data_7ERX # _model_server_result.job_id fQ1ADp97_q-Dg-4JEE903Q _model_server_result.datetime_utc '2024-10-19 14:50:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7erx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7ERX # _exptl.entry_id 7ERX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ERX _cell.length_a 54.482 _cell.length_b 83.173 _cell.length_c 109.391 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ERX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ERX _atom_sites.fract_transf_matrix[1][1] 0.018355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 501 GOL GOL . C 3 UDP A 1 502 601 UDP UDP . D 4 JC6 A 1 503 602 JC6 STB . E 5 HOH A 1 601 44 HOH HOH . E 5 HOH A 2 602 54 HOH HOH . E 5 HOH A 3 603 5 HOH HOH . E 5 HOH A 4 604 38 HOH HOH . E 5 HOH A 5 605 36 HOH HOH . E 5 HOH A 6 606 17 HOH HOH . E 5 HOH A 7 607 8 HOH HOH . E 5 HOH A 8 608 12 HOH HOH . E 5 HOH A 9 609 103 HOH HOH . E 5 HOH A 10 610 88 HOH HOH . E 5 HOH A 11 611 6 HOH HOH . E 5 HOH A 12 612 71 HOH HOH . E 5 HOH A 13 613 29 HOH HOH . E 5 HOH A 14 614 46 HOH HOH . E 5 HOH A 15 615 98 HOH HOH . E 5 HOH A 16 616 41 HOH HOH . E 5 HOH A 17 617 42 HOH HOH . E 5 HOH A 18 618 105 HOH HOH . E 5 HOH A 19 619 63 HOH HOH . E 5 HOH A 20 620 28 HOH HOH . E 5 HOH A 21 621 9 HOH HOH . E 5 HOH A 22 622 25 HOH HOH . E 5 HOH A 23 623 7 HOH HOH . E 5 HOH A 24 624 23 HOH HOH . E 5 HOH A 25 625 264 HOH HOH . E 5 HOH A 26 626 45 HOH HOH . E 5 HOH A 27 627 221 HOH HOH . E 5 HOH A 28 628 61 HOH HOH . E 5 HOH A 29 629 40 HOH HOH . E 5 HOH A 30 630 261 HOH HOH . E 5 HOH A 31 631 263 HOH HOH . E 5 HOH A 32 632 13 HOH HOH . E 5 HOH A 33 633 69 HOH HOH . E 5 HOH A 34 634 144 HOH HOH . E 5 HOH A 35 635 21 HOH HOH . E 5 HOH A 36 636 85 HOH HOH . E 5 HOH A 37 637 100 HOH HOH . E 5 HOH A 38 638 143 HOH HOH . E 5 HOH A 39 639 64 HOH HOH . E 5 HOH A 40 640 262 HOH HOH . E 5 HOH A 41 641 84 HOH HOH . E 5 HOH A 42 642 75 HOH HOH . E 5 HOH A 43 643 114 HOH HOH . E 5 HOH A 44 644 99 HOH HOH . E 5 HOH A 45 645 2 HOH HOH . E 5 HOH A 46 646 3 HOH HOH . E 5 HOH A 47 647 30 HOH HOH . E 5 HOH A 48 648 18 HOH HOH . E 5 HOH A 49 649 35 HOH HOH . E 5 HOH A 50 650 20 HOH HOH . E 5 HOH A 51 651 57 HOH HOH . E 5 HOH A 52 652 31 HOH HOH . E 5 HOH A 53 653 14 HOH HOH . E 5 HOH A 54 654 24 HOH HOH . E 5 HOH A 55 655 4 HOH HOH . E 5 HOH A 56 656 73 HOH HOH . E 5 HOH A 57 657 102 HOH HOH . E 5 HOH A 58 658 96 HOH HOH . E 5 HOH A 59 659 39 HOH HOH . E 5 HOH A 60 660 76 HOH HOH . E 5 HOH A 61 661 198 HOH HOH . E 5 HOH A 62 662 255 HOH HOH . E 5 HOH A 63 663 34 HOH HOH . E 5 HOH A 64 664 19 HOH HOH . E 5 HOH A 65 665 16 HOH HOH . E 5 HOH A 66 666 66 HOH HOH . E 5 HOH A 67 667 68 HOH HOH . E 5 HOH A 68 668 258 HOH HOH . E 5 HOH A 69 669 49 HOH HOH . E 5 HOH A 70 670 53 HOH HOH . E 5 HOH A 71 671 78 HOH HOH . E 5 HOH A 72 672 101 HOH HOH . E 5 HOH A 73 673 47 HOH HOH . E 5 HOH A 74 674 259 HOH HOH . E 5 HOH A 75 675 257 HOH HOH . E 5 HOH A 76 676 254 HOH HOH . E 5 HOH A 77 677 1 HOH HOH . E 5 HOH A 78 678 11 HOH HOH . E 5 HOH A 79 679 260 HOH HOH . E 5 HOH A 80 680 194 HOH HOH . E 5 HOH A 81 681 56 HOH HOH . E 5 HOH A 82 682 239 HOH HOH . E 5 HOH A 83 683 157 HOH HOH . E 5 HOH A 84 684 62 HOH HOH . E 5 HOH A 85 685 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -7.398 -7.066 24.837 1 48.45 0 C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . B 2 -8.071 -7.793 25.863 1 49.34 0 O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . B 2 -8.39 -6.442 23.878 1 48.12 0 C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . B 2 -7.754 -5.453 23.076 1 42.87 0 O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . B 2 -9.076 -7.449 22.985 1 45.87 0 C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . B 2 -10.234 -6.875 22.387 1 49.83 0 O3 GOL 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #