data_7EMV # _model_server_result.job_id 9o0ElSlYAOZKLOmSBN8rEA _model_server_result.datetime_utc '2024-11-08 14:49:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7emv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7EMV # _exptl.entry_id 7EMV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 592.469 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5,10,15-Triphenylporphyrin cpntaining FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EMV _cell.length_a 84.347 _cell.length_b 84.347 _cell.length_c 45.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 32 A HIS 32 1_555 B FE WXP . A WXP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 A OH TYR 75 A TYR 75 1_555 B FE WXP . A WXP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? # _chem_comp.formula 'C38 H24 Fe N4' _chem_comp.formula_weight 592.469 _chem_comp.id WXP _chem_comp.mon_nstd_flag . _chem_comp.name '5,10,15-Triphenylporphyrin cpntaining FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBD CBC WXP doub 386 n y CBD CBE WXP sing 387 n y CBM CBN WXP doub 388 n y CBM CBL WXP sing 389 n y CBC CBB WXP sing 390 n y CBE CAZ WXP doub 391 n y CBN CBO WXP sing 392 n y CBL CBK WXP doub 393 n y CAP CAQ WXP doub 394 n n CAP CAO WXP sing 395 n n CAQ CAR WXP sing 396 n n CBB CBA WXP doub 397 n y CAZ CBA WXP sing 398 n y CAZ CAB WXP sing 399 n n CBO CBP WXP doub 400 n y CBK CBP WXP sing 401 n y CBK CAC WXP sing 402 n n CAO CAB WXP doub 403 n n CAO NAS WXP sing 404 n n CAR CAC WXP sing 405 n n CAR NAS WXP doub 406 n n CAB CAM WXP sing 407 n n CAC CAT WXP doub 408 n n NAS FE WXP sing 409 n n CAM CAL WXP doub 410 n y CAM NAN WXP sing 411 n y CAT CAU WXP sing 412 n n CAT NAX WXP sing 413 n n CAL CAK WXP sing 414 n y NAN FE WXP sing 415 n n NAN CAJ WXP sing 416 n y CAU CAV WXP doub 417 n n FE NAX WXP sing 418 n n FE NAI WXP sing 419 n n NAX CAW WXP sing 420 n n CAK CAJ WXP doub 421 n y CAJ CAA WXP sing 422 n n CAV CAW WXP sing 423 n n CAW CAD WXP doub 424 n n NAI CAH WXP sing 425 n n NAI CAE WXP doub 426 n n CAA CAH WXP doub 427 n n CBJ CBI WXP doub 428 n y CBJ CAY WXP sing 429 n y CAD CAE WXP sing 430 n n CAD CAY WXP sing 431 n n CAH CAG WXP sing 432 n n CAE CAF WXP sing 433 n n CBI CBH WXP sing 434 n y CAY CBF WXP doub 435 n y CAG CAF WXP doub 436 n n CBH CBG WXP doub 437 n y CBF CBG WXP sing 438 n y CBL H1 WXP sing 439 n n CBM H2 WXP sing 440 n n CBN H3 WXP sing 441 n n CBO H4 WXP sing 442 n n CBP H5 WXP sing 443 n n CAU H6 WXP sing 444 n n CAV H7 WXP sing 445 n n CAQ H8 WXP sing 446 n n CAP H9 WXP sing 447 n n CBA H10 WXP sing 448 n n CBB H11 WXP sing 449 n n CBC H12 WXP sing 450 n n CBD H13 WXP sing 451 n n CBE H14 WXP sing 452 n n CAA H17 WXP sing 453 n n CAG H18 WXP sing 454 n n CAF H19 WXP sing 455 n n CBF H20 WXP sing 456 n n CBG H21 WXP sing 457 n n CBH H22 WXP sing 458 n n CBI H23 WXP sing 459 n n CBJ H24 WXP sing 460 n n CAL H15 WXP sing 461 n n CAK H16 WXP sing 462 n n # _atom_sites.entry_id 7EMV _atom_sites.fract_transf_matrix[1][1] 0.011856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WXP A 1 201 201 WXP WXP . C 3 IMD A 1 202 301 IMD IMD . D 4 GOL A 1 203 401 GOL GOL . E 5 HOH A 1 301 35 HOH HOH . E 5 HOH A 2 302 118 HOH HOH . E 5 HOH A 3 303 67 HOH HOH . E 5 HOH A 4 304 127 HOH HOH . E 5 HOH A 5 305 32 HOH HOH . E 5 HOH A 6 306 92 HOH HOH . E 5 HOH A 7 307 38 HOH HOH . E 5 HOH A 8 308 37 HOH HOH . E 5 HOH A 9 309 128 HOH HOH . E 5 HOH A 10 310 132 HOH HOH . E 5 HOH A 11 311 42 HOH HOH . E 5 HOH A 12 312 9 HOH HOH . E 5 HOH A 13 313 58 HOH HOH . E 5 HOH A 14 314 109 HOH HOH . E 5 HOH A 15 315 55 HOH HOH . E 5 HOH A 16 316 54 HOH HOH . E 5 HOH A 17 317 110 HOH HOH . E 5 HOH A 18 318 10 HOH HOH . E 5 HOH A 19 319 83 HOH HOH . E 5 HOH A 20 320 72 HOH HOH . E 5 HOH A 21 321 57 HOH HOH . E 5 HOH A 22 322 64 HOH HOH . E 5 HOH A 23 323 187 HOH HOH . E 5 HOH A 24 324 1 HOH HOH . E 5 HOH A 25 325 45 HOH HOH . E 5 HOH A 26 326 13 HOH HOH . E 5 HOH A 27 327 112 HOH HOH . E 5 HOH A 28 328 49 HOH HOH . E 5 HOH A 29 329 84 HOH HOH . E 5 HOH A 30 330 22 HOH HOH . E 5 HOH A 31 331 14 HOH HOH . E 5 HOH A 32 332 91 HOH HOH . E 5 HOH A 33 333 25 HOH HOH . E 5 HOH A 34 334 66 HOH HOH . E 5 HOH A 35 335 98 HOH HOH . E 5 HOH A 36 336 97 HOH HOH . E 5 HOH A 37 337 101 HOH HOH . E 5 HOH A 38 338 114 HOH HOH . E 5 HOH A 39 339 99 HOH HOH . E 5 HOH A 40 340 41 HOH HOH . E 5 HOH A 41 341 143 HOH HOH . E 5 HOH A 42 342 53 HOH HOH . E 5 HOH A 43 343 15 HOH HOH . E 5 HOH A 44 344 29 HOH HOH . E 5 HOH A 45 345 85 HOH HOH . E 5 HOH A 46 346 31 HOH HOH . E 5 HOH A 47 347 39 HOH HOH . E 5 HOH A 48 348 63 HOH HOH . E 5 HOH A 49 349 75 HOH HOH . E 5 HOH A 50 350 119 HOH HOH . E 5 HOH A 51 351 51 HOH HOH . E 5 HOH A 52 352 77 HOH HOH . E 5 HOH A 53 353 34 HOH HOH . E 5 HOH A 54 354 81 HOH HOH . E 5 HOH A 55 355 70 HOH HOH . E 5 HOH A 56 356 50 HOH HOH . E 5 HOH A 57 357 52 HOH HOH . E 5 HOH A 58 358 111 HOH HOH . E 5 HOH A 59 359 20 HOH HOH . E 5 HOH A 60 360 107 HOH HOH . E 5 HOH A 61 361 93 HOH HOH . E 5 HOH A 62 362 87 HOH HOH . E 5 HOH A 63 363 17 HOH HOH . E 5 HOH A 64 364 59 HOH HOH . E 5 HOH A 65 365 44 HOH HOH . E 5 HOH A 66 366 12 HOH HOH . E 5 HOH A 67 367 11 HOH HOH . E 5 HOH A 68 368 90 HOH HOH . E 5 HOH A 69 369 47 HOH HOH . E 5 HOH A 70 370 86 HOH HOH . E 5 HOH A 71 371 7 HOH HOH . E 5 HOH A 72 372 46 HOH HOH . E 5 HOH A 73 373 61 HOH HOH . E 5 HOH A 74 374 62 HOH HOH . E 5 HOH A 75 375 73 HOH HOH . E 5 HOH A 76 376 4 HOH HOH . E 5 HOH A 77 377 19 HOH HOH . E 5 HOH A 78 378 71 HOH HOH . E 5 HOH A 79 379 16 HOH HOH . E 5 HOH A 80 380 152 HOH HOH . E 5 HOH A 81 381 6 HOH HOH . E 5 HOH A 82 382 78 HOH HOH . E 5 HOH A 83 383 48 HOH HOH . E 5 HOH A 84 384 56 HOH HOH . E 5 HOH A 85 385 188 HOH HOH . E 5 HOH A 86 386 60 HOH HOH . E 5 HOH A 87 387 89 HOH HOH . E 5 HOH A 88 388 33 HOH HOH . E 5 HOH A 89 389 69 HOH HOH . E 5 HOH A 90 390 74 HOH HOH . E 5 HOH A 91 391 121 HOH HOH . E 5 HOH A 92 392 5 HOH HOH . E 5 HOH A 93 393 28 HOH HOH . E 5 HOH A 94 394 26 HOH HOH . E 5 HOH A 95 395 36 HOH HOH . E 5 HOH A 96 396 142 HOH HOH . E 5 HOH A 97 397 27 HOH HOH . E 5 HOH A 98 398 79 HOH HOH . E 5 HOH A 99 399 116 HOH HOH . E 5 HOH A 100 400 21 HOH HOH . E 5 HOH A 101 401 135 HOH HOH . E 5 HOH A 102 402 105 HOH HOH . E 5 HOH A 103 403 18 HOH HOH . E 5 HOH A 104 404 115 HOH HOH . E 5 HOH A 105 405 24 HOH HOH . E 5 HOH A 106 406 3 HOH HOH . E 5 HOH A 107 407 186 HOH HOH . E 5 HOH A 108 408 8 HOH HOH . E 5 HOH A 109 409 184 HOH HOH . E 5 HOH A 110 410 104 HOH HOH . E 5 HOH A 111 411 175 HOH HOH . E 5 HOH A 112 412 172 HOH HOH . E 5 HOH A 113 413 102 HOH HOH . E 5 HOH A 114 414 76 HOH HOH . E 5 HOH A 115 415 173 HOH HOH . E 5 HOH A 116 416 174 HOH HOH . E 5 HOH A 117 417 23 HOH HOH . E 5 HOH A 118 418 123 HOH HOH . E 5 HOH A 119 419 177 HOH HOH . E 5 HOH A 120 420 80 HOH HOH . E 5 HOH A 121 421 108 HOH HOH . E 5 HOH A 122 422 82 HOH HOH . E 5 HOH A 123 423 183 HOH HOH . E 5 HOH A 124 424 181 HOH HOH . E 5 HOH A 125 425 162 HOH HOH . E 5 HOH A 126 426 30 HOH HOH . E 5 HOH A 127 427 117 HOH HOH . E 5 HOH A 128 428 138 HOH HOH . E 5 HOH A 129 429 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBL WXP . . . B 2 23.413 -12.542 14.213 1 25.11 ? CBL WXP 201 A 1 HETATM 2 C CBM WXP . . . B 2 23.284 -12.982 15.51 1 28.3 ? CBM WXP 201 A 1 HETATM 3 C CBN WXP . . . B 2 23.406 -14.268 15.777 1 25.44 ? CBN WXP 201 A 1 HETATM 4 C CBO WXP . . . B 2 23.532 -15.21 14.762 1 26.71 ? CBO WXP 201 A 1 HETATM 5 C CBP WXP . . . B 2 23.645 -14.749 13.426 1 26.76 ? CBP WXP 201 A 1 HETATM 6 C CBK WXP . . . B 2 23.601 -13.4 13.136 1 23.54 ? CBK WXP 201 A 1 HETATM 7 C CAC WXP . . . B 2 23.746 -12.903 11.777 1 20.71 ? CAC WXP 201 A 1 HETATM 8 C CAT WXP . . . B 2 24.834 -12.014 11.564 1 19.57 ? CAT WXP 201 A 1 HETATM 9 C CAU WXP . . . B 2 25.843 -11.597 12.428 1 22.89 ? CAU WXP 201 A 1 HETATM 10 C CAV WXP . . . B 2 26.727 -10.746 11.794 