data_7EQU # _model_server_result.job_id SAmCHB6g1H3suWi-FjGu_Q _model_server_result.datetime_utc '2024-11-16 17:47:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7equ # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":701}' # _entry.id 7EQU # _exptl.entry_id 7EQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 129.949 _cell.angle_gamma 90 _cell.entry_id 7EQU _cell.length_a 153.759 _cell.length_b 81.554 _cell.length_c 111.364 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 K N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 4 3 2 BMA NAG C1 O1 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG CCC 1 NAG 2 n C NAG 2 C 2 NAG CaC 2 NAG 2 n C BMA 3 C 3 BMA CbC 3 BMA 2 n D NAG 1 D 1 NAG DDD 1 NAG 2 n D NAG 2 D 2 NAG DaD 2 NAG 2 n D BMA 3 D 3 BMA DbD 3 BMA 2 n E NAG 1 E 1 NAG EEE 1 NAG 2 n E NAG 2 E 2 NAG EaE 2 NAG 2 n E BMA 3 E 3 BMA EbE 3 BMA 3 n F NAG 1 G 1 NAG GGG 715 NAG 3 n F NAG 2 G 2 NAG GaG 716 NAG 3 n G NAG 1 F 1 NAG GbG 717 NAG 3 n G NAG 2 F 2 NAG GcG 718 NAG 4 n H NAG 1 H 1 NAG HHH 706 NAG 4 n H NAG 2 H 2 NAG HaH 707 NAG 4 n H BMA 3 H 3 BMA HbH 708 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 348 1_555 A SG CYS 39 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf2 A SG CYS 17 A CYS 358 1_555 A SG CYS 30 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 A SG CYS 64 A CYS 405 1_555 A SG CYS 343 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf4 A SG CYS 84 A CYS 425 1_555 A SG CYS 306 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 A SG CYS 116 A CYS 457 1_555 A SG CYS 191 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 A SG CYS 140 A CYS 481 1_555 A SG CYS 334 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 A SG CYS 150 A CYS 491 1_555 A SG CYS 164 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf8 A SG CYS 161 A CYS 502 1_555 A SG CYS 174 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf9 A SG CYS 232 A CYS 573 1_555 A SG CYS 246 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf10 A SG CYS 284 A CYS 625 1_555 A SG CYS 289 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf11 B SG CYS 7 B CYS 348 1_555 B SG CYS 39 B CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf12 B SG CYS 17 B CYS 358 1_555 B SG CYS 30 B CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf13 B SG CYS 64 B CYS 405 1_555 B SG CYS 343 B CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf14 B SG CYS 84 B CYS 425 1_555 B SG CYS 306 B CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf15 B SG CYS 116 B CYS 457 1_555 B SG CYS 191 B CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf16 B SG CYS 140 B CYS 481 1_555 B SG CYS 334 B CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf17 B SG CYS 150 B CYS 491 1_555 B SG CYS 164 B CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf18 B SG CYS 161 B CYS 502 1_555 B SG CYS 174 B CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf19 B SG CYS 232 B CYS 573 1_555 B SG CYS 246 B CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf20 B SG CYS 284 B CYS 625 1_555 B SG CYS 289 B CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? covale ? covale1 A ND2 ASN 27 A ASN 368 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 A ND2 ASN 135 A ASN 476 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale3 A ND2 ASN 204 A ASN 545 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale4 B ND2 ASN 27 B ASN 368 1_555 F C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.486 ? covale ? covale5 B ND2 ASN 135 B ASN 476 1_555 G C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale6 B ND2 ASN 204 B ASN 545 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? covale ? covale7 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale8 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale9 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale10 D O4 NAG . D NAG 2 1_555 D C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale11 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.507 ? covale ? covale12 E O4 NAG . E NAG 2 1_555 E C1 BMA . E BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.48 ? covale ? covale13 F O4 NAG . G NAG 1 1_555 F C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale14 G O4 NAG . F NAG 1 1_555 G C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale15 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale16 H O3 NAG . H NAG 2 1_555 H C1 BMA . H BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? metalc ? metalc1 A OD2 ASP 54 A ASP 395 1_555 I FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc2 A OH TYR 92 A TYR 433 1_555 I FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 A OH TYR 185 A TYR 526 1_555 I FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 A NE2 HIS 254 A HIS 595 1_555 I FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc5 I FE FE . A FE 701 1_555 J O1 BCT . A BCT 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc6 I FE FE . A FE 701 1_555 J O2 BCT . A BCT 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc7 B OD2 ASP 54 B ASP 395 1_555 K FE FE . B FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc8 B OH TYR 92 B TYR 433 1_555 K FE FE . B FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc9 B OH TYR 185 B TYR 526 1_555 K FE FE . B FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc10 B NE2 HIS 254 B HIS 595 1_555 K FE FE . B FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc11 K FE FE . B FE 701 1_555 L O2 BCT . B BCT 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc12 K FE FE . B FE 701 1_555 L O3 BCT . B BCT 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7EQU _atom_sites.fract_transf_matrix[1][1] 0.006504 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005447 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FE A 1 701 704 FE FE . J 6 BCT A 1 702 705 BCT BCT . K 5 FE B 1 701 706 FE FE . L 6 BCT B 1 702 707 BCT BCT . M 7 HOH A 1 801 4 HOH HOH . M 7 HOH A 2 802 6 HOH HOH . M 7 HOH A 3 803 7 HOH HOH . M 7 HOH A 4 804 1 HOH HOH . M 7 HOH A 5 805 5 HOH HOH . M 7 HOH A 6 806 3 HOH HOH . M 7 HOH A 7 807 2 HOH HOH . N 7 HOH B 1 801 11 HOH HOH . N 7 HOH B 2 802 9 HOH HOH . N 7 HOH B 3 803 10 HOH HOH . N 7 HOH B 4 804 12 HOH HOH . N 7 HOH B 5 805 8 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 5 _atom_site.Cartn_x 18.51 _atom_site.Cartn_y -20.467 _atom_site.Cartn_z 44.835 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 99.84 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #