data_7EMG
#
_model_server_result.job_id            D96qseGhsdIb_RWP_GMFbw 
_model_server_result.datetime_utc      '2025-07-08 12:21:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7emg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    7EMG 
#
_exptl.entry_id    7EMG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EMG 
_cell.length_a            63.841 
_cell.length_b            120.299 
_cell.length_c            120.664 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EMG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7EMG 
_atom_sites.fract_transf_matrix[1][1]    0.015664 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008287 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 301 245 NDP NDP . 
D 3 EDO A 1 302 1 EDO EDO . 
E 2 NDP B 1 301 245 NDP NDP . 
F 4 HOH A 1 401 48 HOH HOH . 
F 4 HOH A 2 402 16 HOH HOH . 
F 4 HOH A 3 403 3 HOH HOH . 
F 4 HOH A 4 404 14 HOH HOH . 
F 4 HOH A 5 405 25 HOH HOH . 
F 4 HOH A 6 406 13 HOH HOH . 
F 4 HOH A 7 407 54 HOH HOH . 
F 4 HOH A 8 408 7 HOH HOH . 
F 4 HOH A 9 409 30 HOH HOH . 
F 4 HOH A 10 410 29 HOH HOH . 
F 4 HOH A 11 411 12 HOH HOH . 
F 4 HOH A 12 412 56 HOH HOH . 
F 4 HOH A 13 413 41 HOH HOH . 
F 4 HOH A 14 414 20 HOH HOH . 
F 4 HOH A 15 415 24 HOH HOH . 
F 4 HOH A 16 416 22 HOH HOH . 
F 4 HOH A 17 417 58 HOH HOH . 
F 4 HOH A 18 418 2 HOH HOH . 
F 4 HOH A 19 419 45 HOH HOH . 
F 4 HOH A 20 420 50 HOH HOH . 
F 4 HOH A 21 421 5 HOH HOH . 
F 4 HOH A 22 422 27 HOH HOH . 
F 4 HOH A 23 423 17 HOH HOH . 
F 4 HOH A 24 424 35 HOH HOH . 
F 4 HOH A 25 425 38 HOH HOH . 
F 4 HOH A 26 426 57 HOH HOH . 
F 4 HOH A 27 427 59 HOH HOH . 
G 4 HOH B 1 401 60 HOH HOH . 
G 4 HOH B 2 402 23 HOH HOH . 
G 4 HOH B 3 403 46 HOH HOH . 
G 4 HOH B 4 404 53 HOH HOH . 
G 4 HOH B 5 405 15 HOH HOH . 
G 4 HOH B 6 406 11 HOH HOH . 
G 4 HOH B 7 407 37 HOH HOH . 
G 4 HOH B 8 408 1 HOH HOH . 
G 4 HOH B 9 409 49 HOH HOH . 
G 4 HOH B 10 410 21 HOH HOH . 
G 4 HOH B 11 411 4 HOH HOH . 
G 4 HOH B 12 412 40 HOH HOH . 
G 4 HOH B 13 413 34 HOH HOH . 
G 4 HOH B 14 414 6 HOH HOH . 
G 4 HOH B 15 415 26 HOH HOH . 
G 4 HOH B 16 416 19 HOH HOH . 
G 4 HOH B 17 417 32 HOH HOH . 
G 4 HOH B 18 418 9 HOH HOH . 
G 4 HOH B 19 419 36 HOH HOH . 
G 4 HOH B 20 420 31 HOH HOH . 
G 4 HOH B 21 421 39 HOH HOH . 
G 4 HOH B 22 422 43 HOH HOH . 
G 4 HOH B 23 423 18 HOH HOH . 
G 4 HOH B 24 424 42 HOH HOH . 
G 4 HOH B 25 425 51 HOH HOH . 
G 4 HOH B 26 426 33 HOH HOH . 
G 4 HOH B 27 427 55 HOH HOH . 
G 4 HOH B 28 428 8 HOH HOH . 
G 4 HOH B 29 429 52 HOH HOH . 
G 4 HOH B 30 430 44 HOH HOH . 
G 4 HOH B 31 431 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 -16.723 -8.856 -34.449 1 38.73 ? C1 EDO 302 A 1 
HETATM 2 O O1 EDO . . . D 3 -17.289 -10.114 -34.063 1 41.65 ? O1 EDO 302 A 1 
HETATM 3 C C2 EDO . . . D 3 -17.815 -7.794 -34.449 1 41.94 ? C2 EDO 302 A 1 
HETATM 4 O O2 EDO . . . D 3 -18.482 -7.803 -33.181 1 39.21 ? O2 EDO 302 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#