data_7EMW # _model_server_result.job_id oD4rzz0EtvHYCFd0VDwb7w _model_server_result.datetime_utc '2024-11-08 15:35:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7emw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7EMW # _exptl.entry_id 7EMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EMW _cell.length_a 48.7 _cell.length_b 58.34 _cell.length_c 65.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 77 A TYR 75 1_555 B FE MQP . A MQP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 B FE MQP . A MQP 201 1_555 D O HOH . A HOH 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 7EMW _atom_sites.fract_transf_matrix[1][1] 0.020534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015309 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MQP A 1 201 201 MQP MQP . C 3 GOL A 1 202 202 GOL GOL . D 4 HOH A 1 301 436 HOH HOH . D 4 HOH A 2 302 431 HOH HOH . D 4 HOH A 3 303 365 HOH HOH . D 4 HOH A 4 304 350 HOH HOH . D 4 HOH A 5 305 417 HOH HOH . D 4 HOH A 6 306 303 HOH HOH . D 4 HOH A 7 307 338 HOH HOH . D 4 HOH A 8 308 305 HOH HOH . D 4 HOH A 9 309 360 HOH HOH . D 4 HOH A 10 310 421 HOH HOH . D 4 HOH A 11 311 390 HOH HOH . D 4 HOH A 12 312 364 HOH HOH . D 4 HOH A 13 313 373 HOH HOH . D 4 HOH A 14 314 394 HOH HOH . D 4 HOH A 15 315 366 HOH HOH . D 4 HOH A 16 316 329 HOH HOH . D 4 HOH A 17 317 344 HOH HOH . D 4 HOH A 18 318 424 HOH HOH . D 4 HOH A 19 319 377 HOH HOH . D 4 HOH A 20 320 348 HOH HOH . D 4 HOH A 21 321 363 HOH HOH . D 4 HOH A 22 322 320 HOH HOH . D 4 HOH A 23 323 432 HOH HOH . D 4 HOH A 24 324 422 HOH HOH . D 4 HOH A 25 325 396 HOH HOH . D 4 HOH A 26 326 367 HOH HOH . D 4 HOH A 27 327 318 HOH HOH . D 4 HOH A 28 328 388 HOH HOH . D 4 HOH A 29 329 317 HOH HOH . D 4 HOH A 30 330 315 HOH HOH . D 4 HOH A 31 331 353 HOH HOH . D 4 HOH A 32 332 306 HOH HOH . D 4 HOH A 33 333 356 HOH HOH . D 4 HOH A 34 334 416 HOH HOH . D 4 HOH A 35 335 355 HOH HOH . D 4 HOH A 36 336 404 HOH HOH . D 4 HOH A 37 337 380 HOH HOH . D 4 HOH A 38 338 418 HOH HOH . D 4 HOH A 39 339 399 HOH HOH . D 4 HOH A 40 340 342 HOH HOH . D 4 HOH A 41 341 354 HOH HOH . D 4 HOH A 42 342 415 HOH HOH . D 4 HOH A 43 343 362 HOH HOH . D 4 HOH A 44 344 403 HOH HOH . D 4 HOH A 45 345 309 HOH HOH . D 4 HOH A 46 346 319 HOH HOH . D 4 HOH A 47 347 346 HOH HOH . D 4 HOH A 48 348 333 HOH HOH . D 4 HOH A 49 349 301 HOH HOH . D 4 HOH A 50 350 395 HOH HOH . D 4 HOH A 51 351 352 HOH HOH . D 4 HOH A 52 352 401 HOH HOH . D 4 HOH A 53 353 359 HOH HOH . D 4 HOH A 54 354 402 HOH HOH . D 4 HOH A 55 355 429 HOH HOH . D 4 HOH A 56 356 340 HOH HOH . D 4 HOH A 57 357 337 HOH HOH . D 4 HOH A 58 358 425 HOH HOH . D 4 HOH A 59 359 334 HOH HOH . D 4 HOH A 60 360 302 HOH HOH . D 4 HOH A 61 361 386 HOH HOH . D 4 HOH A 62 362 343 HOH HOH . D 4 HOH A 63 363 341 HOH HOH . D 4 HOH A 64 364 339 HOH HOH . D 4 HOH A 65 365 357 HOH HOH . D 4 HOH A 66 366 406 HOH HOH . D 4 HOH A 67 367 428 HOH HOH . D 4 HOH A 68 368 328 HOH HOH . D 4 HOH A 69 369 330 HOH HOH . D 4 HOH A 70 370 392 HOH HOH . D 4 HOH A 71 371 412 HOH HOH . D 4 HOH A 72 372 391 HOH HOH . D 4 HOH A 73 373 413 HOH HOH . D 4 HOH A 74 374 322 HOH HOH . D 4 HOH A 75 375 316 HOH HOH . D 4 HOH A 76 376 371 HOH HOH . D 4 HOH A 77 377 311 HOH HOH . D 4 HOH A 78 378 351 HOH HOH . D 4 HOH A 79 379 325 HOH HOH . D 4 HOH A 80 380 326 HOH HOH . D 4 HOH A 81 381 374 HOH HOH . D 4 HOH A 82 382 327 HOH HOH . D 4 HOH A 83 383 408 HOH HOH . D 4 HOH A 84 384 332 HOH HOH . D 4 HOH A 85 385 383 HOH HOH . D 4 HOH A 86 386 335 HOH HOH . D 4 HOH A 87 387 304 HOH HOH . D 4 HOH A 88 388 372 HOH HOH . D 4 HOH A 89 389 313 HOH HOH . D 4 HOH A 90 390 312 HOH HOH . D 4 HOH A 91 391 384 HOH HOH . D 4 HOH A 92 392 324 HOH HOH . D 4 HOH A 93 393 314 HOH HOH . D 4 HOH A 94 394 321 HOH HOH . D 4 HOH A 95 395 336 HOH HOH . D 4 HOH A 96 396 430 HOH HOH . D 4 HOH A 97 397 427 HOH HOH . D 4 HOH A 98 398 435 HOH HOH . D 4 HOH A 99 399 323 HOH HOH . D 4 HOH A 100 400 397 HOH HOH . D 4 HOH A 101 401 382 HOH HOH . D 4 HOH A 102 402 308 HOH HOH . D 4 HOH A 103 403 419 HOH HOH . D 4 HOH A 104 404 378 HOH HOH . D 4 HOH A 105 405 307 HOH HOH . D 4 HOH A 106 406 398 HOH HOH . D 4 HOH A 107 407 381 HOH HOH . D 4 HOH A 108 408 414 HOH HOH . D 4 HOH A 109 409 347 HOH HOH . D 4 HOH A 110 410 361 HOH HOH . D 4 HOH A 111 411 420 HOH HOH . D 4 HOH A 112 412 426 HOH HOH . D 4 HOH A 113 413 310 HOH HOH . D 4 HOH A 114 414 405 HOH HOH . D 4 HOH A 115 415 376 HOH HOH . D 4 HOH A 116 416 385 HOH HOH . D 4 HOH A 117 417 409 HOH HOH . D 4 HOH A 118 418 400 HOH HOH . D 4 HOH A 119 419 393 HOH HOH . D 4 HOH A 120 420 358 HOH HOH . D 4 HOH A 121 421 379 HOH HOH . D 4 HOH A 122 422 369 HOH HOH . D 4 HOH A 123 423 331 HOH HOH . D 4 HOH A 124 424 423 HOH HOH . D 4 HOH A 125 425 434 HOH HOH . D 4 HOH A 126 426 375 HOH HOH . D 4 HOH A 127 427 411 HOH HOH . D 4 HOH A 128 428 389 HOH HOH . D 4 HOH A 129 429 345 HOH HOH . D 4 HOH A 130 430 368 HOH HOH . D 4 HOH A 131 431 387 HOH HOH . D 4 HOH A 132 432 407 HOH HOH . D 4 HOH A 133 433 433 HOH HOH . D 4 HOH A 134 434 370 HOH HOH . D 4 HOH A 135 435 437 HOH HOH . D 4 HOH A 136 436 349 HOH HOH . D 4 HOH A 137 437 438 HOH HOH . D 4 HOH A 138 438 410 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -27.733 -7.828 -12.617 1 37.51 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 3 -27.191 -8.673 -13.638 1 35.06 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 3 -27.652 -6.355 -12.973 1 38.39 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 3 -28.614 -6.047 -13.982 1 44.71 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 3 -27.854 -5.434 -11.782 1 32.34 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 3 -27.725 -4.051 -12.13 1 35.6 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 6 #