data_7EPM # _model_server_result.job_id 0Xc62ZlGRDZR7OlXFWq9-A _model_server_result.datetime_utc '2024-11-23 00:23:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7epm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 7EPM # _exptl.entry_id 7EPM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 117.103 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(ethylamino)-2-oxidanylidene-ethanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7EPM _cell.length_a 177.891 _cell.length_b 177.891 _cell.length_c 179.21 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EPM _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -29.868333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _chem_comp.formula 'C4 H7 N O3' _chem_comp.formula_weight 117.103 _chem_comp.id J9X _chem_comp.mon_nstd_flag . _chem_comp.name '2-(ethylamino)-2-oxidanylidene-ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O06 C05 J9X doub 173 n n C05 C03 J9X sing 174 n n C05 O07 J9X sing 175 n n C08 C01 J9X sing 176 n n C03 N02 J9X sing 177 n n C03 O04 J9X doub 178 n n N02 C01 J9X sing 179 n n C01 H1 J9X sing 180 n n C01 H2 J9X sing 181 n n C08 H3 J9X sing 182 n n C08 H4 J9X sing 183 n n C08 H5 J9X sing 184 n n N02 H6 J9X sing 185 n n O07 H7 J9X sing 186 n n # _atom_sites.entry_id 7EPM _atom_sites.fract_transf_matrix[1][1] 0.005621 _atom_sites.fract_transf_matrix[1][2] 0.003246 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00558 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 J9X A 1 401 1002 J9X EAA . D 3 NAD A 1 402 1001 NAD NAD . E 4 SO4 A 1 403 9 SO4 SO4 . F 4 SO4 A 1 404 10 SO4 SO4 . G 4 SO4 A 1 405 11 SO4 SO4 . H 2 J9X B 1 401 1002 J9X EAA . I 3 NAD B 1 402 1001 NAD NAD . J 4 SO4 B 1 403 1 SO4 SO4 . K 4 SO4 B 1 404 2 SO4 SO4 . L 4 SO4 B 1 405 5 SO4 SO4 . M 4 SO4 B 1 406 7 SO4 SO4 . N 4 SO4 B 1 407 8 SO4 SO4 . O 4 SO4 B 1 408 12 SO4 SO4 . P 5 HOH A 1 501 6 HOH HOH . P 5 HOH A 2 502 3 HOH HOH . P 5 HOH A 3 503 13 HOH HOH . P 5 HOH A 4 504 11 HOH HOH . P 5 HOH A 5 505 10 HOH HOH . P 5 HOH A 6 506 1 HOH HOH . P 5 HOH A 7 507 5 HOH HOH . P 5 HOH A 8 508 4 HOH HOH . P 5 HOH A 9 509 15 HOH HOH . P 5 HOH A 10 510 16 HOH HOH . P 5 HOH A 11 511 9 HOH HOH . P 5 HOH A 12 512 7 HOH HOH . P 5 HOH A 13 513 25 HOH HOH . P 5 HOH A 14 514 12 HOH HOH . P 5 HOH A 15 515 8 HOH HOH . Q 5 HOH B 1 501 17 HOH HOH . Q 5 HOH B 2 502 21 HOH HOH . Q 5 HOH B 3 503 23 HOH HOH . Q 5 HOH B 4 504 22 HOH HOH . Q 5 HOH B 5 505 18 HOH HOH . Q 5 HOH B 6 506 2 HOH HOH . Q 5 HOH B 7 507 14 HOH HOH . Q 5 HOH B 8 508 20 HOH HOH . Q 5 HOH B 9 509 19 HOH HOH . Q 5 HOH B 10 510 26 HOH HOH . Q 5 HOH B 11 511 27 HOH HOH . Q 5 HOH B 12 512 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 J9X . . . H 2 -29.07 31.926 -5.382 1 57.06 ? C01 J9X 401 B 1 HETATM 2 C C03 J9X . . . H 2 -31.185 32.239 -4.198 1 53.76 ? C03 J9X 401 B 1 HETATM 3 C C05 J9X . . . H 2 -32.758 32.263 -4.252 1 52.9 ? C05 J9X 401 B 1 HETATM 4 C C08 J9X . . . H 2 -28.714 31.273 -6.614 1 61.05 ? C08 J9X 401 B 1 HETATM 5 N N02 J9X . . . H 2 -30.477 32.011 -5.326 1 54.93 ? N02 J9X 401 B 1 HETATM 6 O O04 J9X . . . H 2 -30.543 32.402 -3.141 1 58.88 ? O04 J9X 401 B 1 HETATM 7 O O06 J9X . . . H 2 -33.287 31.386 -4.984 1 48.15 -1 O06 J9X 401 B 1 HETATM 8 O O07 J9X . . . H 2 -33.31 33.111 -3.548 1 53.07 ? O07 J9X 401 B 1 HETATM 9 H H1 J9X . . . H 2 -28.58 32.931 -5.319 1 70.56 ? H1 J9X 401 B 1 HETATM 10 H H2 J9X . . . H 2 -28.641 31.371 -4.509 1 70.56 ? H2 J9X 401 B 1 HETATM 11 H H3 J9X . . . H 2 -27.875 30.583 -6.452 1 75.35 ? H3 J9X 401 B 1 HETATM 12 H H4 J9X . . . H 2 -28.417 32.013 -7.368 1 75.35 ? H4 J9X 401 B 1 HETATM 13 H H5 J9X . . . H 2 -29.566 30.7 -7.003 1 75.35 ? H5 J9X 401 B 1 HETATM 14 H H6 J9X . . . H 2 -30.979 31.891 -6.201 1 68 ? H6 J9X 401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #