data_7ETX # _model_server_result.job_id PCVwVCGWpGjLej2wwdQnmA _model_server_result.datetime_utc '2024-11-26 05:56:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7etx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7ETX # _exptl.entry_id 7ETX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ETX _cell.length_a 90.681 _cell.length_b 90.681 _cell.length_c 141.785 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ETX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 94 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 94 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 119 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 119 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.4 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7ETX _atom_sites.fract_transf_matrix[1][1] 0.011028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 503 GOL GOL . C 2 GOL A 1 502 504 GOL GOL . D 3 HOH A 1 601 79 HOH HOH . D 3 HOH A 2 602 214 HOH HOH . D 3 HOH A 3 603 243 HOH HOH . D 3 HOH A 4 604 106 HOH HOH . D 3 HOH A 5 605 230 HOH HOH . D 3 HOH A 6 606 85 HOH HOH . D 3 HOH A 7 607 99 HOH HOH . D 3 HOH A 8 608 24 HOH HOH . D 3 HOH A 9 609 176 HOH HOH . D 3 HOH A 10 610 68 HOH HOH . D 3 HOH A 11 611 175 HOH HOH . D 3 HOH A 12 612 239 HOH HOH . D 3 HOH A 13 613 220 HOH HOH . D 3 HOH A 14 614 179 HOH HOH . D 3 HOH A 15 615 9 HOH HOH . D 3 HOH A 16 616 112 HOH HOH . D 3 HOH A 17 617 27 HOH HOH . D 3 HOH A 18 618 237 HOH HOH . D 3 HOH A 19 619 233 HOH HOH . D 3 HOH A 20 620 242 HOH HOH . D 3 HOH A 21 621 36 HOH HOH . D 3 HOH A 22 622 77 HOH HOH . D 3 HOH A 23 623 96 HOH HOH . D 3 HOH A 24 624 34 HOH HOH . D 3 HOH A 25 625 183 HOH HOH . D 3 HOH A 26 626 120 HOH HOH . D 3 HOH A 27 627 72 HOH HOH . D 3 HOH A 28 628 42 HOH HOH . D 3 HOH A 29 629 217 HOH HOH . D 3 HOH A 30 630 32 HOH HOH . D 3 HOH A 31 631 52 HOH HOH . D 3 HOH A 32 632 151 HOH HOH . D 3 HOH A 33 633 136 HOH HOH . D 3 HOH A 34 634 202 HOH HOH . D 3 HOH A 35 635 244 HOH HOH . D 3 HOH A 36 636 88 HOH HOH . D 3 HOH A 37 637 122 HOH HOH . D 3 HOH A 38 638 205 HOH HOH . D 3 HOH A 39 639 57 HOH HOH . D 3 HOH A 40 640 30 HOH HOH . D 3 HOH A 41 641 162 HOH HOH . D 3 HOH A 42 642 37 HOH HOH . D 3 HOH A 43 643 38 HOH HOH . D 3 HOH A 44 644 69 HOH HOH . D 3 HOH A 45 645 116 HOH HOH . D 3 HOH A 46 646 81 HOH HOH . D 3 HOH A 47 647 100 HOH HOH . D 3 HOH A 48 648 159 HOH HOH . D 3 HOH A 49 649 172 HOH HOH . D 3 HOH A 50 650 210 HOH HOH . D 3 HOH A 51 651 232 HOH HOH . D 3 HOH A 52 652 31 HOH HOH . D 3 HOH A 53 653 91 HOH HOH . D 3 HOH A 54 654 54 HOH HOH . D 3 