data_7EPW # _model_server_result.job_id aRiDUtaEu1jbd_Cn46EIMQ _model_server_result.datetime_utc '2025-07-27 07:08:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7epw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7EPW # _exptl.entry_id 7EPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 787.566 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7EPW _cell.length_a 97.4 _cell.length_b 97.4 _cell.length_c 168.98 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H35 N9 O15 P2' _chem_comp.formula_weight 787.566 _chem_comp.id FDA _chem_comp.mon_nstd_flag . _chem_comp.name 'DIHYDROFLAVINE-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FDA doub 83 n n PA O2A FDA sing 84 n n PA O5B FDA sing 85 n n PA O3P FDA sing 86 n n O2A HOA2 FDA sing 87 n n O5B C5B FDA sing 88 n n C5B C4B FDA sing 89 n n C5B H51A FDA sing 90 n n C5B H52A FDA sing 91 n n C4B O4B FDA sing 92 n n C4B C3B FDA sing 93 n n C4B H4B FDA sing 94 n n O4B C1B FDA sing 95 n n C3B O3B FDA sing 96 n n C3B C2B FDA sing 97 n n C3B H3B FDA sing 98 n n O3B HO3A FDA sing 99 n n C2B O2B FDA sing 100 n n C2B C1B FDA sing 101 n n C2B H2B FDA sing 102 n n O2B HO2A FDA sing 103 n n C1B N9A FDA sing 104 n n C1B H1B FDA sing 105 n n N9A C8A FDA sing 106 n y N9A C4A FDA sing 107 n y C8A N7A FDA doub 108 n y C8A H8A FDA sing 109 n n N7A C5A FDA sing 110 n y C5A C6A FDA sing 111 n y C5A C4A FDA doub 112 n y C6A N6A FDA sing 113 n n C6A N1A FDA doub 114 n y N6A H61A FDA sing 115 n n N6A H62A FDA sing 116 n n N1A C2A FDA sing 117 n y C2A N3A FDA doub 118 n y C2A H2A FDA sing 119 n n N3A C4A FDA sing 120 n y N1 C2 FDA sing 121 n n N1 C10 FDA sing 122 n n N1 HN1 FDA sing 123 n n C2 O2 FDA doub 124 n n C2 N3 FDA sing 125 n n N3 C4 FDA sing 126 n n N3 HN3 FDA sing 127 n n C4 O4 FDA doub 128 n n C4 C4X FDA sing 129 n n C4X N5 FDA sing 130 n n C4X C10 FDA doub 131 n n N5 C5X FDA sing 132 n n N5 HN5 FDA sing 133 n n C5X C6 FDA doub 134 n y C5X C9A FDA sing 135 n y C6 C7 FDA sing 136 n y C6 H6 FDA sing 137 n n C7 C7M FDA sing 138 n n C7 C8 FDA doub 139 n y C7M HM71 FDA sing 140 n n C7M HM72 FDA sing 141 n n C7M HM73 FDA sing 142 n n C8 C8M FDA sing 143 n n C8 C9 FDA sing 144 n y C8M HM81 FDA sing 145 n n C8M HM82 FDA sing 146 n n C8M HM83 FDA sing 147 n n C9 C9A FDA doub 148 n y C9 H9 FDA sing 149 n n C9A N10 FDA sing 150 n n N10 C10 FDA sing 151 n n N10 C1' FDA sing 152 n n C1' C2' FDA sing 153 n n C1' "H1'1" FDA sing 154 n n C1' "H1'2" FDA sing 155 n n C2' O2' FDA sing 156 n n C2' C3' FDA sing 157 n n C2' H2' FDA sing 158 n n O2' HO2' FDA sing 159 n n C3' O3' FDA sing 160 n n C3' C4' FDA sing 161 n n C3' H3' FDA sing 162 n n O3' HO3' FDA sing 163 n n C4' O4' FDA sing 164 n n C4' C5' FDA sing 165 n n C4' H4' FDA sing 166 n n O4' HO4' FDA sing 167 n n C5' O5' FDA sing 168 n n C5' "H5'1" FDA sing 169 n n C5' "H5'2" FDA sing 170 n n O5' P FDA sing 171 n n P O1P FDA doub 172 n n P O2P FDA sing 173 n n P O3P FDA sing 174 n n O2P HOP2 FDA sing 175 n n # _atom_sites.entry_id 7EPW _atom_sites.fract_transf_matrix[1][1] 0.010267 _atom_sites.fract_transf_matrix[1][2] 0.005928 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FDA A 1 401 401 FDA FAD . C 3 T1C A 1 402 402 T1C T1C . D 4 HOH A 1 501 68 HOH HOH . D 4 HOH A 2 502 32 HOH HOH . D 4 HOH A 3 503 60 HOH HOH . D 4 HOH A 4 504 6 HOH HOH . D 4 HOH A 5 505 27 HOH HOH . D 4 HOH A 6 506 18 HOH HOH . D 4 HOH A 7 507 1 HOH HOH . D 4 HOH A 8 508 48 HOH HOH . D 4 HOH A 9 509 30 HOH HOH . D 4 HOH A 10 510 3 HOH HOH . D 4 HOH A 11 511 57 HOH HOH . D 4 HOH A 12 512 19 HOH HOH . D 4 HOH A 13 513 69 HOH HOH . D 4 HOH A 14 514 5 HOH HOH . D 4 HOH A 15 515 9 HOH HOH . D 4 HOH A 16 516 7 HOH HOH . D 4 HOH A 17 517 14 HOH HOH . D 4 HOH A 18 518 46 HOH HOH . D 4 HOH A 19 519 75 HOH HOH . D 4 HOH A 20 520 21 HOH HOH . D 4 HOH A 21 521 8 HOH HOH . D 4 HOH A 22 522 11 HOH HOH . D 4 HOH A 23 523 20 HOH HOH . D 4 HOH A 24 524 36 HOH HOH . D 4 HOH A 25 525 56 HOH HOH . D 4 HOH A 26 526 42 HOH HOH . D 4 HOH A 27 527 66 HOH HOH . D 4 HOH A 28 528 2 HOH HOH . D 4 HOH A 29 529 76 HOH HOH . D 4 HOH A 30 530 44 HOH HOH . D 4 HOH A 31 531 47 HOH HOH . D 4 HOH A 32 532 41 HOH HOH . D 4 HOH A 33 533 58 HOH HOH . D 4 HOH A 34 534 63 HOH HOH . D 4 HOH A 35 535 52 HOH HOH . D 4 HOH A 36 536 50 HOH HOH . D 4 HOH A 37 537 40 HOH HOH . D 4 HOH A 38 538 24 HOH HOH . D 4 HOH A 39 539 74 HOH HOH . D 4 HOH A 40 540 22 HOH HOH . D 4 HOH A 41 541 23 HOH HOH . D 4 HOH A 42 542 35 HOH HOH . D 4 HOH A 43 543 31 HOH HOH . D 4 HOH A 44 544 45 HOH HOH . D 4 HOH A 45 545 12 HOH HOH . D 4 HOH A 46 546 59 HOH HOH . D 4 HOH A 47 547 4 HOH HOH . D 4 HOH A 48 548 39 HOH HOH . D 4 HOH A 49 549 15 HOH HOH . D 4 HOH A 50 550 61 HOH HOH . D 4 HOH A 51 551 10 HOH HOH . D 4 HOH A 52 552 29 HOH HOH . D 4 HOH A 53 553 13 HOH HOH . D 4 HOH A 54 554 28 HOH HOH . D 4 HOH A 55 555 33 HOH HOH . D 4 HOH A 56 556 67 HOH HOH . D 4 HOH A 57 557 71 HOH HOH . D 4 HOH A 58 558 54 HOH HOH . D 4 HOH A 59 559 73 HOH HOH . D 4 HOH A 60 560 38 HOH HOH . D 4 HOH A 61 561 37 HOH HOH . D 4 HOH A 62 562 16 HOH HOH . D 4 HOH A 63 563 53 HOH HOH . D 4 HOH A 64 564 65 HOH HOH . D 4 HOH A 65 565 17 HOH HOH . D 4 HOH A 66 566 34 HOH HOH . D 4 HOH A 67 567 64 HOH HOH . D 4 HOH A 68 568 55 HOH HOH . D 4 HOH A 69 569 26 HOH HOH . D 4 HOH A 70 570 77 HOH HOH . D 4 HOH A 71 571 25 HOH HOH . D 4 HOH A 72 572 70 HOH HOH . D 4 HOH A 73 573 49 HOH HOH . D 4 HOH A 74 574 62 HOH HOH . D 4 HOH A 75 575 51 HOH HOH . D 4 HOH A 76 576 43 HOH HOH . D 4 HOH A 77 577 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FDA . . . B 2 4.416 -30.211 -6.31 1 34.34 ? PA FDA 401 A 1 HETATM 2 O O1A FDA . . . B 2 4.319 -31.556 -5.664 1 30.84 ? O1A FDA 401 A 1 HETATM 3 O O2A FDA . . . B 2 5.678 -29.449 -6.237 1 28.67 ? O2A FDA 401 A 1 HETATM 4 O O5B FDA . . . B 2 3.906 -30.351 -7.819 1 33.12 ? O5B FDA 401 A 1 HETATM 5 C C5B FDA . . . B 2 4.204 -29.327 -8.794 1 31.05 ? C5B FDA 401 A 1 HETATM 6 C C4B FDA . . . B 2 4.117 -29.982 -10.142 1 30.47 ? C4B FDA 401 A 1 HETATM 7 O O4B FDA . . . B 2 4.231 -28.965 -11.155 1 28.79 ? O4B FDA 401 A 1 HETATM 8 C C3B FDA . . . B 2 5.194 -31.04 -10.458 1 28.59 ? C3B FDA 401 A 1 HETATM 9 O O3B FDA . . . B 2 4.543 -32.175 -11.029 1 27.33 ? O3B FDA 401 A 1 HETATM 10 C C2B FDA . . . B 2 6.1 -30.313 -11.468 1 28.69 ? C2B FDA 401 A 1 HETATM 11 O O2B FDA . . . B 2 6.641 -31.236 -12.377 1 29.82 ? O2B FDA 401 A 1 HETATM 12 C C1B FDA . . . B 2 5.1 -29.405 -12.182 1 31.66 ? C1B FDA 401 A 1 HETATM 13 N N9A FDA . . . B 2 5.65 -28.199 -12.83 1 29.92 ? N9A FDA 401 A 1 HETATM 14 C C8A FDA . . . B 2 6.606 -27.338 -12.299 1 33.51 ? C8A FDA 401 A 1 HETATM 15 N N7A FDA . . . B 2 6.836 -26.292 -13.062 1 30.03 ? N7A FDA 401 A 1 HETATM 16 C C5A FDA . . . B 2 5.977 -26.459 -14.136 1 31.84 ? C5A FDA 401 A 1 HETATM 17 C C6A FDA . . . B 2 5.749 -25.671 -15.276 1 32.22 ? C6A FDA 401 A 1 HETATM 18 N N6A FDA . . . B 2 6.366 -24.513 -15.51 1 28.08 ? N6A FDA 401 A 1 HETATM 19 N N1A FDA . . . B 2 4.796 -26.104 -16.133 1 32.26 ? N1A FDA 401 A 1 HETATM 20 C C2A FDA . . . B 2 4.151 -27.245 -15.862 1 31.45 ? C2A FDA 401 A 1 HETATM 21 N N3A FDA . . . B 2 4.321 -28.088 -14.846 1 32.18 ? N3A FDA 401 A 1 HETATM 22 C C4A FDA . . . B 2 5.244 -27.625 -14.001 1 27.72 ? C4A FDA 401 A 1 HETATM 23 N N1 FDA . . . B 2 4.159 -32.609 2.858 1 63.39 ? N1 FDA 401 A 1 HETATM 24 C C2 FDA . . . B 2 3.455 -33.435 3.656 1 66.99 ? C2 FDA 401 A 1 HETATM 25 O O2 FDA . . . B 2 2.239 -33.28 3.789 1 62.42 ? O2 FDA 401 A 1 HETATM 26 N N3 FDA . . . B 2 4.06 -34.493 4.312 1 68.52 ? N3 FDA 401 A 1 HETATM 27 C C4 FDA . . . B 2 5.418 -34.717 4.22 1 62.55 ? C4 FDA 401 A 1 HETATM 28 O O4 FDA . . . B 2 5.913 -35.651 4.817 1 66.63 ? O4 FDA 401 A 1 HETATM 29 C C4X FDA . . . B 2 6.193 -33.834 3.416 1 62.25 ? C4X FDA 401 A 1 HETATM 30 N N5 FDA . . . B 2 7.489 -34.009 3.321 1 56.21 ? N5 FDA 401 A 1 HETATM 31 C C5X FDA . . . B 2 8.204 -33.106 2.573 1 55.82 ? C5X FDA 401 A 1 HETATM 32 C C6 FDA . . . B 2 9.602 -33.249 2.492 1 54.35 ? C6 FDA 401 A 1 HETATM 33 C C7 FDA . . . B 2 10.387 -32.363 1.781 1 55.58 ? C7 FDA 401 A 1 HETATM 34 C C7M FDA . . . B 2 11.886 -32.539 1.724 1 58.8 ? C7M FDA 401 A 1 HETATM 35 C C8 FDA . . . B 2 9.772 -31.29 1.092 1 51.81 ? C8 FDA 401 A 1 HETATM 36 C C8M FDA . . . B 2 10.601 -30.326 0.279 1 51.71 ? C8M FDA 401 A 1 HETATM 37 C C9 FDA . . . B 2 8.394 -31.171 1.114 1 51.21 ? C9 FDA 401 A 1 HETATM 38 C C9A FDA . . . B 2 7.59 -32.049 1.867 1 55.8 ? C9A FDA 401 A 1 HETATM 39 N N10 FDA . . . B 2 6.205 -31.916 1.975 1 58.38 ? N10 FDA 401 A 1 HETATM 40 C C10 FDA . . . B 2 5.464 -32.785 2.752 1 63.39 ? C10 FDA 401 A 1 HETATM 41 C C1' FDA . . . B 2 5.483 -30.866 1.234 1 58.28 ? C1' FDA 401 A 1 HETATM 42 C C2' FDA . . . B 2 4.776 -31.48 0.018 1 48.81 ? C2' FDA 401 A 1 HETATM 43 O O2' FDA . . . B 2 5.703 -32.278 -0.716 1 48.93 ? O2' FDA 401 A 1 HETATM 44 C C3' FDA . . . B 2 4.169 -30.402 -0.876 1 40.78 ? C3' FDA 401 A 1 HETATM 45 O O3' FDA . . . B 2 3.284 -29.574 -0.119 1 37.98 ? O3' FDA 401 A 1 HETATM 46 C C4' FDA . . . B 2 3.368 -30.927 -2.065 1 38.81 ? C4' FDA 401 A 1 HETATM 47 O O4' FDA . . . B 2 4.223 -31.66 -2.953 1 36.12 ? O4' FDA 401 A 1 HETATM 48 C C5' FDA . . . B 2 2.749 -29.76 -2.811 1 36.36 ? C5' FDA 401 A 1 HETATM 49 O O5' FDA . . . B 2 2.003 -30.238 -3.922 1 34.75 ? O5' FDA 401 A 1 HETATM 50 P P FDA . . . B 2 1.853 -29.299 -5.192 1 30.48 ? P FDA 401 A 1 HETATM 51 O O1P FDA . . . B 2 1.066 -30.158 -6.148 1 26.07 ? O1P FDA 401 A 1 HETATM 52 O O2P FDA . . . B 2 1.405 -27.943 -4.763 1 27.5 ? O2P FDA 401 A 1 HETATM 53 O O3P FDA . . . B 2 3.345 -29.173 -5.712 1 29.68 ? O3P FDA 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 53 #