data_7ESE # _model_server_result.job_id 99JGsPsF4rwesTLixB-hLA _model_server_result.datetime_utc '2024-11-23 04:44:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ese # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7ESE # _exptl.entry_id 7ESE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ESE _cell.length_a 61.569 _cell.length_b 61.569 _cell.length_c 94.068 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ESE _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 290 n n PA O2A NAP sing 291 n n PA O5B NAP sing 292 n n PA O3 NAP sing 293 n n O2A HOA2 NAP sing 294 n n O5B C5B NAP sing 295 n n C5B C4B NAP sing 296 n n C5B H51A NAP sing 297 n n C5B H52A NAP sing 298 n n C4B O4B NAP sing 299 n n C4B C3B NAP sing 300 n n C4B H4B NAP sing 301 n n O4B C1B NAP sing 302 n n C3B O3B NAP sing 303 n n C3B C2B NAP sing 304 n n C3B H3B NAP sing 305 n n O3B HO3A NAP sing 306 n n C2B O2B NAP sing 307 n n C2B C1B NAP sing 308 n n C2B H2B NAP sing 309 n n O2B P2B NAP sing 310 n n C1B N9A NAP sing 311 n n C1B H1B NAP sing 312 n n N9A C8A NAP sing 313 n y N9A C4A NAP sing 314 n y C8A N7A NAP doub 315 n y C8A H8A NAP sing 316 n n N7A C5A NAP sing 317 n y C5A C6A NAP sing 318 n y C5A C4A NAP doub 319 n y C6A N6A NAP sing 320 n n C6A N1A NAP doub 321 n y N6A H61A NAP sing 322 n n N6A H62A NAP sing 323 n n N1A C2A NAP sing 324 n y C2A N3A NAP doub 325 n y C2A H2A NAP sing 326 n n N3A C4A NAP sing 327 n y O3 PN NAP sing 328 n n PN O1N NAP doub 329 n n PN O2N NAP sing 330 n n PN O5D NAP sing 331 n n O5D C5D NAP sing 332 n n C5D C4D NAP sing 333 n n C5D H51N NAP sing 334 n n C5D H52N NAP sing 335 n n C4D O4D NAP sing 336 n n C4D C3D NAP sing 337 n n C4D H4D NAP sing 338 n n O4D C1D NAP sing 339 n n C3D O3D NAP sing 340 n n C3D C2D NAP sing 341 n n C3D H3D NAP sing 342 n n O3D HO3N NAP sing 343 n n C2D O2D NAP sing 344 n n C2D C1D NAP sing 345 n n C2D H2D NAP sing 346 n n O2D HO2N NAP sing 347 n n C1D N1N NAP sing 348 n n C1D H1D NAP sing 349 n n N1N C2N NAP sing 350 n y N1N C6N NAP doub 351 n y C2N C3N NAP doub 352 n y C2N H2N NAP sing 353 n n C3N C7N NAP sing 354 n n C3N C4N NAP sing 355 n y C7N O7N NAP doub 356 n n C7N N7N NAP sing 357 n n N7N H71N NAP sing 358 n n N7N H72N NAP sing 359 n n C4N C5N NAP doub 360 n y C4N H4N NAP sing 361 n n C5N C6N NAP sing 362 n y C5N H5N NAP sing 363 n n C6N H6N NAP sing 364 n n P2B O1X NAP doub 365 n n P2B O2X NAP sing 366 n n P2B O3X NAP sing 367 n n O2X HOP2 NAP sing 368 n n O3X HOP3 NAP sing 369 n n # _atom_sites.entry_id 7ESE _atom_sites.fract_transf_matrix[1][1] 0.016242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 1 NAP NAP . C 3 FOL A 1 202 2 FOL FOL . D 4 HOH A 1 301 35 HOH HOH . D 4 HOH A 2 302 34 HOH HOH . D 4 HOH A 3 303 45 HOH HOH . D 4 HOH A 4 304 72 HOH HOH . D 4 HOH A 5 305 43 HOH HOH . D 4 HOH A 6 306 49 HOH HOH . D 4 HOH A 7 307 64 HOH HOH . D 4 HOH A 8 308 4 HOH HOH . D 4 HOH A 9 309 2 HOH HOH . D 4 HOH A 10 310 58 HOH HOH . D 4 HOH A 11 311 51 HOH HOH . D 4 HOH A 12 312 5 HOH HOH . D 4 HOH A 13 313 23 HOH HOH . D 4 HOH A 14 314 42 HOH HOH . D 4 HOH A 15 315 18 HOH HOH . D 4 HOH A 16 316 37 HOH HOH . D 4 HOH A 17 317 17 HOH HOH . D 4 HOH A 18 318 29 HOH HOH . D 4 HOH A 19 319 9 HOH HOH . D 4 HOH A 20 320 59 HOH HOH . D 4 HOH A 21 321 22 HOH HOH . D 4 HOH A 22 322 11 HOH HOH . D 4 HOH A 23 323 6 HOH HOH . D 4 HOH A 24 324 16 HOH HOH . D 4 HOH A 25 325 76 HOH HOH . D 4 HOH A 26 326 68 HOH HOH . D 4 HOH A 27 327 15 HOH HOH . D 4 HOH A 28 328 63 HOH HOH . D 4 HOH A 29 329 48 HOH HOH . D 4 HOH A 30 330 1 HOH HOH . D 4 HOH A 31 331 12 HOH HOH . D 4 HOH A 32 332 56 HOH HOH . D 4 HOH A 33 333 21 HOH HOH . D 4 HOH A 34 334 62 HOH HOH . D 4 HOH A 35 335 39 HOH HOH . D 4 HOH A 36 336 74 HOH HOH . D 4 HOH A 37 337 44 HOH HOH . D 4 HOH A 38 338 7 HOH HOH . D 4 HOH A 39 339 20 HOH HOH . D 4 HOH A 40 340 50 HOH HOH . D 4 HOH A 41 341 19 HOH HOH . D 4 HOH A 42 342 10 HOH HOH . D 4 HOH A 43 343 75 HOH HOH . D 4 HOH A 44 344 33 HOH HOH . D 4 HOH A 45 345 57 HOH HOH . D 4 HOH A 46 346 14 HOH HOH . D 4 HOH A 47 347 65 HOH HOH . D 4 HOH A 48 348 40 HOH HOH . D 4 HOH A 49 349 38 HOH HOH . D 4 HOH A 50 350 32 HOH HOH . D 4 HOH A 51 351 3 HOH HOH . D 4 HOH A 52 352 47 HOH HOH . D 4 HOH A 53 353 46 HOH HOH . D 4 HOH A 54 354 30 HOH HOH . D 4 HOH A 55 355 25 HOH HOH . D 4 HOH A 56 356 41 HOH HOH . D 4 HOH A 57 357 54 HOH HOH . D 4 HOH A 58 358 13 HOH HOH . D 4 HOH A 59 359 27 HOH HOH . D 4 HOH A 60 360 70 HOH HOH . D 4 HOH A 61 361 77 HOH HOH . D 4 HOH A 62 362 26 HOH HOH . D 4 HOH A 63 363 8 HOH HOH . D 4 HOH A 64 364 53 HOH HOH . D 4 HOH A 65 365 52 HOH HOH . D 4 HOH A 66 366 28 HOH HOH . D 4 HOH A 67 367 60 HOH HOH . D 4 HOH A 68 368 24 HOH HOH . D 4 HOH A 69 369 61 HOH HOH . D 4 HOH A 70 370 55 HOH HOH . D 4 HOH A 71 371 66 HOH HOH . D 4 HOH A 72 372 67 HOH HOH . D 4 HOH A 73 373 69 HOH HOH . D 4 HOH A 74 374 73 HOH HOH . D 4 HOH A 75 375 71 HOH HOH . D 4 HOH A 76 376 31 HOH HOH . D 4 HOH A 77 377 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . B 2 -19.12 9.548 7.636 1 29.65 ? PA NAP 201 A 1 HETATM 2 O O1A NAP . . . B 2 -20.291 10.494 7.402 1 29.23 ? O1A NAP 201 A 1 HETATM 3 O O2A NAP . . . B 2 -17.736 9.805 7.098 1 31.43 ? O2A NAP 201 A 1 HETATM 4 O O5B NAP . . . B 2 -18.848 9.407 9.214 1 33.84 ? O5B NAP 201 A 1 HETATM 5 C C5B NAP . . . B 2 -19.93 9.116 10.108 1 36.05 ? C5B NAP 201 A 1 HETATM 6 C C4B NAP . . . B 2 -19.526 9.71 11.443 1 38.22 ? C4B NAP 201 A 1 HETATM 7 O O4B NAP . . . B 2 -18.972 11.017 11.228 1 38.47 ? O4B NAP 201 A 1 HETATM 8 C C3B NAP . . . B 2 -20.675 9.868 12.43 1 39.15 ? C3B NAP 201 A 1 HETATM 9 O O3B NAP . . . B 2 -20.889 8.679 13.193 1 37.96 ? O3B NAP 201 A 1 HETATM 10 C C2B NAP . . . B 2 -20.195 11.041 13.252 1 38.92 ? C2B NAP 201 A 1 HETATM 11 O O2B NAP . . . B 2 -19.179 10.671 14.182 1 39.56 ? O2B NAP 201 A 1 HETATM 12 C C1B NAP . . . B 2 -19.517 11.907 12.204 1 40.16 ? C1B NAP 201 A 1 HETATM 13 N N9A NAP . . . B 2 -20.485 12.836 11.591 1 40.66 ? N9A NAP 201 A 1 HETATM 14 C C8A NAP . . . B 2 -21.201 12.683 10.458 1 40.48 ? C8A NAP 201 A 1 HETATM 15 N N7A NAP . . . B 2 -21.981 13.778 10.242 1 41.2 ? N7A NAP 201 A 1 HETATM 16 C C5A NAP . . . B 2 -21.763 14.641 11.254 1 40.98 ? C5A NAP 201 A 1 HETATM 17 C C6A NAP . . . B 2 -22.243 15.983 11.658 1 41.35 ? C6A NAP 201 A 1 HETATM 18 N N6A NAP . . . B 2 -23.15 16.643 10.914 1 42.31 ? N6A NAP 201 A 1 HETATM 19 N N1A NAP . . . B 2 -21.755 16.522 12.796 1 42.11 ? N1A NAP 201 A 1 HETATM 20 C C2A NAP . . . B 2 -20.85 15.871 13.564 1 44.27 ? C2A NAP 201 A 1 HETATM 21 N N3A NAP . . . B 2 -20.365 14.652 13.251 1 42.86 ? N3A NAP 201 A 1 HETATM 22 C C4A NAP . . . B 2 -20.78 14.009 12.137 1 41.45 ? C4A NAP 201 A 1 HETATM 23 O O3 NAP . . . B 2 -19.611 8.001 7.452 1 31.31 ? O3 NAP 201 A 1 HETATM 24 P PN NAP . . . B 2 -20.261 7.245 6.176 1 33.81 ? PN NAP 201 A 1 HETATM 25 O O1N NAP . . . B 2 -20.384 5.783 6.561 1 32.09 ? O1N NAP 201 A 1 HETATM 26 O O2N NAP . . . B 2 -21.496 7.979 5.726 1 31.98 ? O2N NAP 201 A 1 HETATM 27 O O5D NAP . . . B 2 -19.094 7.307 5.065 1 31.79 ? O5D NAP 201 A 1 HETATM 28 C C5D NAP . . . B 2 -17.946 6.452 5.122 1 30.57 ? C5D NAP 201 A 1 HETATM 29 C C4D NAP . . . B 2 -18.02 5.389 4.024 1 30.34 ? C4D NAP 201 A 1 HETATM 30 O O4D NAP . . . B 2 -18.366 6.008 2.784 1 30.05 ? O4D NAP 201 A 1 HETATM 31 C C3D NAP . . . B 2 -16.697 4.697 3.742 1 29.79 ? C3D NAP 201 A 1 HETATM 32 O O3D NAP . . . B 2 -16.938 3.412 3.156 1 29.87 ? O3D NAP 201 A 1 HETATM 33 C C2D NAP . . . B 2 -16.033 5.565 2.708 1 29.82 ? C2D NAP 201 A 1 HETATM 34 O O2D NAP . . . B 2 -15.029 4.858 1.958 1 30.98 ? O2D NAP 201 A 1 HETATM 35 C C1D NAP . . . B 2 -17.247 5.983 1.889 1 29.23 ? C1D NAP 201 A 1 HETATM 36 N N1N NAP . . . B 2 -17.195 7.302 1.242 1 27.86 ? N1N NAP 201 A 1 HETATM 37 C C2N NAP . . . B 2 -17.223 7.359 -0.096 1 26.75 ? C2N NAP 201 A 1 HETATM 38 C C3N NAP . . . B 2 -17.206 8.569 -0.776 1 26.58 ? C3N NAP 201 A 1 HETATM 39 C C7N NAP . . . B 2 -17.252 8.563 -2.278 1 26.97 ? C7N NAP 201 A 1 HETATM 40 O O7N NAP . . . B 2 -17.414 7.529 -2.933 1 28.8 ? O7N NAP 201 A 1 HETATM 41 N N7N NAP . . . B 2 -17.137 9.701 -2.9 1 24.03 ? N7N NAP 201 A 1 HETATM 42 C C4N NAP . . . B 2 -17.174 9.741 -0.026 1 26.41 ? C4N NAP 201 A 1 HETATM 43 C C5N NAP . . . B 2 -17.149 9.671 1.362 1 26.84 ? C5N NAP 201 A 1 HETATM 44 C C6N NAP . . . B 2 -17.169 8.427 1.984 1 27.68 ? C6N NAP 201 A 1 HETATM 45 P P2B NAP . . . B 2 -19.397 10.495 15.779 1 40.4 ? P2B NAP 201 A 1 HETATM 46 O O1X NAP . . . B 2 -20.218 11.707 16.171 1 40.69 ? O1X NAP 201 A 1 HETATM 47 O O2X NAP . . . B 2 -20.108 9.173 15.889 1 39.66 ? O2X NAP 201 A 1 HETATM 48 O O3X NAP . . . B 2 -18.001 10.435 16.319 1 37.06 ? O3X NAP 201 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 48 #