1 19.38 ? CAV WXP 201 A 1 HETATM 11 C CAW WXP . . . B 2 26.258 -10.631 10.48 1 19.38 ? CAW WXP 201 A 1 HETATM 12 N NAX WXP . . . B 2 25.131 -11.433 10.324 1 19.03 ? NAX WXP 201 A 1 HETATM 13 C CAR WXP . . . B 2 22.834 -13.353 10.868 1 23.22 ? CAR WXP 201 A 1 HETATM 14 N NAS WXP . . . B 2 22.727 -12.993 9.549 1 20.51 ? NAS WXP 201 A 1 HETATM 15 C CAQ WXP . . . B 2 21.769 -14.22 11.073 1 24.82 ? CAQ WXP 201 A 1 HETATM 16 C CAP WXP . . . B 2 21.09 -14.39 9.956 1 23.42 ? CAP WXP 201 A 1 HETATM 17 C CAO WXP . . . B 2 21.675 -13.626 8.961 1 22.21 ? CAO WXP 201 A 1 HETATM 18 C CAB WXP . . . B 2 21.304 -13.529 7.663 1 20.65 ? CAB WXP 201 A 1 HETATM 19 C CAZ WXP . . . B 2 20.179 -14.372 7.252 1 21.87 ? CAZ WXP 201 A 1 HETATM 20 C CBA WXP . . . B 2 20.2 -15.707 7.132 1 21.95 ? CBA WXP 201 A 1 HETATM 21 C CBB WXP . . . B 2 19.114 -16.456 6.731 1 24.58 ? CBB WXP 201 A 1 HETATM 22 C CBC WXP . . . B 2 17.927 -15.911 6.41 1 23.67 ? CBC WXP 201 A 1 HETATM 23 C CBD WXP . . . B 2 17.882 -14.557 6.387 1 23.49 ? CBD WXP 201 A 1 HETATM 24 C CBE WXP . . . B 2 18.979 -13.808 6.786 1 21.67 ? CBE WXP 201 A 1 HETATM 25 C CAM WXP . . . B 2 21.806 -12.64 6.739 1 21.32 ? CAM WXP 201 A 1 HETATM 26 N NAN WXP . . . B 2 22.869 -11.789 6.923 1 17.65 ? NAN WXP 201 A 1 HETATM 27 C CAL WXP . . . B 2 21.333 -12.453 5.466 1 19.03 ? CAL WXP 201 A 1 HETATM 28 C CAK WXP . . . B 2 22.091 -11.501 4.834 1 18.18 ? CAK WXP 201 A 1 HETATM 29 C CAJ WXP . . . B 2 23.062 -11.101 5.771 1 20.57 ? CAJ WXP 201 A 1 HETATM 30 C CAA WXP . . . B 2 24.01 -10.179 5.576 1 15.99 ? CAA WXP 201 A 1 HETATM 31 C CAH WXP . . . B 2 25.037 -9.861 6.404 1 19.16 ? CAH WXP 201 A 1 HETATM 32 N NAI WXP . . . B 2 25.188 -10.31 7.696 1 17.5 ? NAI WXP 201 A 1 HETATM 33 C CAG WXP . . . B 2 26.071 -8.995 6.103 1 17.34 ? CAG WXP 201 A 1 HETATM 34 C CAF WXP . . . B 2 26.884 -8.937 7.161 1 17.61 ? CAF WXP 201 A 1 HETATM 35 C CAE WXP . . . B 2 26.358 -9.744 8.184 1 18.7 ? CAE WXP 201 A 1 HETATM 36 C CAD WXP . . . B 2 26.85 -9.939 9.472 1 19.54 ? CAD WXP 201 A 1 HETATM 37 C CAY WXP . . . B 2 28.039 -9.187 9.833 1 19.21 ? CAY WXP 201 A 1 HETATM 38 C CBF WXP . . . B 2 28.041 -7.805 9.835 1 19.43 ? CBF WXP 201 A 1 HETATM 39 C CBG WXP . . . B 2 29.217 -7.043 10.091 1 20.35 ? CBG WXP 201 A 1 HETATM 40 C CBH WXP . . . B 2 30.363 -7.71 10.417 1 22.46 ? CBH WXP 201 A 1 HETATM 41 C CBI WXP . . . B 2 30.375 -9.102 10.469 1 22.62 ? CBI WXP 201 A 1 HETATM 42 C CBJ WXP . . . B 2 29.232 -9.799 10.148 1 20.32 ? CBJ WXP 201 A 1 HETATM 43 FE FE WXP . . . B 2 23.976 -11.627 8.651 1 17.56 ? FE WXP 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 43 #