HOH A 55 655 155 HOH HOH . D 3 HOH A 56 656 5 HOH HOH . D 3 HOH A 57 657 206 HOH HOH . D 3 HOH A 58 658 114 HOH HOH . D 3 HOH A 59 659 94 HOH HOH . D 3 HOH A 60 660 55 HOH HOH . D 3 HOH A 61 661 129 HOH HOH . D 3 HOH A 62 662 218 HOH HOH . D 3 HOH A 63 663 201 HOH HOH . D 3 HOH A 64 664 58 HOH HOH . D 3 HOH A 65 665 107 HOH HOH . D 3 HOH A 66 666 66 HOH HOH . D 3 HOH A 67 667 44 HOH HOH . D 3 HOH A 68 668 180 HOH HOH . D 3 HOH A 69 669 64 HOH HOH . D 3 HOH A 70 670 160 HOH HOH . D 3 HOH A 71 671 215 HOH HOH . D 3 HOH A 72 672 115 HOH HOH . D 3 HOH A 73 673 8 HOH HOH . D 3 HOH A 74 674 14 HOH HOH . D 3 HOH A 75 675 23 HOH HOH . D 3 HOH A 76 676 98 HOH HOH . D 3 HOH A 77 677 74 HOH HOH . D 3 HOH A 78 678 184 HOH HOH . D 3 HOH A 79 679 20 HOH HOH . D 3 HOH A 80 680 124 HOH HOH . D 3 HOH A 81 681 59 HOH HOH . D 3 HOH A 82 682 71 HOH HOH . D 3 HOH A 83 683 143 HOH HOH . D 3 HOH A 84 684 147 HOH HOH . D 3 HOH A 85 685 219 HOH HOH . D 3 HOH A 86 686 145 HOH HOH . D 3 HOH A 87 687 70 HOH HOH . D 3 HOH A 88 688 29 HOH HOH . D 3 HOH A 89 689 35 HOH HOH . D 3 HOH A 90 690 56 HOH HOH . D 3 HOH A 91 691 73 HOH HOH . D 3 HOH A 92 692 4 HOH HOH . D 3 HOH A 93 693 61 HOH HOH . D 3 HOH A 94 694 78 HOH HOH . D 3 HOH A 95 695 148 HOH HOH . D 3 HOH A 96 696 11 HOH HOH . D 3 HOH A 97 697 63 HOH HOH . D 3 HOH A 98 698 26 HOH HOH . D 3 HOH A 99 699 39 HOH HOH . D 3 HOH A 100 700 181 HOH HOH . D 3 HOH A 101 701 228 HOH HOH . D 3 HOH A 102 702 156 HOH HOH . D 3 HOH A 103 703 144 HOH HOH . D 3 HOH A 104 704 51 HOH HOH . D 3 HOH A 105 705 216 HOH HOH . D 3 HOH A 106 706 76 HOH HOH . D 3 HOH A 107 707 174 HOH HOH . D 3 HOH A 108 708 10 HOH HOH . D 3 HOH A 109 709 60 HOH HOH . D 3 HOH A 110 710 6 HOH HOH . D 3 HOH A 111 711 128 HOH HOH . D 3 HOH A 112 712 193 HOH HOH . D 3 HOH A 113 713 93 HOH HOH . D 3 HOH A 114 714 33 HOH HOH . D 3 HOH A 115 715 43 HOH HOH . D 3 HOH A 116 716 238 HOH HOH . D 3 HOH A 117 717 208 HOH HOH . D 3 HOH A 118 718 146 HOH HOH . D 3 HOH A 119 719 49 HOH HOH . D 3 HOH A 120 720 50 HOH HOH . D 3 HOH A 121 721 92 HOH HOH . D 3 HOH A 122 722 41 HOH HOH . D 3 HOH A 123 723 182 HOH HOH . D 3 HOH A 124 724 131 HOH HOH . D 3 HOH A 125 725 95 HOH HOH . D 3 HOH A 126 726 40 HOH HOH . D 3 HOH A 127 727 16 HOH HOH . D 3 HOH A 128 728 104 HOH HOH . D 3 HOH A 129 729 19 HOH HOH . D 3 HOH A 130 730 75 HOH HOH . D 3 HOH A 131 731 119 HOH HOH . D 3 HOH A 132 732 12 HOH HOH . D 3 HOH A 133 733 62 HOH HOH . D 3 HOH A 134 734 132 HOH HOH . D 3 HOH A 135 735 18 HOH HOH . D 3 HOH A 136 736 13 HOH HOH . D 3 HOH A 137 737 127 HOH HOH . D 3 HOH