data_7ERD # _model_server_result.job_id -_YAp8eHj2mTDPPaeTnSrw _model_server_result.datetime_utc '2024-10-14 02:38:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7erd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 7ERD # _exptl.entry_id 7ERD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 296.245 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[[2-methyl-3-(trifluoromethyl)phenyl]amino]pyridine-3-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ERD _cell.length_a 81.821 _cell.length_b 116.996 _cell.length_c 41.615 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ERD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C14 H11 F3 N2 O2' _chem_comp.formula_weight 296.245 _chem_comp.id JBO _chem_comp.mon_nstd_flag . _chem_comp.name '2-[[2-methyl-3-(trifluoromethyl)phenyl]amino]pyridine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C20 JBO doub 173 n y C19 C18 JBO sing 174 n y C20 C04 JBO sing 175 n y C16 N17 JBO doub 176 n y C16 C15 JBO sing 177 n y F21 C02 JBO sing 178 n n F01 C02 JBO sing 179 n n C18 C07 JBO doub 180 n y N17 C09 JBO sing 181 n y C04 C02 JBO sing 182 n n C04 C05 JBO doub 183 n y C02 F03 JBO sing 184 n n C15 C14 JBO doub 185 n y C07 C05 JBO sing 186 n y C07 N08 JBO sing 187 n n C05 C06 JBO sing 188 n n C09 N08 JBO sing 189 n n C09 C10 JBO doub 190 n y C14 C10 JBO sing 191 n y C10 C11 JBO sing 192 n n O13 C11 JBO doub 193 n n C11 O12 JBO sing 194 n n C06 H1 JBO sing 195 n n C06 H2 JBO sing 196 n n C06 H3 JBO sing 197 n n C14 H4 JBO sing 198 n n C15 H5 JBO sing 199 n n C16 H6 JBO sing 200 n n C18 H7 JBO sing 201 n n C19 H8 JBO sing 202 n n C20 H9 JBO sing 203 n n N08 H10 JBO sing 204 n n O12 H11 JBO sing 205 n n # _atom_sites.entry_id 7ERD _atom_sites.fract_transf_matrix[1][1] 0.012222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02403 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 401 401 NAP NAP . D 3 JBO A 1 402 501 JBO FMG . E 4 SO4 A 1 403 2 SO4 SO4 . F 2 NAP B 1 401 401 NAP NAP . G 3 JBO B 1 402 501 JBO FMG . H 4 SO4 B 1 403 1 SO4 SO4 . I 5 HOH A 1 501 62 HOH HOH . I 5 HOH A 2 502 110 HOH HOH . I 5 HOH A 3 503 96 HOH HOH . I 5 HOH A 4 504 2 HOH HOH . I 5 HOH A 5 505 34 HOH HOH . I 5 HOH A 6 506 162 HOH HOH . I 5 HOH A 7 507 5 HOH HOH . I 5 HOH A 8 508 80 HOH HOH . I 5 HOH A 9 509 58 HOH HOH . I 5 HOH A 10 510 54 HOH HOH . I 5 HOH A 11 511 35 HOH HOH . I 5 HOH A 12 512 23 HOH HOH . I 5 HOH A 13 513 84 HOH HOH . I 5 HOH A 14 514 13 HOH HOH . I 5 HOH A 15 515 38 HOH HOH . I 5 HOH A 16 516 44 HOH HOH . I 5 HOH A 17 517 47 HOH HOH . I 5 HOH A 18 518 75 HOH HOH . I 5 HOH A 19 519 89 HOH HOH . I 5 HOH A 20 520 151 HOH HOH . I 5 HOH A 21 521 3 HOH HOH . I 5 HOH A 22 522 50 HOH HOH . I 5 HOH A 23 523 19 HOH HOH . I 5 HOH A 24 524 1 HOH HOH . I 5 HOH A 25 525 103 HOH HOH . I 5 HOH A 26 526 33 HOH HOH . I 5 HOH A 27 527 8 HOH HOH . I 5 HOH A 28 528 135 HOH HOH . I 5 HOH A 29 529 6 HOH HOH . I 5 HOH A 30 530 112 HOH HOH . I 5 HOH A 31 531 9 HOH HOH . I 5 HOH A 32 532 146 HOH HOH . I 5 HOH A 33 533 27 HOH HOH . I 5 HOH A 34 534 42 HOH HOH . I 5 HOH A 35 535 11 HOH HOH . I 5 HOH A 36 536 91 HOH HOH . I 5 HOH A 37 537 26 HOH HOH . I 5 HOH A 38 538 95 HOH HOH . I 5 HOH A 39 539 24 HOH HOH . I 5 HOH A 40 540 36 HOH HOH . I 5 HOH A 41 541 28 HOH HOH . I 5 HOH A 42 542 57 HOH HOH . I 5 HOH A 43 543 51 HOH HOH . I 5 HOH A 44 544 177 HOH HOH . I 5 HOH A 45 545 186 HOH HOH . I 5 HOH A 46 546 127 HOH HOH . I 5 HOH A 47 547 116 HOH HOH . I 5 HOH A 48 548 4 HOH HOH . I 5 HOH A 49 549 55 HOH HOH . I 5 HOH A 50 550 12 HOH HOH . I 5 HOH A 51 551 165 HOH HOH . I 5 HOH A 52 552 7 HOH HOH . I 5 HOH A 53 553 63 HOH HOH . I 5 HOH A 54 554 207 HOH HOH . I 5 HOH A 55 555 155 HOH HOH . I 5 HOH A 56 556 32 HOH HOH . I 5 HOH A 57 557 179 HOH HOH . I 5 HOH A 58 558 92 HOH HOH . I 5 HOH A 59 559 119 HOH HOH . I 5 HOH A 60 560 111 HOH HOH . I 5 HOH A 61 561 29 HOH HOH . I 5 HOH A 62 562 70 HOH HOH . I 5 HOH A 63 563 86 HOH HOH . I 5 HOH A 64 564 102 HOH HOH . I 5 HOH A 65 565 147 HOH HOH . I 5 HOH A 66 566 161 HOH HOH . I 5 HOH A 67 567 174 HOH HOH . I 5 HOH A 68 568 171 HOH HOH . I 5 HOH A 69 569 149 HOH HOH . I 5 HOH A 70 570 37 HOH HOH . I 5 HOH A 71 571 159 HOH HOH . I 5 HOH A 72 572 142 HOH HOH . I 5 HOH A 73 573 10 HOH HOH . I 5 HOH A 74 574 126 HOH HOH . I 5 HOH A 75 575 132 HOH HOH . I 5 HOH A 76 576 128 HOH HOH . I 5 HOH A 77 577 94 HOH HOH . I 5 HOH A 78 578 14 HOH HOH . I 5 HOH A 79 579 76 HOH HOH . I 5 HOH A 80 580 82 HOH HOH . I 5 HOH A 81 581 200 HOH HOH . I 5 HOH A 82 582 56 HOH HOH . I 5 HOH A 83 583 117 HOH HOH . I 5 HOH A 84 584 172 HOH HOH . I 5 HOH A 85 585 114 HOH HOH . I 5 HOH A 86 586 87 HOH HOH . I 5 HOH A 87 587 67 HOH HOH . I 5 HOH A 88 588 65 HOH HOH . I 5 HOH A 89 589 123 HOH HOH . I 5 HOH A 90 590 137 HOH HOH . I 5 HOH A 91 591 97 HOH HOH . I 5 HOH A 92 592 122 HOH HOH . I 5 HOH A 93 593 203 HOH HOH . I 5 HOH A 94 594 205 HOH HOH . I 5 HOH A 95 595 53 HOH HOH . I 5 HOH A 96 596 138 HOH HOH . I 5 HOH A 97 597 154 HOH HOH . I 5 HOH A 98 598 195 HOH HOH . I 5 HOH A 99 599 115 HOH HOH . I 5 HOH A 100 600 168 HOH HOH . I 5 HOH A 101 601 140 HOH HOH . I 5 HOH A 102 602 206 HOH HOH . I 5 HOH A 103 603 101 HOH HOH . I 5 HOH A 104 604 124 HOH HOH . I 5 HOH A 105 605 136 HOH HOH . I 5 HOH A 106 606 129 HOH HOH . I 5 HOH A 107 607 196 HOH HOH . I 5 HOH A 108 608 156 HOH HOH . I 5 HOH A 109 609 141 HOH HOH . I 5 HOH A 110 610 130 HOH HOH . I 5 HOH A 111 611 181 HOH HOH . I 5 HOH A 112 612 106 HOH HOH . I 5 HOH A 113 613 64 HOH HOH . I 5 HOH A 114 614 163 HOH HOH . I 5 HOH A 115 615 201 HOH HOH . J 5 HOH B 1 501 98 HOH HOH . J 5 HOH B 2 502 99 HOH HOH . J 5 HOH B 3 503 52 HOH HOH . J 5 HOH B 4 504 158 HOH HOH . J 5 HOH B 5 505 83 HOH HOH . J 5 HOH B 6 506 15 HOH HOH . J 5 HOH B 7 507 85 HOH HOH . J 5 HOH B 8 508 131 HOH HOH . J 5 HOH B 9 509 93 HOH HOH . J 5 HOH B 10 510 121 HOH HOH . J 5 HOH B 11 511 167 HOH HOH . J 5 HOH B 12 512 78 HOH HOH . J 5 HOH B 13 513 184 HOH HOH . J 5 HOH B 14 514 104 HOH HOH . J 5 HOH B 15 515 45 HOH HOH . J 5 HOH B 16 516 180 HOH HOH . J 5 HOH B 17 517 21 HOH HOH . J 5 HOH B 18 518 79 HOH HOH . J 5 HOH B 19 519 41 HOH HOH . J 5 HOH B 20 520 118 HOH HOH . J 5 HOH B 21 521 71 HOH HOH . J 5 HOH B 22 522 143 HOH HOH . J 5 HOH B 23 523 153 HOH HOH . J 5 HOH B 24 524 107 HOH HOH . J 5 HOH B 25 525 152 HOH HOH . J 5 HOH B 26 526 31 HOH HOH . J 5 HOH B 27 527 120 HOH HOH . J 5 HOH B 28 528 61 HOH HOH . J 5 HOH B 29 529 81 HOH HOH . J 5 HOH B 30 530 22 HOH HOH . J 5 HOH B 31 531 43 HOH HOH . J 5 HOH B 32 532 18 HOH HOH . J 5 HOH B 33 533 72 HOH HOH . J 5 HOH B 34 534 17 HOH HOH . J 5 HOH B 35 535 69 HOH HOH . J 5 HOH B 36 536 113 HOH HOH . J 5 HOH B 37 537 100 HOH HOH . J 5 HOH B 38 538 134 HOH HOH . J 5 HOH B 39 539 39 HOH HOH . J 5 HOH B 40 540 16 HOH HOH . J 5 HOH B 41 541 48 HOH HOH . J 5 HOH B 42 542 109 HOH HOH . J 5 HOH B 43 543 173 HOH HOH . J 5 HOH B 44 544 25 HOH HOH . J 5 HOH B 45 545 144 HOH HOH . J 5 HOH B 46 546 46 HOH HOH . J 5 HOH B 47 547 20 HOH HOH . J 5 HOH B 48 548 188 HOH HOH . J 5 HOH B 49 549 66 HOH HOH . J 5 HOH B 50 550 125 HOH HOH . J 5 HOH B 51 551 73 HOH HOH . J 5 HOH B 52 552 60 HOH HOH . J 5 HOH B 53 553 88 HOH HOH . J 5 HOH B 54 554 189 HOH HOH . J 5 HOH B 55 555 164 HOH HOH . J 5 HOH B 56 556 49 HOH HOH . J 5 HOH B 57 557 105 HOH HOH . J 5 HOH B 58 558 198 HOH HOH . J 5 HOH B 59 559 68 HOH HOH . J 5 HOH B 60 560 202 HOH HOH . J 5 HOH B 61 561 108 HOH HOH . J 5 HOH B 62 562 133 HOH HOH . J 5 HOH B 63 563 40 HOH HOH . J 5 HOH B 64 564 74 HOH HOH . J 5 HOH B 65 565 204 HOH HOH . J 5 HOH B 66 566 157 