data_7EOT # _model_server_result.job_id -WcY3nYVXIbdEmHvWGAr7Q _model_server_result.datetime_utc '2024-11-12 21:25:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7eot # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":908}' # _entry.id 7EOT # _exptl.entry_id 7EOT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 378.116 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1S)-1-[[7-bromanyl-2,3-bis(oxidanylidene)-1,4-dihydroquinoxalin-5-yl]methylamino]ethyl]phosphonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EOT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 87 A CYS 87 1_555 A SG CYS 320 A CYS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 429 A CYS 429 1_555 A SG CYS 455 A CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 436 A CYS 436 1_555 A SG CYS 456 A CYS 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 745 A CYS 745 1_555 A SG CYS 800 A CYS 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 794 A CYS 794 1_555 D SG CYS 698 D CYS 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 79 B CYS 79 1_555 B SG CYS 308 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 420 B CYS 420 1_555 B SG CYS 454 B CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 436 B CYS 436 1_555 B SG CYS 455 B CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 B SG CYS 698 B CYS 698 1_555 C SG CYS 794 C CYS 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 B SG CYS 744 B CYS 744 1_555 B SG CYS 798 B CYS 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 C SG CYS 87 C CYS 87 1_555 C SG CYS 320 C CYS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 C SG CYS 429 C CYS 429 1_555 C SG CYS 455 C CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf13 C SG CYS 436 C CYS 436 1_555 C SG CYS 456 C CYS 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf14 C SG CYS 745 C CYS 745 1_555 C SG CYS 800 C CYS 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf15 D SG CYS 79 D CYS 79 1_555 D SG CYS 308 D CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf16 D SG CYS 420 D CYS 420 1_555 D SG CYS 454 D CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf17 D SG CYS 436 D CYS 436 1_555 D SG CYS 455 D CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf18 D SG CYS 744 D CYS 744 1_555 D SG CYS 798 D CYS 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 687 A ASN 687 1_555 E C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 B ND2 ASN 61 B ASN 61 1_555 F C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale3 B ND2 ASN 203 B ASN 203 1_555 G C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale4 B ND2 ASN 239 B ASN 239 1_555 H C1 NAG . B NAG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale5 B ND2 ASN 276 B ASN 276 1_555 I C1 NAG . B NAG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale6 B ND2 ASN 368 B ASN 368 1_555 J C1 NAG . B NAG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale7 B ND2 ASN 471 B ASN 471 1_555 K C1 NAG . B NAG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale8 B ND2 ASN 771 B ASN 771 1_555 L C1 NAG . B NAG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale9 C ND2 ASN 687 C ASN 687 1_555 N C1 NAG . C NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale10 D ND2 ASN 61 D ASN 61 1_555 O C1 NAG . D NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale11 D ND2 ASN 203 D ASN 203 1_555 P C1 NAG . D NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale12 D ND2 ASN 239 D ASN 239 1_555 Q C1 NAG . D NAG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale13 D ND2 ASN 276 D ASN 276 1_555 R C1 NAG . D NAG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale14 D ND2 ASN 368 D ASN 368 1_555 S C1 NAG . D NAG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale15 D ND2 ASN 471 D ASN 471 1_555 T C1 NAG . D NAG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale16 D ND2 ASN 771 D ASN 771 1_555 U C1 NAG . D NAG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C11 H13 Br N3 O5 P' _chem_comp.formula_weight 378.116 _chem_comp.id J86 _chem_comp.mon_nstd_flag . _chem_comp.name '[(1S)-1-[[7-bromanyl-2,3-bis(oxidanylidene)-1,4-dihydroquinoxalin-5-yl]methylamino]ethyl]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C9 J86 sing 171 n n C9 C7 J86 doub 172 n y C9 C8 J86 sing 173 n y C7 C3 J86 sing 174 n y O3 P1 J86 doub 175 n n C8 C5 J86 doub 176 n y C3 C2 J86 sing 177 n n C3 C4 J86 doub 178 n y P1 O2 J86 sing 179 n n P1 C1 J86 sing 180 n n P1 O1 J86 sing 181 n n N1 C2 J86 sing 182 n n N1 C1 J86 sing 183 n n C1 C6 J86 sing 184 n n C5 C4 J86 sing 185 n y C5 N3 J86 sing 186 n n C4 N2 J86 sing 187 n n N3 C11 J86 sing 188 n n N2 C10 J86 sing 189 n n C11 C10 J86 sing 190 n n C11 O5 J86 doub 191 n n C10 O4 J86 doub 192 n n C1 H1 J86 sing 193 n n N1 H12 J86 sing 194 n n O1 H13 J86 sing 195 n n C2 H3 J86 sing 196 n n C2 H2 J86 sing 197 n n N2 H9 J86 sing 198 n n O2 H14 J86 sing 199 n n N3 H11 J86 sing 200 n n C6 H6 J86 sing 201 n n C6 H7 J86 sing 202 n n C6 H5 J86 sing 203 n n C7 H8 J86 sing 204 n n C8 H10 J86 sing 205 n n # _atom_sites.entry_id 7EOT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NAG A 1 901 838 NAG NAG . F 3 NAG B 1 901 845 NAG NAG . G 3 NAG B 1 902 846 NAG NAG . H 3 NAG B 1 903 847 NAG NAG . I 3 NAG B 1 904 848 NAG NAG . J 3 NAG B 1 905 849 NAG NAG . K 3 NAG B 1 906 850 NAG NAG . L 3 NAG B 1 907 851 NAG NAG . M 4 J86 B 1 908 1 J86 AB7 . N 3 NAG C 1 901 838 NAG NAG . O 3 NAG D 1 901 845 NAG NAG . P 3 NAG D 1 902 846 NAG NAG . Q 3 NAG D 1 903 847 NAG NAG . R 3 NAG D 1 904 848 NAG NAG . S 3 NAG D 1 905 849 NAG NAG . T 3 NAG D 1 906 850 NAG NAG . U 3 NAG D 1 907 851 NAG NAG . V 4 J86 D 1 908 1 J86 AB7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 J86 . . . V 4 145.758 167.42 132.725 1 20 ? P1 J86 908 D 1 HETATM 2 C C1 J86 . . . V 4 144.298 166.393 132.939 1 20 ? C1 J86 908 D 1 HETATM 3 N N1 J86 . . . V 4 143.239 167.402 132.845 1 20 ? N1 J86 908 D 1 HETATM 4 O O1 J86 . . . V 4 145.836 168.311 134.073 1 20 ? O1 J86 908 D 1 HETATM 5 C C2 J86 . . . V 4 141.914 166.84 132.851 1 20 ? C2 J86 908 D 1 HETATM 6 N N2 J86 . . . V 4 140.69 168.208 135.085 1 20 ? N2 J86 908 D 1 HETATM 7 O O2 J86 . . . V 4 146.98 166.373 132.909 1 20 ? O2 J86 908 D 1 HETATM 8 C C3 J86 . . . V 4 140.856 167.882 132.69 1 20 ? C3 J86 908 D 1 HETATM 9 N N3 J86 . . . V 4 138.733 170.135 134.701 1 20 ? N3 J86 908 D 1 HETATM 10 O O3 J86 . . . V 4 145.803 168.2 131.443 1 20 ? O3 J86 908 D 1 HETATM 11 C C4 J86 . . . V 4 140.282 168.529 133.787 1 20 ? C4 J86 908 D 1 HETATM 12 O O4 J86 . . . V 4 140.496 168.555 137.362 1 20 ? O4 J86 908 D 1 HETATM 13 C C5 J86 . . . V 4 139.299 169.495 133.593 1 20 ? C5 J86 908 D 1 HETATM 14 O O5 J86 . . . V 4 138.626 170.394 136.995 1 20 ? O5 J86 908 D 1 HETATM 15 C C6 J86 . . . V 4 144.27 165.608 134.242 1 20 ? C6 J86 908 D 1 HETATM 16 C C7 J86 . . . V 4 140.438 168.209 131.401 1 20 ? C7 J86 908 D 1 HETATM 17 C C8 J86 . . . V 4 138.88 169.825 132.304 1 20 ? C8 J86 908 D 1 HETATM 18 C C9 J86 . . . V 4 139.452 169.18 131.207 1 20 ? C9 J86 908 D 1 HETATM 19 C C10 J86 . . . V 4 140.164 168.807 136.209 1 20 ? C10 J86 908 D 1 HETATM 20 C C11 J86 . . . V 4 139.098 169.857 136.001 1 20 ? C11 J86 908 D 1 HETATM 21 BR BR1 J86 . . . V 4 138.888 169.616 129.456 1 20 ? BR1 J86 908 D 1 HETATM 22 H H1 J86 . . . V 4 144.215 165.703 132.1 1 20 ? H1 J86 908 D 1 HETATM 23 H H12 J86 . . . V 4 143.368 167.947 132.009 1 20 ? H12 J86 908 D 1 HETATM 24 H H3 J86 . . . V 4 141.831 166.123 132.034 1 20 ? H3 J86 908 D 1 HETATM 25 H H2 J86 . . . V 4 141.756 166.32 133.793 1 20 ? H2 J86 908 D 1 HETATM 26 H H9 J86 . . . V 4 141.399 167.508 135.204 1 20 ? H9 J86 908 D 1 HETATM 27 H H11 J86 . . . V 4 138.025 170.832 134.541 1 20 ? H11 J86 908 D 1 HETATM 28 H H6 J86 . . . V 4 143.445 164.898 134.22 1 20 ? H6 J86 908 D 1 HETATM 29 H H7 J86 . . . V 4 145.209 165.07 134.362 1 20 ? H7 J86 908 D 1 HETATM 30 H H5 J86 . . . V 4 144.136 166.294 135.076 1 20 ? H5 J86 908 D 1 HETATM 31 H H8 J86 . . . V 4 140.882 167.708 130.544 1 20 ? H8 J86 908 D 1 HETATM 32 H H10 J86 . . . V 4 138.112 170.581 132.155 1 20 ? H10 J86 908 D 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 32 #