data_7EOT
#
_model_server_result.job_id            LyS4d_EugU3XxrtleqwIDw 
_model_server_result.datetime_utc      '2024-11-12 21:24:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7eot 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":905}' 
#
_entry.id    7EOT 
#
_exptl.entry_id    7EOT 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7EOT 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EOT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 87 A CYS 87 1_555 A SG CYS 320 A CYS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 429 A CYS 429 1_555 A SG CYS 455 A CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 A SG CYS 436 A CYS 436 1_555 A SG CYS 456 A CYS 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 A SG CYS 745 A CYS 745 1_555 A SG CYS 800 A CYS 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 A SG CYS 794 A CYS 794 1_555 D SG CYS 698 D CYS 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 B SG CYS 79 B CYS 79 1_555 B SG CYS 308 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 B SG CYS 420 B CYS 420 1_555 B SG CYS 454 B CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf8 B SG CYS 436 B CYS 436 1_555 B SG CYS 455 B CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 B SG CYS 698 B CYS 698 1_555 C SG CYS 794 C CYS 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 B SG CYS 744 B CYS 744 1_555 B SG CYS 798 B CYS 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf11 C SG CYS 87 C CYS 87 1_555 C SG CYS 320 C CYS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf12 C SG CYS 429 C CYS 429 1_555 C SG CYS 455 C CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf13 C SG CYS 436 C CYS 436 1_555 C SG CYS 456 C CYS 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf14 C SG CYS 745 C CYS 745 1_555 C SG CYS 800 C CYS 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf15 D SG CYS 79 D CYS 79 1_555 D SG CYS 308 D CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf16 D SG CYS 420 D CYS 420 1_555 D SG CYS 454 D CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf17 D SG CYS 436 D CYS 436 1_555 D SG CYS 455 D CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf18 D SG CYS 744 D CYS 744 1_555 D SG CYS 798 D CYS 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 687 A ASN 687 1_555 E C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale2 B ND2 ASN 61 B ASN 61 1_555 F C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale3 B ND2 ASN 203 B ASN 203 1_555 G C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale4 B ND2 ASN 239 B ASN 239 1_555 H C1 NAG . B NAG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale5 B ND2 ASN 276 B ASN 276 1_555 I C1 NAG . B NAG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale6 B ND2 ASN 368 B ASN 368 1_555 J C1 NAG . B NAG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale7 B ND2 ASN 471 B ASN 471 1_555 K C1 NAG . B NAG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale8 B ND2 ASN 771 B ASN 771 1_555 L C1 NAG . B NAG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale9 C ND2 ASN 687 C ASN 687 1_555 N C1 NAG . C NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale10 D ND2 ASN 61 D ASN 61 1_555 O C1 NAG . D NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale11 D ND2 ASN 203 D ASN 203 1_555 P C1 NAG . D NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale12 D ND2 ASN 239 D ASN 239 1_555 Q C1 NAG . D NAG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale13 D ND2 ASN 276 D ASN 276 1_555 R C1 NAG . D NAG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale14 D ND2 ASN 368 D ASN 368 1_555 S C1 NAG . D NAG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale15 D ND2 ASN 471 D ASN 471 1_555 T C1 NAG . D NAG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale16 D ND2 ASN 771 D ASN 771 1_555 U C1 NAG . D NAG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 270 n n 
C1 O1 NAG sing 271 n n 
C1 O5 NAG sing 272 n n 
C1 H1 NAG sing 273 n n 
C2 C3 NAG sing 274 n n 
C2 N2 NAG sing 275 n n 
C2 H2 NAG sing 276 n n 
C3 C4 NAG sing 277 n n 
C3 O3 NAG sing 278 n n 
C3 H3 NAG sing 279 n n 
C4 C5 NAG sing 280 n n 
C4 O4 NAG sing 281 n n 
C4 H4 NAG sing 282 n n 
C5 C6 NAG sing 283 n n 
C5 O5 NAG sing 284 n n 
C5 H5 NAG sing 285 n n 
C6 O6 NAG sing 286 n n 
C6 H61 NAG sing 287 n n 
C6 H62 NAG sing 288 n n 
C7 C8 NAG sing 289 n n 
C7 N2 NAG sing 290 n n 
C7 O7 NAG doub 291 n n 
C8 H81 NAG sing 292 n n 
C8 H82 NAG sing 293 n n 
C8 H83 NAG sing 294 n n 
N2 HN2 NAG sing 295 n n 
O1 HO1 NAG sing 296 n n 
O3 HO3 NAG sing 297 n n 
O4 HO4 NAG sing 298 n n 
O6 HO6 NAG sing 299 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7EOT 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 901 838 NAG NAG . 
F 3 NAG B 1 901 845 NAG NAG . 
G 3 NAG B 1 902 846 NAG NAG . 
H 3 NAG B 1 903 847 NAG NAG . 
I 3 NAG B 1 904 848 NAG NAG . 
J 3 NAG B 1 905 849 NAG NAG . 
K 3 NAG B 1 906 850 NAG NAG . 
L 3 NAG B 1 907 851 NAG NAG . 
M 4 J86 B 1 908 1 J86 AB7 . 
N 3 NAG C 1 901 838 NAG NAG . 
O 3 NAG D 1 901 845 NAG NAG . 
P 3 NAG D 1 902 846 NAG NAG . 
Q 3 NAG D 1 903 847 NAG NAG . 
R 3 NAG D 1 904 848 NAG NAG . 
S 3 NAG D 1 905 849 NAG NAG . 
T 3 NAG D 1 906 850 NAG NAG . 
U 3 NAG D 1 907 851 NAG NAG . 
V 4 J86 D 1 908 1 J86 AB7 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . S 3 119.267 172.158 187.493 1 122.32 ? C1 NAG 905 D 1 
HETATM 2 C C2 NAG . . . S 3 118.496 171.529 188.653 1 122.32 ? C2 NAG 905 D 1 
HETATM 3 C C3 NAG . . . S 3 117.495 170.505 188.125 1 122.32 ? C3 NAG 905 D 1 
HETATM 4 C C4 NAG . . . S 3 116.601 171.133 187.064 1 122.32 ? C4 NAG 905 D 1 
HETATM 5 C C5 NAG . . . S 3 117.446 171.791 185.976 1 122.32 ? C5 NAG 905 D 1 
HETATM 6 C C6 NAG . . . S 3 116.62 172.541 184.958 1 122.32 ? C6 NAG 905 D 1 
HETATM 7 C C7 NAG . . . S 3 119.751 171.493 190.764 1 122.32 ? C7 NAG 905 D 1 
HETATM 8 C C8 NAG . . . S 3 120.691 170.711 191.632 1 122.32 ? C8 NAG 905 D 1 
HETATM 9 N N2 NAG . . . S 3 119.399 170.913 189.612 1 122.32 ? N2 NAG 905 D 1 
HETATM 10 O O3 NAG . . . S 3 116.703 170.016 189.201 1 122.32 ? O3 NAG 905 D 1 
HETATM 11 O O4 NAG . . . S 3 115.78 170.131 186.472 1 122.32 ? O4 NAG 905 D 1 
HETATM 12 O O5 NAG . . . S 3 118.346 172.743 186.564 1 122.32 ? O5 NAG 905 D 1 
HETATM 13 O O6 NAG . . . S 3 116.344 171.74 183.817 1 122.32 ? O6 NAG 905 D 1 
HETATM 14 O O7 NAG . . . S 3 119.331 172.598 191.091 1 122.32 ? O7 NAG 905 D 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#