A 138 738 109 HOH HOH . D 3 HOH A 139 739 135 HOH HOH . D 3 HOH A 140 740 226 HOH HOH . D 3 HOH A 141 741 121 HOH HOH . D 3 HOH A 142 742 82 HOH HOH . D 3 HOH A 143 743 25 HOH HOH . D 3 HOH A 144 744 46 HOH HOH . D 3 HOH A 145 745 67 HOH HOH . D 3 HOH A 146 746 48 HOH HOH . D 3 HOH A 147 747 83 HOH HOH . D 3 HOH A 148 748 15 HOH HOH . D 3 HOH A 149 749 110 HOH HOH . D 3 HOH A 150 750 111 HOH HOH . D 3 HOH A 151 751 139 HOH HOH . D 3 HOH A 152 752 1 HOH HOH . D 3 HOH A 153 753 231 HOH HOH . D 3 HOH A 154 754 22 HOH HOH . D 3 HOH A 155 755 195 HOH HOH . D 3 HOH A 156 756 186 HOH HOH . D 3 HOH A 157 757 118 HOH HOH . D 3 HOH A 158 758 86 HOH HOH . D 3 HOH A 159 759 234 HOH HOH . D 3 HOH A 160 760 87 HOH HOH . D 3 HOH A 161 761 84 HOH HOH . D 3 HOH A 162 762 222 HOH HOH . D 3 HOH A 163 763 158 HOH HOH . D 3 HOH A 164 764 196 HOH HOH . D 3 HOH A 165 765 170 HOH HOH . D 3 HOH A 166 766 167 HOH HOH . D 3 HOH A 167 767 161 HOH HOH . D 3 HOH A 168 768 149 HOH HOH . D 3 HOH A 169 769 178 HOH HOH . D 3 HOH A 170 770 171 HOH HOH . D 3 HOH A 171 771 166 HOH HOH . D 3 HOH A 172 772 203 HOH HOH . D 3 HOH A 173 773 130 HOH HOH . D 3 HOH A 174 774 17 HOH HOH . D 3 HOH A 175 775 194 HOH HOH . D 3 HOH A 176 776 65 HOH HOH . D 3 HOH A 177 777 192 HOH HOH . D 3 HOH A 178 778 28 HOH HOH . D 3 HOH A 179 779 138 HOH HOH . D 3 HOH A 180 780 169 HOH HOH . D 3 HOH A 181 781 153 HOH HOH . D 3 HOH A 182 782 236 HOH HOH . D 3 HOH A 183 783 141 HOH HOH . D 3 HOH A 184 784 165 HOH HOH . D 3 HOH A 185 785 168 HOH HOH . D 3 HOH A 186 786 142 HOH HOH . D 3 HOH A 187 787 140 HOH HOH . D 3 HOH A 188 788 2 HOH HOH . D 3 HOH A 189 789 90 HOH HOH . D 3 HOH A 190 790 152 HOH HOH . D 3 HOH A 191 791 123 HOH HOH . D 3 HOH A 192 792 198 HOH HOH . D 3 HOH A 193 793 240 HOH HOH . D 3 HOH A 194 794 97 HOH HOH . D 3 HOH A 195 795 199 HOH HOH . D 3 HOH A 196 796 157 HOH HOH . D 3 HOH A 197 797 150 HOH HOH . D 3 HOH A 198 798 103 HOH HOH . D 3 HOH A 199 799 212 HOH HOH . D 3 HOH A 200 800 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 3.924 9.568 12.428 1 50.46 ? C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . B 2 4.047 9.987 13.784 1 55.23 ? O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . B 2 5.132 9.96 11.596 1 50.26 ? C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . B 2 6.339 9.898 12.364 1 45.75 ? O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . B 2 5.276 9.097 10.36 1 50.63 ? C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . B 2 5.416 7.713 10.689 1 48.87 ? O3 GOL 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #