data_7ENT # _model_server_result.job_id 0Oog8AWJwO1Zonex6R4c4w _model_server_result.datetime_utc '2024-11-29 00:26:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ent # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7ENT # _exptl.entry_id 7ENT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7ENT _cell.length_a 61.46 _cell.length_b 61.46 _cell.length_c 334.599 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ENT _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_775 -y+2,-x+2,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 61.46 106.451843 55.7665 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O2G ATP . A ATP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc2 B O2B ATP . A ATP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc3 B O2A ATP . A ATP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc4 C MG MG . A MG 402 1_555 E O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc5 C MG MG . A MG 402 1_555 E O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ENT _atom_sites.fract_transf_matrix[1][1] 0.016271 _atom_sites.fract_transf_matrix[1][2] 0.009394 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002989 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 401 4 ATP ATP . C 3 MG A 1 402 1 MG MG . D 4 J9L A 1 403 1 J9L Y31 . E 5 HOH A 1 501 52 HOH HOH . E 5 HOH A 2 502 59 HOH HOH . E 5 HOH A 3 503 54 HOH HOH . E 5 HOH A 4 504 23 HOH HOH . E 5 HOH A 5 505 27 HOH HOH . E 5 HOH A 6 506 5 HOH HOH . E 5 HOH A 7 507 43 HOH HOH . E 5 HOH A 8 508 3 HOH HOH . E 5 HOH A 9 509 36 HOH HOH . E 5 HOH A 10 510 21 HOH HOH . E 5 HOH A 11 511 48 HOH HOH . E 5 HOH A 12 512 19 HOH HOH . E 5 HOH A 13 513 30 HOH HOH . E 5 HOH A 14 514 20 HOH HOH . E 5 HOH A 15 515 2 HOH HOH . E 5 HOH A 16 516 14 HOH HOH . E 5 HOH A 17 517 28 HOH HOH . E 5 HOH A 18 518 6 HOH HOH . E 5 HOH A 19 519 66 HOH HOH . E 5 HOH A 20 520 4 HOH HOH . E 5 HOH A 21 521 56 HOH HOH . E 5 HOH A 22 522 15 HOH HOH . E 5 HOH A 23 523 69 HOH HOH . E 5 HOH A 24 524 7 HOH HOH . E 5 HOH A 25 525 26 HOH HOH . E 5 HOH A 26 526 1 HOH HOH . E 5 HOH A 27 527 10 HOH HOH . E 5 HOH A 28 528 25 HOH HOH . E 5 HOH A 29 529 35 HOH HOH . E 5 HOH A 30 530 34 HOH HOH . E 5 HOH A 31 531 60 HOH HOH . E 5 HOH A 32 532 8 HOH HOH . E 5 HOH A 33 533 67 HOH HOH . E 5 HOH A 34 534 12 HOH HOH . E 5 HOH A 35 535 44 HOH HOH . E 5 HOH A 36 536 16 HOH HOH . E 5 HOH A 37 537 49 HOH HOH . E 5 HOH A 38 538 53 HOH HOH . E 5 HOH A 39 539 51 HOH HOH . E 5 HOH A 40 540 45 HOH HOH . E 5 HOH A 41 541 22 HOH HOH . E 5 HOH A 42 542 24 HOH HOH . E 5 HOH A 43 543 46 HOH HOH . E 5 HOH A 44 544 38 HOH HOH . E 5 HOH A 45 545 64 HOH HOH . E 5 HOH A 46 546 47 HOH HOH . E 5 HOH A 47 547 42 HOH HOH . E 5 HOH A 48 548 17 HOH HOH . E 5 HOH A 49 549 55 HOH HOH . E 5 HOH A 50 550 18 HOH HOH . E 5 HOH A 51 551 57 HOH HOH . E 5 HOH A 52 552 41 HOH HOH . E 5 HOH A 53 553 9 HOH HOH . E 5 HOH A 54 554 13 HOH HOH . E 5 HOH A 55 555 71 HOH HOH . E 5 HOH A 56 556 29 HOH HOH . E 5 HOH A 57 557 31 HOH HOH . E 5 HOH A 58 558 11 HOH HOH . E 5 HOH A 59 559 68 HOH HOH . E 5 HOH A 60 560 61 HOH HOH . E 5 HOH A 61 561 40 HOH HOH . E 5 HOH A 62 562 62 HOH HOH . E 5 HOH A 63 563 33 HOH HOH . E 5 HOH A 64 564 58 HOH HOH . E 5 HOH A 65 565 70 HOH HOH . E 5 HOH A 66 566 65 HOH HOH . E 5 HOH A 67 567 37 HOH HOH . E 5 HOH A 68 568 50 HOH HOH . E 5 HOH A 69 569 39 HOH HOH . E 5 HOH A 70 570 32 HOH HOH . E 5 HOH A 71 571 63 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.744 _atom_site.Cartn_y 47.952 _atom_site.Cartn_z 17.102 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #