data_7EN0 # _model_server_result.job_id '_MHUi_xd-g0DT6AMKBYhYA' _model_server_result.datetime_utc '2025-03-06 20:07:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7en0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":602}' # _entry.id 7EN0 # _exptl.entry_id 7EN0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 299.492 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SPHINGOSINE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EN0 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EN0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # _chem_comp.formula 'C18 H37 N O2' _chem_comp.formula_weight 299.492 _chem_comp.id SPH _chem_comp.mon_nstd_flag . _chem_comp.name SPHINGOSINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 SPH sing 394 n n C1 C2 SPH sing 395 n n C1 H11 SPH sing 396 n n C1 H12 SPH sing 397 n n O1 HO1 SPH sing 398 n n C2 N2 SPH sing 399 n n C2 C3 SPH sing 400 n n C2 H2 SPH sing 401 n n N2 HN21 SPH sing 402 n n N2 HN22 SPH sing 403 n n C3 O3 SPH sing 404 n n C3 C4 SPH sing 405 n n C3 H3 SPH sing 406 n n O3 HO3 SPH sing 407 n n C4 C5 SPH doub 408 z n C4 H4 SPH sing 409 n n C5 C6 SPH sing 410 n n C5 H5 SPH sing 411 n n C6 C7 SPH sing 412 n n C6 H61 SPH sing 413 n n C6 H62 SPH sing 414 n n C7 C8 SPH sing 415 n n C7 H71 SPH sing 416 n n C7 H72 SPH sing 417 n n C8 C9 SPH sing 418 n n C8 H81 SPH sing 419 n n C8 H82 SPH sing 420 n n C9 C10 SPH sing 421 n n C9 H91 SPH sing 422 n n C9 H92 SPH sing 423 n n C10 C11 SPH sing 424 n n C10 H101 SPH sing 425 n n C10 H102 SPH sing 426 n n C11 C12 SPH sing 427 n n C11 H111 SPH sing 428 n n C11 H112 SPH sing 429 n n C12 C13 SPH sing 430 n n C12 H121 SPH sing 431 n n C12 H122 SPH sing 432 n n C13 C14 SPH sing 433 n n C13 H131 SPH sing 434 n n C13 H132 SPH sing 435 n n C14 C15 SPH sing 436 n n C14 H141 SPH sing 437 n n C14 H142 SPH sing 438 n n C15 C16 SPH sing 439 n n C15 H151 SPH sing 440 n n C15 H152 SPH sing 441 n n C16 C17 SPH sing 442 n n C16 H161 SPH sing 443 n n C16 H162 SPH sing 444 n n C17 C18 SPH sing 445 n n C17 H171 SPH sing 446 n n C17 H172 SPH sing 447 n n C18 H181 SPH sing 448 n n C18 H182 SPH sing 449 n n C18 H183 SPH sing 450 n n # _atom_sites.entry_id 7EN0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PLC A 1 601 601 PLC PLC . E 3 SPH A 1 602 701 SPH SPH . F 2 PLC B 1 601 601 PLC PLC . G 3 SPH B 1 602 701 SPH SPH . H 2 PLC C 1 601 601 PLC PLC . I 3 SPH C 1 602 701 SPH SPH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SPH . . . G 3 104.207 108.73 118.529 1 67.67 ? C1 SPH 602 B 1 HETATM 2 O O1 SPH . . . G 3 103.646 109.665 119.42 1 67.67 ? O1 SPH 602 B 1 HETATM 3 C C2 SPH . . . G 3 103.491 107.397 118.705 1 67.67 ? C2 SPH 602 B 1 HETATM 4 N N2 SPH . . . G 3 102.115 107.631 119.095 1 67.67 ? N2 SPH 602 B 1 HETATM 5 C C3 SPH . . . G 3 103.541 106.519 117.46 1 67.67 ? C3 SPH 602 B 1 HETATM 6 O O3 SPH . . . G 3 102.332 105.82 117.272 1 67.67 ? O3 SPH 602 B 1 HETATM 7 C C4 SPH . . . G 3 103.946 107.244 116.209 1 67.67 ? C4 SPH 602 B 1 HETATM 8 C C5 SPH . . . G 3 103.725 106.587 114.91 1 67.67 ? C5 SPH 602 B 1 HETATM 9 C C6 SPH . . . G 3 104.259 107.172 113.622 1 67.67 ? C6 SPH 602 B 1 HETATM 10 C C7 SPH . . . G 3 103.115 107.568 112.699 1 67.67 ? C7 SPH 602 B 1 HETATM 11 C C8 SPH . . . G 3 103.63 108.301 111.466 1 67.67 ? C8 SPH 602 B 1 HETATM 12 C C9 SPH . . . G 3 103.585 107.427 110.22 1 67.67 ? C9 SPH 602 B 1 HETATM 13 C C10 SPH . . . G 3 102.194 106.838 110.036 1 67.67 ? C10 SPH 602 B 1 HETATM 14 C C11 SPH . . . G 3 101.719 106.874 108.589 1 67.67 ? C11 SPH 602 B 1 HETATM 15 C C12 SPH . . . G 3 102.804 106.473 107.596 1 67.67 ? C12 SPH 602 B 1 HETATM 16 C C13 SPH . . . G 3 102.289 106.478 106.159 1 67.67 ? C13 SPH 602 B 1 HETATM 17 C C14 SPH . . . G 3 101.07 107.379 105.988 1 67.67 ? C14 SPH 602 B 1 HETATM 18 C C15 SPH . . . G 3 100.766 107.648 104.521 1 67.67 ? C15 SPH 602 B 1 HETATM 19 C C16 SPH . . . G 3 100.034 106.478 103.881 1 67.67 ? C16 SPH 602 B 1 HETATM 20 C C17 SPH . . . G 3 99.657 106.795 102.441 1 67.67 ? C17 SPH 602 B 1 HETATM 21 C C18 SPH . . . G 3 100.881 107.196 101.631 1 67.67 ? C18 SPH 602 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #