data_7EVM # _model_server_result.job_id 6dNLsxNJAt4GPQLEDWj0mQ _model_server_result.datetime_utc '2024-11-21 14:00:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7evm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":507}' # _entry.id 7EVM # _exptl.entry_id 7EVM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7EVM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EVM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 24 N CYS 22 1_555 D SG CYS 98 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 D SG CYS 101 N CYS 99 1_555 D SG CYS 109 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 E SG CYS 203 R CYS 226 1_555 E SG CYS 273 R CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale1 E SG CYS 324 R CYS 347 1_555 F C12 HNO . R HNO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7EVM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 HNO R 1 501 501 HNO HNO . G 7 CLR R 1 502 502 CLR CLR . H 7 CLR R 1 503 503 CLR CLR . I 7 CLR R 1 504 504 CLR CLR . J 7 CLR R 1 505 505 CLR CLR . K 7 CLR R 1 506 506 CLR CLR . L 7 CLR R 1 507 507 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . L 7 152.081 136.126 132.307 1 30 ? C1 CLR 507 R 1 HETATM 2 C C2 CLR . . . L 7 151.647 135.742 130.909 1 30 ? C2 CLR 507 R 1 HETATM 3 C C3 CLR . . . L 7 152.254 134.404 130.554 1 30 ? C3 CLR 507 R 1 HETATM 4 C C4 CLR . . . L 7 151.662 133.362 131.464 1 30 ? C4 CLR 507 R 1 HETATM 5 C C5 CLR . . . L 7 151.936 133.703 132.884 1 30 ? C5 CLR 507 R 1 HETATM 6 C C6 CLR . . . L 7 152.236 132.698 133.681 1 30 ? C6 CLR 507 R 1 HETATM 7 C C7 CLR . . . L 7 153.008 132.917 134.895 1 30 ? C7 CLR 507 R 1 HETATM 8 C C8 CLR . . . L 7 152.393 134.094 135.629 1 30 ? C8 CLR 507 R 1 HETATM 9 C C9 CLR . . . L 7 152.445 135.347 134.723 1 30 ? C9 CLR 507 R 1 HETATM 10 C C10 CLR . . . L 7 151.635 135.091 133.376 1 30 ? C10 CLR 507 R 1 HETATM 11 C C11 CLR . . . L 7 152.027 136.638 135.466 1 30 ? C11 CLR 507 R 1 HETATM 12 C C12 CLR . . . L 7 152.769 136.846 136.769 1 30 ? C12 CLR 507 R 1 HETATM 13 C C13 CLR . . . L 7 152.614 135.645 137.702 1 30 ? C13 CLR 507 R 1 HETATM 14 C C14 CLR . . . L 7 153.161 134.39 136.92 1 30 ? C14 CLR 507 R 1 HETATM 15 C C15 CLR . . . L 7 153.19 133.301 137.984 1 30 ? C15 CLR 507 R 1 HETATM 16 C C16 CLR . . . L 7 153.68 134.039 139.216 1 30 ? C16 CLR 507 R 1 HETATM 17 C C17 CLR . . . L 7 153.572 135.579 138.945 1 30 ? C17 CLR 507 R 1 HETATM 18 C C18 CLR . . . L 7 151.092 135.466 138.15 1 30 ? C18 CLR 507 R 1 HETATM 19 C C19 CLR . . . L 7 150.096 135.179 133.593 1 30 ? C19 CLR 507 R 1 HETATM 20 C C20 CLR . . . L 7 153.156 136.369 140.24 1 30 ? C20 CLR 507 R 1 HETATM 21 C C21 CLR . . . L 7 152.877 137.842 139.973 1 30 ? C21 CLR 507 R 1 HETATM 22 C C22 CLR . . . L 7 154.254 136.276 141.334 1 30 ? C22 CLR 507 R 1 HETATM 23 C C23 CLR . . . L 7 153.623 136.162 142.729 1 30 ? C23 CLR 507 R 1 HETATM 24 C C24 CLR . . . L 7 153.294 134.691 143.119 1 30 ? C24 CLR 507 R 1 HETATM 25 C C25 CLR . . . L 7 154.493 133.749 143.552 1 30 ? C25 CLR 507 R 1 HETATM 26 C C26 CLR . . . L 7 154.894 132.802 142.423 1 30 ? C26 CLR 507 R 1 HETATM 27 C C27 CLR . . . L 7 155.737 134.467 144.081 1 30 ? C27 CLR 507 R 1 HETATM 28 O O1 CLR . . . L 7 151.898 134.136 129.239 1 30 ? O1 CLR 507 R 1 HETATM 29 H H11 CLR . . . L 7 153.036 136.254 132.328 1 30 ? H11 CLR 507 R 1 HETATM 30 H H12 CLR . . . L 7 151.747 137.003 132.515 1 30 ? H12 CLR 507 R 1 HETATM 31 H H21 CLR . . . L 7 151.904 136.416 130.269 1 30 ? H21 CLR 507 R 1 HETATM 32 H H22 CLR . . . L 7 150.685 135.71 130.835 1 30 ? H22 CLR 507 R 1 HETATM 33 H H3 CLR . . . L 7 153.217 134.427 130.661 1 30 ? H3 CLR 507 R 1 HETATM 34 H H41 CLR . . . L 7 152.031 132.496 131.254 1 30 ? H41 CLR 507 R 1 HETATM 35 H H42 CLR . . . L 7 150.718 133.246 131.311 1 30 ? H42 CLR 507 R 1 HETATM 36 H H6 CLR . . . L 7 151.707 131.937 133.696 1 30 ? H6 CLR 507 R 1 HETATM 37 H H71 CLR . . . L 7 153.934 133.07 134.665 1 30 ? H71 CLR 507 R 1 HETATM 38 H H72 CLR . . . L 7 152.996 132.12 135.429 1 30 ? H72 CLR 507 R 1 HETATM 39 H H8 CLR . . . L 7 151.501 133.847 135.815 1 30 ? H8 CLR 507 R 1 HETATM 40 H H9 CLR . . . L 7 153.372 135.474 134.504 1 30 ? H9 CLR 507 R 1 HETATM 41 H H111 CLR . . . L 7 152.163 137.401 134.905 1 30 ? H111 CLR 507 R 1 HETATM 42 H H112 CLR . . . L 7 151.097 136.687 135.655 1 30 ? H112 CLR 507 R 1 HETATM 43 H H121 CLR . . . L 7 153.697 137.045 136.596 1 30 ? H121 CLR 507 R 1 HETATM 44 H H122 CLR . . . L 7 152.443 137.642 137.169 1 30 ? H122 CLR 507 R 1 HETATM 45 H H14 CLR . . . L 7 154.079 134.545 136.672 1 30 ? H14 CLR 507 R 1 HETATM 46 H H151 CLR . . . L 7 153.759 132.558 137.758 1 30 ? H151 CLR 507 R 1 HETATM 47 H H152 CLR . . . L 7 152.323 132.899 138.118 1 30 ? H152 CLR 507 R 1 HETATM 48 H H161 CLR . . . L 7 154.588 133.797 139.415 1 30 ? H161 CLR 507 R 1 HETATM 49 H H162 CLR . . . L 7 153.188 133.758 139.991 1 30 ? H162 CLR 507 R 1 HETATM 50 H H17 CLR . . . L 7 154.444 135.903 138.687 1 30 ? H17 CLR 507 R 1 HETATM 51 H H181 CLR . . . L 7 150.515 135.096 137.491 1 30 ? H181 CLR 507 R 1 HETATM 52 H H182 CLR . . . L 7 150.979 134.894 138.912 1 30 ? H182 CLR 507 R 1 HETATM 53 H H183 CLR . . . L 7 150.667 136.301 138.362 1 30 ? H183 CLR 507 R 1 HETATM 54 H H191 CLR . . . L 7 149.581 134.683 132.956 1 30 ? H191 CLR 507 R 1 HETATM 55 H H192 CLR . . . L 7 149.815 134.855 134.452 1 30 ? H192 CLR 507 R 1 HETATM 56 H H193 CLR . . . L 7 149.769 136.083 133.522 1 30 ? H193 CLR 507 R 1 HETATM 57 H H20 CLR . . . L 7 152.371 135.975 140.614 1 30 ? H20 CLR 507 R 1 HETATM 58 H H211 CLR . . . L 7 153.525 138.236 139.375 1 30 ? H211 CLR 507 R 1 HETATM 59 H H212 CLR . . . L 7 152.01 137.995 139.59 1 30 ? H212 CLR 507 R 1 HETATM 60 H H213 CLR . . . L 7 152.88 138.369 140.781 1 30 ? H213 CLR 507 R 1 HETATM 61 H H221 CLR . . . L 7 154.839 137.04 141.285 1 30 ? H221 CLR 507 R 1 HETATM 62 H H222 CLR . . . L 7 154.841 135.555 141.188 1 30 ? H222 CLR 507 R 1 HETATM 63 H H231 CLR . . . L 7 152.826 136.705 142.796 1 30 ? H231 CLR 507 R 1 HETATM 64 H H232 CLR . . . L 7 154.179 136.588 143.377 1 30 ? H232 CLR 507 R 1 HETATM 65 H H241 CLR . . . L 7 152.799 134.287 142.403 1 30 ? H241 CLR 507 R 1 HETATM 66 H H242 CLR . . . L 7 152.648 134.705 143.833 1 30 ? H242 CLR 507 R 1 HETATM 67 H H25 CLR . . . L 7 154.162 133.204 144.278 1 30 ? H25 CLR 507 R 1 HETATM 68 H H261 CLR . . . L 7 155.469 132.095 142.74 1 30 ? H261 CLR 507 R 1 HETATM 69 H H262 CLR . . . L 7 154.137 132.371 142.004 1 30 ? H262 CLR 507 R 1 HETATM 70 H H263 CLR . . . L 7 155.377 133.249 141.725 1 30 ? H263 CLR 507 R 1 HETATM 71 H H271 CLR . . . L 7 156.195 134.981 143.399 1 30 ? H271 CLR 507 R 1 HETATM 72 H H272 CLR . . . L 7 155.525 135.084 144.795 1 30 ? H272 CLR 507 R 1 HETATM 73 H H273 CLR . . . L 7 156.382 133.848 144.446 1 30 ? H273 CLR 507 R 1 HETATM 74 H H1 CLR . . . L 7 152.496 133.63 128.921 1 30 ? H1 CLR 507 R 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 74 #