data_7ESZ # _model_server_result.job_id o4LJmXOsAwWy68zQ0g6d1w _model_server_result.datetime_utc '2024-10-10 17:16:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7esz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 7ESZ # _exptl.entry_id 7ESZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 110.06 _cell.angle_beta 91.86 _cell.angle_gamma 115.38 _cell.entry_id 7ESZ _cell.length_a 85.466 _cell.length_b 86.38 _cell.length_c 93.018 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ESZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 223 A GLU 223 1_555 E MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc2 A OD2 ASP 257 A ASP 257 1_555 E MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc3 A OE2 GLU 277 A GLU 277 1_555 E MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 A O LEU 278 A LEU 278 1_555 E MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc5 E MN MN . A MN 801 1_555 G O HOH . A HOH 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc6 E MN MN . A MN 801 1_555 G O HOH . A HOH 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc7 C OE1 GLU 223 C GLU 223 1_555 F MN MN . C MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc8 C OD2 ASP 257 C ASP 257 1_555 F MN MN . C MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc9 C OE1 GLU 277 C GLU 277 1_555 F MN MN . C MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc10 C O LEU 278 C LEU 278 1_555 F MN MN . C MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc11 F MN MN . C MN 801 1_555 I O HOH . C HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ESZ _atom_sites.fract_transf_matrix[1][1] 0.011701 _atom_sites.fract_transf_matrix[1][2] 0.00555 _atom_sites.fract_transf_matrix[1][3] 0.0028 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012813 _atom_sites.fract_transf_matrix[2][3] 0.005512 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011709 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MN A 1 801 801 MN MN . F 3 MN C 1 801 801 MN MN . G 4 HOH A 1 901 901 HOH HOH . G 4 HOH A 2 902 902 HOH HOH . G 4 HOH A 3 903 903 HOH HOH . G 4 HOH A 4 904 904 HOH HOH . G 4 HOH A 5 905 905 HOH HOH . G 4 HOH A 6 906 906 HOH HOH . G 4 HOH A 7 907 907 HOH HOH . G 4 HOH A 8 908 908 HOH HOH . G 4 HOH A 9 909 909 HOH HOH . G 4 HOH A 10 910 910 HOH HOH . G 4 HOH A 11 911 911 HOH HOH . G 4 HOH A 12 912 912 HOH HOH . G 4 HOH A 13 913 913 HOH HOH . G 4 HOH A 14 914 914 HOH HOH . G 4 HOH A 15 915 915 HOH HOH . G 4 HOH A 16 916 916 HOH HOH . G 4 HOH A 17 917 917 HOH HOH . G 4 HOH A 18 918 918 HOH HOH . G 4 HOH A 19 919 919 HOH HOH . G 4 HOH A 20 920 920 HOH HOH . G 4 HOH A 21 921 921 HOH HOH . G 4 HOH A 22 922 922 HOH HOH . G 4 HOH A 23 923 923 HOH HOH . G 4 HOH A 24 924 924 HOH HOH . G 4 HOH A 25 925 925 HOH HOH . G 4 HOH A 26 926 926 HOH HOH . G 4 HOH A 27 927 927 HOH HOH . G 4 HOH A 28 928 928 HOH HOH . G 4 HOH A 29 929 929 HOH HOH . G 4 HOH A 30 930 930 HOH HOH . G 4 HOH A 31 931 931 HOH HOH . G 4 HOH A 32 932 932 HOH HOH . G 4 HOH A 33 933 933 HOH HOH . G 4 HOH A 34 934 934 HOH HOH . G 4 HOH A 35 935 935 HOH HOH . H 4 HOH B 1 501 501 HOH HOH . H 4 HOH B 2 502 502 HOH HOH . H 4 HOH B 3 503 503 HOH HOH . H 4 HOH B 4 504 504 HOH HOH . H 4 HOH B 5 505 505 HOH HOH . H 4 HOH B 6 506 506 HOH HOH . H 4 HOH B 7 507 507 HOH HOH . H 4 HOH B 8 508 508 HOH HOH . H 4 HOH B 9 509 509 HOH HOH . H 4 HOH B 10 510 510 HOH HOH . H 4 HOH B 11 511 511 HOH HOH . H 4 HOH B 12 512 512 HOH HOH . H 4 HOH B 13 513 513 HOH HOH . H 4 HOH B 14 514 514 HOH HOH . H 4 HOH B 15 515 515 HOH HOH . H 4 HOH B 16 516 516 HOH HOH . H 4 HOH B 17 517 517 HOH HOH . H 4 HOH B 18 518 518 HOH HOH . H 4 HOH B 19 519 519 HOH HOH . H 4 HOH B 20 520 520 HOH HOH . H 4 HOH B 21 521 521 HOH HOH . H 4 HOH B 22 522 522 HOH HOH . H 4 HOH B 23 523 523 HOH HOH . H 4 HOH B 24 524 524 HOH HOH . H 4 HOH B 25 525 525 HOH HOH . H 4 HOH B 26 526 526 HOH HOH . H 4 HOH B 27 527 527 HOH HOH . H 4 HOH B 28 528 528 HOH HOH . H 4 HOH B 29 529 529 HOH HOH . H 4 HOH B 30 530 530 HOH HOH . H 4 HOH B 31 531 531 HOH HOH . I 4 HOH C 1 901 901 HOH HOH . I 4 HOH C 2 902 902 HOH HOH . I 4 HOH C 3 903 903 HOH HOH . I 4 HOH C 4 904 904 HOH HOH . I 4 HOH C 5 905 905 HOH HOH . I 4 HOH C 6 906 906 HOH HOH . I 4 HOH C 7 907 907 HOH HOH . I 4 HOH C 8 908 908 HOH HOH . I 4 HOH C 9 909 909 HOH HOH . I 4 HOH C 10 910 910 HOH HOH . I 4 HOH C 11 911 911 HOH HOH . I 4 HOH C 12 912 912 HOH HOH . I 4 HOH C 13 913 913 HOH HOH . I 4 HOH C 14 914 914 HOH HOH . I 4 HOH C 15 915 915 HOH HOH . I 4 HOH C 16 916 916 HOH HOH . I 4 HOH C 17 917 917 HOH HOH . J 4 HOH D 1 501 501 HOH HOH . J 4 HOH D 2 502 502 HOH HOH . J 4 HOH D 3 503 503 HOH HOH . J 4 HOH D 4 504 504 HOH HOH . J 4 HOH D 5 505 505 HOH HOH . J 4 HOH D 6 506 506 HOH HOH . J 4 HOH D 7 507 507 HOH HOH . J 4 HOH D 8 508 508 HOH HOH . J 4 HOH D 9 509 509 HOH HOH . J 4 HOH D 10 510 510 HOH HOH . J 4 HOH D 11 511 511 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 34.771 _atom_site.Cartn_y 11.2 _atom_site.Cartn_z 51.9 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 801 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #