data_7EN3
#
_model_server_result.job_id            8h2QedeDBkIc2rV_bjov2w 
_model_server_result.datetime_utc      '2024-12-28 22:43:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7en3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":502}' 
#
_entry.id    7EN3 
#
_exptl.entry_id    7EN3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EN3 
_cell.length_a            104.607 
_cell.length_b            154.216 
_cell.length_c            186.865 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EN3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 K N N 
? 6 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? 
metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? 
metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc10 H MG MG . A MG 502 1_555 V O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc11 H MG MG . A MG 502 1_555 V O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc12 H MG MG . A MG 502 1_555 V O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc13 H MG MG . A MG 502 1_555 V O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc14 B OE1 GLU 69 B GLU 69 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? 
metalc ? metalc15 J O1B GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? 
metalc ? metalc16 K MG MG . B MG 502 1_555 W O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? 
metalc ? metalc17 K MG MG . B MG 502 1_555 W O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc18 K MG MG . B MG 502 1_555 W O HOH . B HOH 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc19 C OD1 ASP 39 C ASP 39 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? 
metalc ? metalc20 C OD2 ASP 39 C ASP 39 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
metalc ? metalc21 C O THR 41 C THR 41 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc22 C OG1 THR 41 C THR 41 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc23 C O GLY 44 C GLY 44 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc24 C OE1 GLU 55 C GLU 55 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc25 C OE2 GLU 55 C GLU 55 1_555 R CA CA . C CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc26 P O3G GTP . C GTP 502 1_555 Q MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc27 P O1B GTP . C GTP 502 1_555 Q MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc28 Q MG MG . C MG 503 1_555 X O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc29 Q MG MG . C MG 503 1_555 X O HOH . C HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc30 Q MG MG . C MG 503 1_555 X O HOH . C HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc31 Q MG MG . C MG 503 1_555 X O HOH . C HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7EN3 
_atom_sites.fract_transf_matrix[1][1]    0.00956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006484 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005351 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 GTP A 1 501 501 GTP GTP . 
H 6 MG A 1 502 502 MG MG . 
I 7 CA A 1 503 503 CA CA . 
J 8 GDP B 1 501 501 GDP GDP . 
K 6 MG B 1 502 502 MG MG . 
L 9 MES B 1 503 505 MES MES . 
M 9 MES B 1 504 506 MES MES . 
N 10 J6R B 1 505 1 J6R TGL . 
O 9 MES C 1 501 507 MES MES . 
P 5 GTP C 1 502 501 GTP GTP . 
Q 6 MG C 1 503 502 MG MG . 
R 7 CA C 1 504 504 CA CA . 
S 8 GDP D 1 501 501 GDP GDP . 
T 10 J6R D 1 502 2 J6R TGL . 
U 11 ACP F 1 401 401 ACP ACP . 
V 12 HOH A 1 601 1006 HOH HOH . 
V 12 HOH A 2 602 1025 HOH HOH . 
V 12 HOH A 3 603 1009 HOH HOH . 
V 12 HOH A 4 604 1007 HOH HOH . 
V 12 HOH A 5 605 1022 HOH HOH . 
V 12 HOH A 6 606 1012 HOH HOH . 
V 12 HOH A 7 607 1005 HOH HOH . 
V 12 HOH A 8 608 1034 HOH HOH . 
V 12 HOH A 9 609 1148 HOH HOH . 
V 12 HOH A 10 610 1008 HOH HOH . 
V 12 HOH A 11 611 1011 HOH HOH . 
V 12 HOH A 12 612 1042 HOH HOH . 
V 12 HOH A 13 613 1039 HOH HOH . 
V 12 HOH A 14 614 1023 HOH HOH . 
V 12 HOH A 15 615 1033 HOH HOH . 
V 12 HOH A 16 616 1035 HOH HOH . 
V 12 HOH A 17 617 1015 HOH HOH . 
V 12 HOH A 18 618 1043 HOH HOH . 
V 12 HOH A 19 619 1036 HOH HOH . 
V 12 HOH A 20 620 1150 HOH HOH . 
V 12 HOH A 21 621 1149 HOH HOH . 
V 12 HOH A 22 622 1046 HOH HOH . 
V 12 HOH A 23 623 1027 HOH HOH . 
V 12 HOH A 24 624 1010 HOH HOH . 
V 12 HOH A 25 625 1013 HOH HOH . 
V 12 HOH A 26 626 1032 HOH HOH . 
V 12 HOH A 27 627 1024 HOH HOH . 
V 12 HOH A 28 628 1017 HOH HOH . 
V 12 HOH A 29 629 1021 HOH HOH . 
V 12 HOH A 30 630 1020 HOH HOH . 
V 12 HOH A 31 631 1019 HOH HOH . 
V 12 HOH A 32 632 1160 HOH HOH . 
V 12 HOH A 33 633 1018 HOH HOH . 
V 12 HOH A 34 634 1044 HOH HOH . 
V 12 HOH A 35 635 1031 HOH HOH . 
V 12 HOH A 36 636 1014 HOH HOH . 
V 12 HOH A 37 637 1037 HOH HOH . 
V 12 HOH A 38 638 1026 HOH HOH . 
V 12 HOH A 39 639 1029 HOH HOH . 
W 12 HOH B 1 601 1055 HOH HOH . 
W 12 HOH B 2 602 1119 HOH HOH . 
W 12 HOH B 3 603 1162 HOH HOH . 
W 12 HOH B 4 604 1067 HOH HOH . 
W 12 HOH B 5 605 1028 HOH HOH . 
W 12 HOH B 6 606 1129 HOH HOH . 
W 12 HOH B 7 607 1058 HOH HOH . 
W 12 HOH B 8 608 1124 HOH HOH . 
W 12 HOH B 9 609 1050 HOH HOH . 
W 12 HOH B 10 610 1128 HOH HOH . 
W 12 HOH B 11 611 1072 HOH HOH . 
W 12 HOH B 12 612 1151 HOH HOH . 
W 12 HOH B 13 613 1064 HOH HOH . 
W 12 HOH B 14 614 1063 HOH HOH . 
W 12 HOH B 15 615 1122 HOH HOH . 
W 12 HOH B 16 616 1047 HOH HOH . 
W 12 HOH B 17 617 1155 HOH HOH . 
W 12 HOH B 18 618 1161 HOH HOH . 
W 12 HOH B 19 619 1065 HOH HOH . 
W 12 HOH B 20 620 1016 HOH HOH . 
W 12 HOH B 21 621 1048 HOH HOH . 
W 12 HOH B 22 622 1049 HOH HOH . 
W 12 HOH B 23 623 1068 HOH HOH . 
W 12 HOH B 24 624 1062 HOH HOH . 
W 12 HOH B 25 625 1081 HOH HOH . 
W 12 HOH B 26 626 1045 HOH HOH . 
W 12 HOH B 27 627 1076 HOH HOH . 
W 12 HOH B 28 628 1056 HOH HOH . 
W 12 HOH B 29 629 1123 HOH HOH . 
W 12 HOH B 30 630 1057 HOH HOH . 
W 12 HOH B 31 631 1060 HOH HOH . 
W 12 HOH B 32 632 1053 HOH HOH . 
W 12 HOH B 33 633 1080 HOH HOH . 
W 12 HOH B 34 634 1075 HOH HOH . 
W 12 HOH B 35 635 1059 HOH HOH . 
W 12 HOH B 36 636 1073 HOH HOH . 
W 12 HOH B 37 637 1135 HOH HOH . 
W 12 HOH B 38 638 1061 HOH HOH . 
W 12 HOH B 39 639 1130 HOH HOH . 
W 12 HOH B 40 640 1079 HOH HOH . 
W 12 HOH B 41 641 1117 HOH HOH . 
W 12 HOH B 42 642 1077 HOH HOH . 
W 12 HOH B 43 643 1054 HOH HOH . 
W 12 HOH B 44 644 1078 HOH HOH . 
W 12 HOH B 45 645 1030 HOH HOH . 
X 12 HOH C 1 601 1134 HOH HOH . 
X 12 HOH C 2 602 1069 HOH HOH . 
X 12 HOH C 3 603 1093 HOH HOH . 
X 12 HOH C 4 604 1138 HOH HOH . 
X 12 HOH C 5 605 1085 HOH HOH . 
X 12 HOH C 6 606 1132 HOH HOH . 
X 12 HOH C 7 607 1133 HOH HOH . 
X 12 HOH C 8 608 1098 HOH HOH . 
X 12 HOH C 9 609 1144 HOH HOH . 
X 12 HOH C 10 610 1146 HOH HOH . 
X 12 HOH C 11 611 1088 HOH HOH . 
X 12 HOH C 12 612 1156 HOH HOH . 
X 12 HOH C 13 613 1086 HOH HOH . 
X 12 HOH C 14 614 1004 HOH HOH . 
X 12 HOH C 15 615 1141 HOH HOH . 
X 12 HOH C 16 616 1082 HOH HOH . 
X 12 HOH C 17 617 1136 HOH HOH . 
X 12 HOH C 18 618 1094 HOH HOH . 
X 12 HOH C 19 619 1131 HOH HOH . 
X 12 HOH C 20 620 1089 HOH HOH . 
X 12 HOH C 21 621 1095 HOH HOH . 
X 12 HOH C 22 622 1051 HOH HOH . 
X 12 HOH C 23 623 1002 HOH HOH . 
X 12 HOH C 24 624 1147 HOH HOH . 
X 12 HOH C 25 625 1052 HOH HOH . 
X 12 HOH C 26 626 1125 HOH HOH . 
X 12 HOH C 27 627 1003 HOH HOH . 
X 12 HOH C 28 628 1083 HOH HOH . 
X 12 HOH C 29 629 1084 HOH HOH . 
X 12 HOH C 30 630 1087 HOH HOH . 
X 12 HOH C 31 631 1143 HOH HOH . 
X 12 HOH C 32 632 1099 HOH HOH . 
X 12 HOH C 33 633 1097 HOH HOH . 
X 12 HOH C 34 634 1001 HOH HOH . 
X 12 HOH C 35 635 1090 HOH HOH . 
X 12 HOH C 36 636 1139 HOH HOH . 
X 12 HOH C 37 637 1118 HOH HOH . 
X 12 HOH C 38 638 1126 HOH HOH . 
X 12 HOH C 39 639 1137 HOH HOH . 
X 12 HOH C 40 640 1158 HOH HOH . 
X 12 HOH C 41 641 1091 HOH HOH . 
X 12 HOH C 42 642 1100 HOH HOH . 
X 12 HOH C 43 643 1142 HOH HOH . 
X 12 HOH C 44 644 1127 HOH HOH . 
X 12 HOH C 45 645 1071 HOH HOH . 
X 12 HOH C 46 646 1140 HOH HOH . 
X 12 HOH C 47 647 1107 HOH HOH . 
X 12 HOH C 48 648 1070 HOH HOH . 
X 12 HOH C 49 649 1096 HOH HOH . 
X 12 HOH C 50 650 1121 HOH HOH . 
Y 12 HOH D 1 1101 1101 HOH HOH . 
Y 12 HOH D 2 1102 1154 HOH HOH . 
Y 12 HOH D 3 1103 1106 HOH HOH . 
Y 12 HOH D 4 1104 1108 HOH HOH . 
Y 12 HOH D 5 1105 1103 HOH HOH . 
Y 12 HOH D 6 1106 1092 HOH HOH . 
Y 12 HOH D 7 1107 1105 HOH HOH . 
Y 12 HOH D 8 1108 1102 HOH HOH . 
Y 12 HOH D 9 1109 1153 HOH HOH . 
Y 12 HOH D 10 1110 1145 HOH HOH . 
Y 12 HOH D 11 1111 1109 HOH HOH . 
Y 12 HOH D 12 1112 1110 HOH HOH . 
Y 12 HOH D 13 1113 1152 HOH HOH . 
Y 12 HOH D 14 1114 1104 HOH HOH . 
Y 12 HOH D 15 1115 1112 HOH HOH . 
Z 12 HOH E 1 201 1074 HOH HOH . 
Z 12 HOH E 2 202 1041 HOH HOH . 
AA 12 HOH F 1 501 1113 HOH HOH . 
AA 12 HOH F 2 502 1159 HOH HOH . 
AA 12 HOH F 3 503 1038 HOH HOH . 
AA 12 HOH F 4 504 1040 HOH HOH . 
AA 12 HOH F 5 505 1157 HOH HOH . 
AA 12 HOH F 6 506 1114 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               130.239 
_atom_site.Cartn_y               75.49 
_atom_site.Cartn_z               232.662 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.62 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#