data_7EKV # _model_server_result.job_id xn0kuMwmO0u5yX1QeEfMhA _model_server_result.datetime_utc '2024-11-23 05:04:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ekv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7EKV # _exptl.entry_id 7EKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.436 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7EKV _cell.length_a 68.637 _cell.length_b 68.637 _cell.length_c 79.813 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 133 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 113 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C24 _struct_conn.ptnr2_label_comp_id J50 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id J50 _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.698 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H34 O9' _chem_comp.formula_weight 370.436 _chem_comp.id PE8 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 PE8 sing 288 n n O1 HO1 PE8 sing 289 n n C2 C3 PE8 sing 290 n n C2 H21 PE8 sing 291 n n C2 H22 PE8 sing 292 n n C3 O4 PE8 sing 293 n n C3 H31 PE8 sing 294 n n C3 H32 PE8 sing 295 n n O4 C5 PE8 sing 296 n n C5 C6 PE8 sing 297 n n C5 H51 PE8 sing 298 n n C5 H52 PE8 sing 299 n n C6 O7 PE8 sing 300 n n C6 H61 PE8 sing 301 n n C6 H62 PE8 sing 302 n n O7 C8 PE8 sing 303 n n C8 C9 PE8 sing 304 n n C8 H81 PE8 sing 305 n n C8 H82 PE8 sing 306 n n C9 O10 PE8 sing 307 n n C9 H91 PE8 sing 308 n n C9 H92 PE8 sing 309 n n O10 C11 PE8 sing 310 n n C11 C12 PE8 sing 311 n n C11 H111 PE8 sing 312 n n C11 H112 PE8 sing 313 n n C12 O13 PE8 sing 314 n n C12 H121 PE8 sing 315 n n C12 H122 PE8 sing 316 n n O13 C14 PE8 sing 317 n n C14 C15 PE8 sing 318 n n C14 H141 PE8 sing 319 n n C14 H142 PE8 sing 320 n n C15 O16 PE8 sing 321 n n C15 H151 PE8 sing 322 n n C15 H152 PE8 sing 323 n n O16 C17 PE8 sing 324 n n C17 C18 PE8 sing 325 n n C17 H171 PE8 sing 326 n n C17 H172 PE8 sing 327 n n C18 O19 PE8 sing 328 n n C18 H181 PE8 sing 329 n n C18 H182 PE8 sing 330 n n O19 C20 PE8 sing 331 n n C20 C21 PE8 sing 332 n n C20 H201 PE8 sing 333 n n C20 H202 PE8 sing 334 n n C21 O22 PE8 sing 335 n n C21 H211 PE8 sing 336 n n C21 H212 PE8 sing 337 n n O22 C23 PE8 sing 338 n n C23 C24 PE8 sing 339 n n C23 H231 PE8 sing 340 n n C23 H232 PE8 sing 341 n n C24 O25 PE8 sing 342 n n C24 H241 PE8 sing 343 n n C24 H242 PE8 sing 344 n n O25 H25 PE8 sing 345 n n # _atom_sites.entry_id 7EKV _atom_sites.fract_transf_matrix[1][1] 0.014569 _atom_sites.fract_transf_matrix[1][2] 0.008412 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J50 A 1 201 201 J50 117 . C 3 PE8 A 1 202 301 PE8 PE8 . D 4 HOH A 1 301 164 HOH HOH . D 4 HOH A 2 302 157 HOH HOH . D 4 HOH A 3 303 161 HOH HOH . D 4 HOH A 4 304 34 HOH HOH . D 4 HOH A 5 305 173 HOH HOH . D 4 HOH A 6 306 1 HOH HOH . D 4 HOH A 7 307 160 HOH HOH . D 4 HOH A 8 308 179 HOH HOH . D 4 HOH A 9 309 2 HOH HOH . D 4 HOH A 10 310 89 HOH HOH . D 4 HOH A 11 311 3 HOH HOH . D 4 HOH A 12 312 122 HOH HOH . D 4 HOH A 13 313 93 HOH HOH . D 4 HOH A 14 314 48 HOH HOH . D 4 HOH A 15 315 130 HOH HOH . D 4 HOH A 16 316 36 HOH HOH . D 4 HOH A 17 317 123 HOH HOH . D 4 HOH A 18 318 45 HOH HOH . D 4 HOH A 19 319 147 HOH HOH . D 4 HOH A 20 320 5 HOH HOH . D 4 HOH A 21 321 19 HOH HOH . D 4 HOH A 22 322 21 HOH HOH . D 4 HOH A 23 323 61 HOH HOH . D 4 HOH A 24 324 30 HOH HOH . D 4 HOH A 25 325 58 HOH HOH . D 4 HOH A 26 326 14 HOH HOH . D 4 HOH A 27 327 29 HOH HOH . D 4 HOH A 28 328 41 HOH HOH . D 4 HOH A 29 329 152 HOH HOH . D 4 HOH A 30 330 11 HOH HOH . D 4 HOH A 31 331 15 HOH HOH . D 4 HOH A 32 332 101 HOH HOH . D 4 HOH A 33 333 66 HOH HOH . D 4 HOH A 34 334 32 HOH HOH . D 4 HOH A 35 335 127 HOH HOH . D 4 HOH A 36 336 82 HOH HOH . D 4 HOH A 37 337 8 HOH HOH . D 4 HOH A 38 338 140 HOH HOH . D 4 HOH A 39 339 107 HOH HOH . D 4 HOH A 40 340 9 HOH HOH . D 4 HOH A 41 341 20 HOH HOH . D 4 HOH A 42 342 57 HOH HOH . D 4 HOH A 43 343 116 HOH HOH . D 4 HOH A 44 344 70 HOH HOH . D 4 HOH A 45 345 108 HOH HOH . D 4 HOH A 46 346 4 HOH HOH . D 4 HOH A 47 347 136 HOH HOH . D 4 HOH A 48 348 129 HOH HOH . D 4 HOH A 49 349 43 HOH HOH . D 4 HOH A 50 350 6 HOH HOH . D 4 HOH A 51 351 175 HOH HOH . D 4 HOH A 52 352 27 HOH HOH . D 4 HOH A 53 353 38 HOH HOH . D 4 HOH A 54 354 156 HOH HOH . D 4 HOH A 55 355 25 HOH HOH . D 4 HOH A 56 356 59 HOH HOH . D 4 HOH A 57 357 83 HOH HOH . D 4 HOH A 58 358 134 HOH HOH . D 4 HOH A 59 359 35 HOH HOH . D 4 HOH A 60 360 7 HOH HOH . D 4 HOH A 61 361 17 HOH HOH . D 4 HOH A 62 362 47 HOH HOH . D 4 HOH A 63 363 40 HOH HOH . D 4 HOH A 64 364 62 HOH HOH . D 4 HOH A 65 365 166 HOH HOH . D 4 HOH A 66 366 31 HOH HOH . D 4 HOH A 67 367 42 HOH HOH . D 4 HOH A 68 368 150 HOH HOH . D 4 HOH A 69 369 85 HOH HOH . D 4 HOH A 70 370 77 HOH HOH . D 4 HOH A 71 371 12 HOH HOH . D 4 HOH A 72 372 95 HOH HOH . D 4 HOH A 73 373 149 HOH HOH . D 4 HOH A 74 374 117 HOH HOH . D 4 HOH A 75 375 94 HOH HOH . D 4 HOH A 76 376 13 HOH HOH . D 4 HOH A 77 377 154 HOH HOH . D 4 HOH A 78 378 126 HOH HOH . D 4 HOH A 79 379 60 HOH HOH . D 4 HOH A 80 380 44 HOH HOH . D 4 HOH A 81 381 49 HOH HOH . D 4 HOH A 82 382 174 HOH HOH . D 4 HOH A 83 383 55 HOH HOH . D 4 HOH A 84 384 46 HOH HOH . D 4 HOH A 85 385 18 HOH HOH . D 4 HOH A 86 386 23 HOH HOH . D 4 HOH A 87 387 75 HOH HOH . D 4 HOH A 88 388 53 HOH HOH . D 4 HOH A 89 389 16 HOH HOH . D 4 HOH A 90 390 158 HOH HOH . D 4 HOH A 91 391 102 HOH HOH . D 4 HOH A 92 392 50 HOH HOH . D 4 HOH A 93 393 118 HOH HOH . D 4 HOH A 94 394 110 HOH HOH . D 4 HOH A 95 395 10 HOH HOH . D 4 HOH A 96 396 96 HOH HOH . D 4 HOH A 97 397 109 HOH HOH . D 4 HOH A 98 398 163 HOH HOH . D 4 HOH A 99 399 65 HOH HOH . D 4 HOH A 100 400 125 HOH HOH . D 4 HOH A 101 401 172 HOH HOH . D 4 HOH A 102 402 165 HOH HOH . D 4 HOH A 103 403 63 HOH HOH . D 4 HOH A 104 404 151 HOH HOH . D 4 HOH A 105 405 115 HOH HOH . D 4 HOH A 106 406 103 HOH HOH . D 4 HOH A 107 407 139 HOH HOH . D 4 HOH A 108 408 111 HOH HOH . D 4 HOH A 109 409 54 HOH HOH . D 4 HOH A 110 410 51 HOH HOH . D 4 HOH A 111 411 64 HOH HOH . D 4 HOH A 112 412 105 HOH HOH . D 4 HOH A 113 413 155 HOH HOH . D 4 HOH A 114 414 39 HOH HOH . D 4 HOH A 115 415 137 HOH HOH . D 4 HOH A 116 416 28 HOH HOH . D 4 HOH A 117 417 87 HOH HOH . D 4 HOH A 118 418 74 HOH HOH . D 4 HOH A 119 419 169 HOH HOH . D 4 HOH A 120 420 141 HOH HOH . D 4 HOH A 121 421 167 HOH HOH . D 4 HOH A 122 422 24 HOH HOH . D 4 HOH A 123 423 68 HOH HOH . D 4 HOH A 124 424 148 HOH HOH . D 4 HOH A 125 425 90 HOH HOH . D 4 HOH A 126 426 144 HOH HOH . D 4 HOH A 127 427 73 HOH HOH . D 4 HOH A 128 428 22 HOH HOH . D 4 HOH A 129 429 81 HOH HOH . D 4 HOH A 130 430 106 HOH HOH . D 4 HOH A 131 431 26 HOH HOH . D 4 HOH A 132 432 67 HOH HOH . D 4 HOH A 133 433 133 HOH HOH . D 4 HOH A 134 434 132 HOH HOH . D 4 HOH A 135 435 168 HOH HOH . D 4 HOH A 136 436 181 HOH HOH . D 4 HOH A 137 437 69 HOH HOH . D 4 HOH A 138 438 114 HOH HOH . D 4 HOH A 139 439 33 HOH HOH . D 4 HOH A 140 440 92 HOH HOH . D 4 HOH A 141 441 80 HOH HOH . D 4 HOH A 142 442 138 HOH HOH . D 4 HOH A 143 443 120 HOH HOH . D 4 HOH A 144 444 170 HOH HOH . D 4 HOH A 145 445 91 HOH HOH . D 4 HOH A 146 446 72 HOH HOH . D 4 HOH A 147 447 99 HOH HOH . D 4 HOH A 148 448 79 HOH HOH . D 4 HOH A 149 449 52 HOH HOH . D 4 HOH A 150 450 182 HOH HOH . D 4 HOH A 151 451 88 HOH HOH . D 4 HOH A 152 452 128 HOH HOH . D 4 HOH A 153 453 84 HOH HOH . D 4 HOH A 154 454 97 HOH HOH . D 4 HOH A 155 455 162 HOH HOH . D 4 HOH A 156 456 119 HOH HOH . D 4 HOH A 157 457 71 HOH HOH . D 4 HOH A 158 458 98 HOH HOH . D 4 HOH A 159 459 124 HOH HOH . D 4 HOH A 160 460 100 HOH HOH . D 4 HOH A 161 461 37 HOH HOH . D 4 HOH A 162 462 78 HOH HOH . D 4 HOH A 163 463 56 HOH HOH . D 4 HOH A 164 464 131 HOH HOH . D 4 HOH A 165 465 113 HOH HOH . D 4 HOH A 166 466 112 HOH HOH . D 4 HOH A 167 467 121 HOH HOH . D 4 HOH A 168 468 86 HOH HOH . D 4 HOH A 169 469 76 HOH HOH . D 4 HOH A 170 470 184 HOH HOH . D 4 HOH A 171 471 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE8 . . . C 3 -15.618 24.024 12.736 1 29.33 ? O1 PE8 202 A 1 HETATM 2 C C2 PE8 . . . C 3 -16.603 24.593 11.902 1 22.23 ? C2 PE8 202 A 1 HETATM 3 C C3 PE8 . . . C 3 -18.007 24.107 12.27 1 26.02 ? C3 PE8 202 A 1 HETATM 4 O O4 PE8 . . . C 3 -19.047 24.543 11.415 1 18.61 ? O4 PE8 202 A 1 HETATM 5 C C5 PE8 . . . C 3 -19.814 23.451 10.938 1 15.94 ? C5 PE8 202 A 1 HETATM 6 C C6 PE8 . . . C 3 -21.273 23.83 10.693 1 10.87 ? C6 PE8 202 A 1 HETATM 7 O O7 PE8 . . . C 3 -21.379 24.569 9.504 1 10.66 ? O7 PE8 202 A 1 HETATM 8 C C8 PE8 . . . C 3 -22.689 24.954 9.193 1 11.97 ? C8 PE8 202 A 1 HETATM 9 C C9 PE8 . . . C 3 -22.675 25.815 7.935 1 12.46 ? C9 PE8 202 A 1 HETATM 10 O O10 PE8 . . . C 3 -22.306 27.127 8.263 1 8.3 ? O10 PE8 202 A 1 HETATM 11 C C11 PE8 . . . C 3 -22.436 28.009 7.183 1 9.32 ? C11 PE8 202 A 1 HETATM 12 C C12 PE8 . . . C 3 -21.911 29.396 7.59 1 9.84 ? C12 PE8 202 A 1 HETATM 13 O O13 PE8 . . . C 3 -20.544 29.313 7.884 1 10.85 ? O13 PE8 202 A 1 HETATM 14 C C14 PE8 . . . C 3 -19.891 30.559 7.853 1 12.13 ? C14 PE8 202 A 1 HETATM 15 C C15 PE8 . . . C 3 -18.413 30.338 8.159 1 9.16 ? C15 PE8 202 A 1 HETATM 16 O O16 PE8 . . . C 3 -17.833 29.609 7.109 1 13.83 ? O16 PE8 202 A 1 HETATM 17 C C17 PE8 . . . C 3 -16.45 29.398 7.24 1 12.67 ? C17 PE8 202 A 1 HETATM 18 C C18 PE8 . . . C 3 -15.961 28.569 6.06 1 11.7 ? C18 PE8 202 A 1 HETATM 19 O O19 PE8 . . . C 3 -16.447 29.119 4.859 1 13.4 ? O19 PE8 202 A 1 HETATM 20 C C20 PE8 . . . C 3 -15.954 28.444 3.734 1 15.29 ? C20 PE8 202 A 1 HETATM 21 C C21 PE8 . . . C 3 -16.647 28.919 2.462 1 17.07 ? C21 PE8 202 A 1 HETATM 22 O O22 PE8 . . . C 3 -18.03 28.725 2.59 1 22.76 ? O22 PE8 202 A 1 HETATM 23 C C23 PE8 . . . C 3 -18.724 28.628 1.369 1 24.17 ? C23 PE8 202 A 1 HETATM 24 C C24 PE8 . . . C 3 -20.089 29.313 1.461 1 33.31 ? C24 PE8 202 A 1 HETATM 25 O O25 PE8 . . . C 3 -21.023 28.48 2.084 1 25.19 ? O25 PE8 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #