data_7EQV
#
_model_server_result.job_id            RXrAuLMlTLUG2LaQkdoFUw 
_model_server_result.datetime_utc      '2024-10-19 16:22:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7eqv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    7EQV 
#
_exptl.entry_id    7EQV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7EQV 
_cell.length_a            149.396 
_cell.length_b            149.396 
_cell.length_c            62.175 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EQV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 41.45 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 181 A HIS 188 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc2 A OE2 GLU 183 A GLU 190 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc3 A SG CYS 227 A CYS 234 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc4 A NE2 HIS 233 A HIS 240 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc5 A SG CYS 299 A CYS 306 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc6 A SG CYS 301 A CYS 308 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc7 B O3 DHB . A DHB 401 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc8 B O4 DHB . A DHB 401 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.721 ? 
metalc ? metalc9 C NI NI . A NI 402 1_555 F O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7EQV 
_atom_sites.fract_transf_matrix[1][1]    0.006694 
_atom_sites.fract_transf_matrix[1][2]    0.003865 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007729 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016084 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DHB A 1 401 401 DHB DHB . 
C 3 NI A 1 402 501 NI NI . 
D 4 ZN A 1 403 502 ZN ZN . 
E 5 CL A 1 404 503 CL CL . 
F 6 HOH A 1 501 793 HOH HOH . 
F 6 HOH A 2 502 791 HOH HOH . 
F 6 HOH A 3 503 747 HOH HOH . 
F 6 HOH A 4 504 752 HOH HOH . 
F 6 HOH A 5 505 731 HOH HOH . 
F 6 HOH A 6 506 734 HOH HOH . 
F 6 HOH A 7 507 797 HOH HOH . 
F 6 HOH A 8 508 743 HOH HOH . 
F 6 HOH A 9 509 757 HOH HOH . 
F 6 HOH A 10 510 627 HOH HOH . 
F 6 HOH A 11 511 784 HOH HOH . 
F 6 HOH A 12 512 631 HOH HOH . 
F 6 HOH A 13 513 795 HOH HOH . 
F 6 HOH A 14 514 765 HOH HOH . 
F 6 HOH A 15 515 762 HOH HOH . 
F 6 HOH A 16 516 684 HOH HOH . 
F 6 HOH A 17 517 622 HOH HOH . 
F 6 HOH A 18 518 674 HOH HOH . 
F 6 HOH A 19 519 764 HOH HOH . 
F 6 HOH A 20 520 794 HOH HOH . 
F 6 HOH A 21 521 769 HOH HOH . 
F 6 HOH A 22 522 606 HOH HOH . 
F 6 HOH A 23 523 746 HOH HOH . 
F 6 HOH A 24 524 726 HOH HOH . 
F 6 HOH A 25 525 792 HOH HOH . 
F 6 HOH A 26 526 654 HOH HOH . 
F 6 HOH A 27 527 745 HOH HOH . 
F 6 HOH A 28 528 604 HOH HOH . 
F 6 HOH A 29 529 707 HOH HOH . 
F 6 HOH A 30 530 714 HOH HOH . 
F 6 HOH A 31 531 688 HOH HOH . 
F 6 HOH A 32 532 635 HOH HOH . 
F 6 HOH A 33 533 640 HOH HOH . 
F 6 HOH A 34 534 656 HOH HOH . 
F 6 HOH A 35 535 754 HOH HOH . 
F 6 HOH A 36 536 748 HOH HOH . 
F 6 HOH A 37 537 700 HOH HOH . 
F 6 HOH A 38 538 723 HOH HOH . 
F 6 HOH A 39 539 719 HOH HOH . 
F 6 HOH A 40 540 736 HOH HOH . 
F 6 HOH A 41 541 612 HOH HOH . 
F 6 HOH A 42 542 703 HOH HOH . 
F 6 HOH A 43 543 634 HOH HOH . 
F 6 HOH A 44 544 624 HOH HOH . 
F 6 HOH A 45 545 695 HOH HOH . 
F 6 HOH A 46 546 617 HOH HOH . 
F 6 HOH A 47 547 735 HOH HOH . 
F 6 HOH A 48 548 641 HOH HOH . 
F 6 HOH A 49 549 639 HOH HOH . 
F 6 HOH A 50 550 779 HOH HOH . 
F 6 HOH A 51 551 619 HOH HOH . 
F 6 HOH A 52 552 671 HOH HOH . 
F 6 HOH A 53 553 741 HOH HOH . 
F 6 HOH A 54 554 737 HOH HOH . 
F 6 HOH A 55 555 744 HOH HOH . 
F 6 HOH A 56 556 609 HOH HOH . 
F 6 HOH A 57 557 611 HOH HOH . 
F 6 HOH A 58 558 653 HOH HOH . 
F 6 HOH A 59 559 772 HOH HOH . 
F 6 HOH A 60 560 781 HOH HOH . 
F 6 HOH A 61 561 718 HOH HOH . 
F 6 HOH A 62 562 605 HOH HOH . 
F 6 HOH A 63 563 601 HOH HOH . 
F 6 HOH A 64 564 740 HOH HOH . 
F 6 HOH A 65 565 691 HOH HOH . 
F 6 HOH A 66 566 632 HOH HOH . 
F 6 HOH A 67 567 730 HOH HOH . 
F 6 HOH A 68 568 709 HOH HOH . 
F 6 HOH A 69 569 708 HOH HOH . 
F 6 HOH A 70 570 712 HOH HOH . 
F 6 HOH A 71 571 602 HOH HOH . 
F 6 HOH A 72 572 780 HOH HOH . 
F 6 HOH A 73 573 661 HOH HOH . 
F 6 HOH A 74 574 673 HOH HOH . 
F 6 HOH A 75 575 783 HOH HOH . 
F 6 HOH A 76 576 608 HOH HOH . 
F 6 HOH A 77 577 729 HOH HOH . 
F 6 HOH A 78 578 686 HOH HOH . 
F 6 HOH A 79 579 768 HOH HOH . 
F 6 HOH A 80 580 603 HOH HOH . 
F 6 HOH A 81 581 760 HOH HOH . 
F 6 HOH A 82 582 689 HOH HOH . 
F 6 HOH A 83 583 687 HOH HOH . 
F 6 HOH A 84 584 766 HOH HOH . 
F 6 HOH A 85 585 683 HOH HOH . 
F 6 HOH A 86 586 782 HOH HOH . 
F 6 HOH A 87 587 636 HOH HOH . 
F 6 HOH A 88 588 720 HOH HOH . 
F 6 HOH A 89 589 778 HOH HOH . 
F 6 HOH A 90 590 753 HOH HOH . 
F 6 HOH A 91 591 750 HOH HOH . 
F 6 HOH A 92 592 696 HOH HOH . 
F 6 HOH A 93 593 652 HOH HOH . 
F 6 HOH A 94 594 775 HOH HOH . 
F 6 HOH A 95 595 774 HOH HOH . 
F 6 HOH A 96 596 626 HOH HOH . 
F 6 HOH A 97 597 738 HOH HOH . 
F 6 HOH A 98 598 643 HOH HOH . 
F 6 HOH A 99 599 697 HOH HOH . 
F 6 HOH A 100 600 629 HOH HOH . 
F 6 HOH A 101 601 668 HOH HOH . 
F 6 HOH A 102 602 618 HOH HOH . 
F 6 HOH A 103 603 722 HOH HOH . 
F 6 HOH A 104 604 649 HOH HOH . 
F 6 HOH A 105 605 771 HOH HOH . 
F 6 HOH A 106 606 786 HOH HOH . 
F 6 HOH A 107 607 759 HOH HOH . 
F 6 HOH A 108 608 644 HOH HOH . 
F 6 HOH A 109 609 638 HOH HOH . 
F 6 HOH A 110 610 763 HOH HOH . 
F 6 HOH A 111 611 637 HOH HOH . 
F 6 HOH A 112 612 755 HOH HOH . 
F 6 HOH A 113 613 767 HOH HOH . 
F 6 HOH A 114 614 727 HOH HOH . 
F 6 HOH A 115 615 732 HOH HOH . 
F 6 HOH A 116 616 724 HOH HOH . 
F 6 HOH A 117 617 628 HOH HOH . 
F 6 HOH A 118 618 721 HOH HOH . 
F 6 HOH A 119 619 667 HOH HOH . 
F 6 HOH A 120 620 716 HOH HOH . 
F 6 HOH A 121 621 715 HOH HOH . 
F 6 HOH A 122 622 751 HOH HOH . 
F 6 HOH A 123 623 702 HOH HOH . 
F 6 HOH A 124 624 614 HOH HOH . 
F 6 HOH A 125 625 690 HOH HOH . 
F 6 HOH A 126 626 725 HOH HOH . 
F 6 HOH A 127 627 710 HOH HOH . 
F 6 HOH A 128 628 777 HOH HOH . 
F 6 HOH A 129 629 694 HOH HOH . 
F 6 HOH A 130 630 761 HOH HOH . 
F 6 HOH A 131 631 648 HOH HOH . 
F 6 HOH A 132 632 776 HOH HOH . 
F 6 HOH A 133 633 789 HOH HOH . 
F 6 HOH A 134 634 664 HOH HOH . 
F 6 HOH A 135 635 758 HOH HOH . 
F 6 HOH A 136 636 660 HOH HOH . 
F 6 HOH A 137 637 658 HOH HOH . 
F 6 HOH A 138 638 770 HOH HOH . 
F 6 HOH A 139 639 717 HOH HOH . 
F 6 HOH A 140 640 692 HOH HOH . 
F 6 HOH A 141 641 675 HOH HOH . 
F 6 HOH A 142 642 669 HOH HOH . 
F 6 HOH A 143 643 796 HOH HOH . 
F 6 HOH A 144 644 728 HOH HOH . 
F 6 HOH A 145 645 742 HOH HOH . 
F 6 HOH A 146 646 677 HOH HOH . 
F 6 HOH A 147 647 790 HOH HOH . 
F 6 HOH A 148 648 705 HOH HOH . 
F 6 HOH A 149 649 645 HOH HOH . 
F 6 HOH A 150 650 785 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -69.351 
_atom_site.Cartn_y               17.905 
_atom_site.Cartn_z               9.171 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        58.37 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#