5F sing 323 n n 
#
_atom_sites.entry_id                     7EJX 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 J5F R 1 401 1 J5F PC1 . 
G 7 CLR R 1 402 414 CLR CLR . 
H 7 CLR R 1 403 415 CLR CLR . 
I 7 CLR R 1 404 416 CLR CLR . 
J 8 HOH R 1 501 2 HOH HOH . 
J 8 HOH R 2 502 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 J5F . . . F 6 144.571 144.982 155.123 1 84.58 ? C11 J5F 401 R 1 
HETATM 2 C C13 J5F . . . F 6 143.385 147.097 159.683 1 84.58 ? C13 J5F 401 R 1 
HETATM 3 C C14 J5F . . . F 6 142.125 147.963 159.941 1 84.58 ? C14 J5F 401 R 1 
HETATM 4 C C21 J5F . . . F 6 141.612 144.095 158.84 1 84.58 ? C21 J5F 401 R 1 
HETATM 5 C C22 J5F . . . F 6 141.245 142.875 159.413 1 84.58 ? C22 J5F 401 R 1 
HETATM 6 C C23 J5F . . . F 6 142.076 142.281 160.358 1 84.58 ? C23 J5F 401 R 1 
HETATM 7 C C24 J5F . . . F 6 141.686 140.948 161.006 1 84.58 ? C24 J5F 401 R 1 
HETATM 8 C C25 J5F . . . F 6 140.988 139.963 160.306 1 84.58 ? C25 J5F 401 R 1 
HETATM 9 C C26 J5F . . . F 6 140.65 138.766 160.933 1 84.58 ? C26 J5F 401 R 1 
HETATM 10 C C27 J5F . . . F 6 141.005 138.561 162.265 1 84.58 ? C27 J5F 401 R 1 
HETATM 11 C C28 J5F . . . F 6 140.649 137.254 162.995 1 84.58 ? C28 J5F 401 R 1 
HETATM 12 C C29 J5F . . . F 6 139.903 137.508 164.322 1 84.58 ? C29 J5F 401 R 1 
HETATM 13 C C31 J5F . . . F 6 141.69 139.552 162.953 1 84.58 ? C31 J5F 401 R 1 
HETATM 14 C C32 J5F . . . F 6 142.04 140.738 162.33 1 84.58 ? C32 J5F 401 R 1 
HETATM 15 C C33 J5F . . . F 6 143.266 142.9 160.744 1 84.58 ? C33 J5F 401 R 1 
HETATM 16 C C34 J5F . . . F 6 143.631 144.115 160.167 1 84.58 ? C34 J5F 401 R 1 
HETATM 17 O O1 J5F . . . F 6 144.163 147.138 156.886 1 84.58 ? O1 J5F 401 R 1 
HETATM 18 C C2 J5F . . . F 6 143.751 146.107 157.293 1 84.58 ? C2 J5F 401 R 1 
HETATM 19 C C3 J5F . . . F 6 143.691 144.877 156.358 1 84.58 ? C3 J5F 401 R 1 
HETATM 20 C C4 J5F . . . F 6 143.047 145.005 154.982 1 84.58 ? C4 J5F 401 R 1 
HETATM 21 C C5 J5F . . . F 6 142.185 143.991 154.215 1 84.58 ? C5 J5F 401 R 1 
HETATM 22 N N6 J5F . . . F 6 141.381 144.413 153.261 1 84.58 ? N6 J5F 401 R 1 
HETATM 23 C C7 J5F . . . F 6 140.62 143.575 152.578 1 84.58 ? C7 J5F 401 R 1 
HETATM 24 C C8 J5F . . . F 6 140.664 142.217 152.866 1 84.58 ? C8 J5F 401 R 1 
HETATM 25 C C9 J5F . . . F 6 141.503 141.741 153.867 1 84.58 ? C9 J5F 401 R 1 
HETATM 26 C C10 J5F . . . F 6 142.283 142.651 154.564 1 84.58 ? C10 J5F 401 R 1 
HETATM 27 N N12 J5F . . . F 6 143.297 145.981 158.699 1 84.58 ? N12 J5F 401 R 1 
HETATM 28 N N15 J5F . . . F 6 141.659 148.575 158.712 1 84.58 ? N15 J5F 401 R 1 
HETATM 29 C C16 J5F . . . F 6 140.992 147.135 160.549 1 84.58 ? C16 J5F 401 R 1 
HETATM 30 C C17 J5F . . . F 6 141.185 146.99 162.056 1 84.58 ? C17 J5F 401 R 1 
HETATM 31 C C18 J5F . . . F 6 139.652 147.821 160.288 1 84.58 ? C18 J5F 401 R 1 
HETATM 32 C C19 J5F . . . F 6 138.508 146.788 160.37 1 84.58 ? C19 J5F 401 R 1 
HETATM 33 C C20 J5F . . . F 6 142.818 144.693 159.219 1 84.58 ? C20 J5F 401 R 1 
HETATM 34 C C30 J5F . . . F 6 139.432 136.207 164.999 1 84.58 ? C30 J5F 401 R 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           34 
#