HOH HOH . J 5 HOH B 67 567 187 HOH HOH . J 5 HOH B 68 568 175 HOH HOH . J 5 HOH B 69 569 183 HOH HOH . J 5 HOH B 70 570 166 HOH HOH . J 5 HOH B 71 571 30 HOH HOH . J 5 HOH B 72 572 190 HOH HOH . J 5 HOH B 73 573 199 HOH HOH . J 5 HOH B 74 574 192 HOH HOH . J 5 HOH B 75 575 148 HOH HOH . J 5 HOH B 76 576 59 HOH HOH . J 5 HOH B 77 577 145 HOH HOH . J 5 HOH B 78 578 197 HOH HOH . J 5 HOH B 79 579 77 HOH HOH . J 5 HOH B 80 580 169 HOH HOH . J 5 HOH B 81 581 191 HOH HOH . J 5 HOH B 82 582 150 HOH HOH . J 5 HOH B 83 583 170 HOH HOH . J 5 HOH B 84 584 193 HOH HOH . J 5 HOH B 85 585 160 HOH HOH . J 5 HOH B 86 586 182 HOH HOH . J 5 HOH B 87 587 178 HOH HOH . J 5 HOH B 88 588 176 HOH HOH . J 5 HOH B 89 589 194 HOH HOH . J 5 HOH B 90 590 139 HOH HOH . J 5 HOH B 91 591 185 HOH HOH . J 5 HOH B 92 592 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 JBO . . . G 3 -35.853 -11.719 3.43 1 45.83 ? C02 JBO 402 B 1 HETATM 2 C C04 JBO . . . G 3 -35.609 -11.895 5.008 1 43.63 ? C04 JBO 402 B 1 HETATM 3 C C05 JBO . . . G 3 -34.371 -11.672 5.608 1 42.22 ? C05 JBO 402 B 1 HETATM 4 C C06 JBO . . . G 3 -33.18 -11.266 4.826 1 41.13 ? C06 JBO 402 B 1 HETATM 5 C C07 JBO . . . G 3 -34.216 -11.831 6.998 1 42.07 ? C07 JBO 402 B 1 HETATM 6 C C09 JBO . . . G 3 -32.453 -11.722 8.937 1 42.16 ? C09 JBO 402 B 1 HETATM 7 C C10 JBO . . . G 3 -31.176 -11.258 9.277 1 40.92 ? C10 JBO 402 B 1 HETATM 8 C C11 JBO . . . G 3 -30.295 -10.657 8.213 1 39.92 ? C11 JBO 402 B 1 HETATM 9 C C14 JBO . . . G 3 -30.691 -11.343 10.577 1 41.03 ? C14 JBO 402 B 1 HETATM 10 C C15 JBO . . . G 3 -31.549 -11.92 11.534 1 41.89 ? C15 JBO 402 B 1 HETATM 11 C C16 JBO . . . G 3 -32.816 -12.362 11.144 1 42.45 ? C16 JBO 402 B 1 HETATM 12 C C18 JBO . . . G 3 -35.273 -12.208 7.782 1 42.04 ? C18 JBO 402 B 1 HETATM 13 C C19 JBO . . . G 3 -36.513 -12.424 7.198 1 42.32 ? C19 JBO 402 B 1 HETATM 14 C C20 JBO . . . G 3 -36.67 -12.267 5.824 1 43.05 ? C20 JBO 402 B 1 HETATM 15 F F01 JBO . . . G 3 -35.09 -12.613 2.697 1 45.79 ? F01 JBO 402 B 1 HETATM 16 F F03 JBO . . . G 3 -37.125 -11.911 3.128 1 46.41 ? F03 JBO 402 B 1 HETATM 17 F F21 JBO . . . G 3 -35.49 -10.468 3.025 1 46.58 ? F21 JBO 402 B 1 HETATM 18 N N08 JBO . . . G 3 -32.875 -11.588 7.535 1 42.2 ? N08 JBO 402 B 1 HETATM 19 N N17 JBO . . . G 3 -33.237 -12.257 9.877 1 42.47 ? N17 JBO 402 B 1 HETATM 20 O O12 JBO . . . G 3 -29.085 -10.35 8.544 1 39.92 ? O12 JBO 402 B 1 HETATM 21 O O13 JBO . . . G 3 -30.725 -10.458 7.039 1 38.84 ? O13 JBO 402 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #