data_7EVV
#
_model_server_result.job_id            2vvVCCg5Zc5v11Xv7pIDBw 
_model_server_result.datetime_utc      '2024-11-22 10:25:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7evv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":905}' 
#
_entry.id    7EVV 
#
_exptl.entry_id    7EVV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.74 
_cell.angle_gamma         90 
_cell.entry_id            7EVV 
_cell.length_a            111.35 
_cell.length_b            75.2 
_cell.length_c            74.74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7EVV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 290 n n 
C1 H11 MPD sing 291 n n 
C1 H12 MPD sing 292 n n 
C1 H13 MPD sing 293 n n 
C2 O2 MPD sing 294 n n 
C2 CM MPD sing 295 n n 
C2 C3 MPD sing 296 n n 
O2 HO2 MPD sing 297 n n 
CM HM1 MPD sing 298 n n 
CM HM2 MPD sing 299 n n 
CM HM3 MPD sing 300 n n 
C3 C4 MPD sing 301 n n 
C3 H31 MPD sing 302 n n 
C3 H32 MPD sing 303 n n 
C4 O4 MPD sing 304 n n 
C4 C5 MPD sing 305 n n 
C4 H4 MPD sing 306 n n 
O4 HO4 MPD sing 307 n n 
C5 H51 MPD sing 308 n n 
C5 H52 MPD sing 309 n n 
C5 H53 MPD sing 310 n n 
#
_atom_sites.entry_id                     7EVV 
_atom_sites.fract_transf_matrix[1][1]    0.008981 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003401 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013298 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014307 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 JE6 A 1 901 901 JE6 L95 . 
C 3 PRO A 1 902 1001 PRO PRO . 
D 4 CL A 1 903 1101 CL CL . 
E 5 MPD A 1 904 1201 MPD MPD . 
F 5 MPD A 1 905 1202 MPD MPD . 
G 6 HOH A 1 1001 287 HOH HOH . 
G 6 HOH A 2 1002 209 HOH HOH . 
G 6 HOH A 3 1003 37 HOH HOH . 
G 6 HOH A 4 1004 241 HOH HOH . 
G 6 HOH A 5 1005 286 HOH HOH . 
G 6 HOH A 6 1006 225 HOH HOH . 
G 6 HOH A 7 1007 91 HOH HOH . 
G 6 HOH A 8 1008 110 HOH HOH . 
G 6 HOH A 9 1009 161 HOH HOH . 
G 6 HOH A 10 1010 273 HOH HOH . 
G 6 HOH A 11 1011 279 HOH HOH . 
G 6 HOH A 12 1012 124 HOH HOH . 
G 6 HOH A 13 1013 14 HOH HOH . 
G 6 HOH A 14 1014 122 HOH HOH . 
G 6 HOH A 15 1015 136 HOH HOH . 
G 6 HOH A 16 1016 203 HOH HOH . 
G 6 HOH A 17 1017 212 HOH HOH . 
G 6 HOH A 18 1018 238 HOH HOH . 
G 6 HOH A 19 1019 24 HOH HOH . 
G 6 HOH A 20 1020 49 HOH HOH . 
G 6 HOH A 21 1021 108 HOH HOH . 
G 6 HOH A 22 1022 51 HOH HOH . 
G 6 HOH A 23 1023 76 HOH HOH . 
G 6 HOH A 24 1024 204 HOH HOH . 
G 6 HOH A 25 1025 85 HOH HOH . 
G 6 HOH A 26 1026 32 HOH HOH . 
G 6 HOH A 27 1027 5 HOH HOH . 
G 6 HOH A 28 1028 216 HOH HOH . 
G 6 HOH A 29 1029 72 HOH HOH . 
G 6 HOH A 30 1030 53 HOH HOH . 
G 6 HOH A 31 1031 142 HOH HOH . 
G 6 HOH A 32 1032 46 HOH HOH . 
G 6 HOH A 33 1033 47 HOH HOH . 
G 6 HOH A 34 1034 245 HOH HOH . 
G 6 HOH A 35 1035 269 HOH HOH . 
G 6 HOH A 36 1036 8 HOH HOH . 
G 6 HOH A 37 1037 97 HOH HOH . 
G 6 HOH A 38 1038 252 HOH HOH . 
G 6 HOH A 39 1039 10 HOH HOH . 
G 6 HOH A 40 1040 160 HOH HOH . 
G 6 HOH A 41 1041 33 HOH HOH . 
G 6 HOH A 42 1042 71 HOH HOH . 
G 6 HOH A 43 1043 183 HOH HOH . 
G 6 HOH A 44 1044 206 HOH HOH . 
G 6 HOH A 45 1045 82 HOH HOH . 
G 6 HOH A 46 1046 127 HOH HOH . 
G 6 HOH A 47 1047 109 HOH HOH . 
G 6 HOH A 48 1048 235 HOH HOH . 
G 6 HOH A 49 1049 43 HOH HOH . 
G 6 HOH A 50 1050 106 HOH HOH . 
G 6 HOH A 51 1051 26 HOH HOH . 
G 6 HOH A 52 1052 134 HOH HOH . 
G 6 HOH A 53 1053 105 HOH HOH . 
G 6 HOH A 54 1054 17 HOH HOH . 
G 6 HOH A 55 1055 102 HOH HOH . 
G 6 HOH A 56 1056 285 HOH HOH . 
G 6 HOH A 57 1057 121 HOH HOH . 
G 6 HOH A 58 1058 188 HOH HOH . 
G 6 HOH A 59 1059 81 HOH HOH . 
G 6 HOH A 60 1060 220 HOH HOH . 
G 6 HOH A 61 1061 158 HOH HOH . 
G 6 HOH A 62 1062 54 HOH HOH . 
G 6 HOH A 63 1063 111 HOH HOH . 
G 6 HOH A 64 1064 150 HOH HOH . 
G 6 HOH A 65 1065 137 HOH HOH . 
G 6 HOH A 66 1066 164 HOH HOH . 
G 6 HOH A 67 1067 56 HOH HOH . 
G 6 HOH A 68 1068 157 HOH HOH . 
G 6 HOH A 69 1069 70 HOH HOH . 
G 6 HOH A 70 1070 211 HOH HOH . 
G 6 HOH A 71 1071 3 HOH HOH . 
G 6 HOH A 72 1072 118 HOH HOH . 
G 6 HOH A 73 1073 41 HOH HOH . 
G 6 HOH A 74 1074 114 HOH HOH . 
G 6 HOH A 75 1075 31 HOH HOH . 
G 6 HOH A 76 1076 231 HOH HOH . 
G 6 HOH A 77 1077 277 HOH HOH . 
G 6 HOH A 78 1078 95 HOH HOH . 
G 6 HOH A 79 1079 162 HOH HOH . 
G 6 HOH A 80 1080 257 HOH HOH . 
G 6 HOH A 81 1081 39 HOH HOH . 
G 6 HOH A 82 1082 165 HOH HOH . 
G 6 HOH A 83 1083 281 HOH HOH . 
G 6 HOH A 84 1084 93 HOH HOH . 
G 6 HOH A 85 1085 19 HOH HOH . 
G 6 HOH A 86 1086 40 HOH HOH . 
G 6 HOH A 87 1087 75 HOH HOH . 
G 6 HOH A 88 1088 259 HOH HOH . 
G 6 HOH A 89 1089 4 HOH HOH . 
G 6 HOH A 90 1090 125 HOH HOH . 
G 6 HOH A 91 1091 237 HOH HOH . 
G 6 HOH A 92 1092 267 HOH HOH . 
G 6 HOH A 93 1093 190 HOH HOH . 
G 6 HOH A 94 1094 87 HOH HOH . 
G 6 HOH A 95 1095 178 HOH HOH . 
G 6 HOH A 96 1096 35 HOH HOH . 
G 6 HOH A 97 1097 1 HOH HOH . 
G 6 HOH A 98 1098 22 HOH HOH . 
G 6 HOH A 99 1099 187 HOH HOH . 
G 6 HOH A 100 1100 230 HOH HOH . 
G 6 HOH A 101 1101 96 HOH HOH . 
G 6 HOH A 102 1102 23 HOH HOH . 
G 6 HOH A 103 1103 6 HOH HOH . 
G 6 HOH A 104 1104 62 HOH HOH . 
G 6 HOH A 105 1105 29 HOH HOH . 
G 6 HOH A 106 1106 38 HOH HOH . 
G 6 HOH A 107 1107 283 HOH HOH . 
G 6 HOH A 108 1108 20 HOH HOH . 
G 6 HOH A 109 1109 140 HOH HOH . 
G 6 HOH A 110 1110 2 HOH HOH . 
G 6 HOH A 111 1111 139 HOH HOH . 
G 6 HOH A 112 1112 169 HOH HOH . 
G 6 HOH A 113 1113 261 HOH HOH . 
G 6 HOH A 114 1114 34 HOH HOH . 
G 6 HOH A 115 1115 253 HOH HOH . 
G 6 HOH A 116 1116 100 HOH HOH . 
G 6 HOH A 117 1117 42 HOH HOH . 
G 6 HOH A 118 1118 55 HOH HOH . 
G 6 HOH A 119 1119 21 HOH HOH . 
G 6 HOH A 120 1120 90 HOH HOH . 
G 6 HOH A 121 1121 229 HOH HOH . 
G 6 HOH A 122 1122 104 HOH HOH . 
G 6 HOH A 123 1123 15 HOH HOH . 
G 6 HOH A 124 1124 156 HOH HOH . 
G 6 HOH A 125 1125 59 HOH HOH . 
G 6 HOH A 126 1126 79 HOH HOH . 
G 6 HOH A 127 1127 92 HOH HOH . 
G 6 HOH A 128 1128 214 HOH HOH . 
G 6 HOH A 129 1129 48 HOH HOH . 
G 6 HOH A 130 1130 65 HOH HOH . 
G 6 HOH A 131 1131 275 HOH HOH . 
G 6 HOH A 132 1132 63 HOH HOH . 
G 6 HOH A 133 1133 246 HOH HOH . 
G 6 HOH A 134 1134 199 HOH HOH . 
G 6 HOH A 135 1135 144 HOH HOH . 
G 6 HOH A 136 1136 147 HOH HOH . 
G 6 HOH A 137 1137 88 HOH HOH . 
G 6 HOH A 138 1138 117 HOH HOH . 
G 6 HOH A 139 1139 145 HOH HOH . 
G 6 HOH A 140 1140 67 HOH HOH . 
G 6 HOH A 141 1141 254 HOH HOH . 
G 6 HOH A 142 1142 271 HOH HOH . 
G 6 HOH A 143 1143 98 HOH HOH . 
G 6 HOH A 144 1144 7 HOH HOH . 
G 6 HOH A 145 1145 36 HOH HOH . 
G 6 HOH A 146 1146 52 HOH HOH . 
G 6 HOH A 147 1147 123 HOH HOH . 
G 6 HOH A 148 1148 143 HOH HOH . 
G 6 HOH A 149 1149 13 HOH HOH . 
G 6 HOH A 150 1150 186 HOH HOH . 
G 6 HOH A 151 1151 113 HOH HOH . 
G 6 HOH A 152 1152 227 HOH HOH . 
G 6 HOH A 153 1153 282 HOH HOH . 
G 6 HOH A 154 1154 86 HOH HOH . 
G 6 HOH A 155 1155 58 HOH HOH . 
G 6 HOH A 156 1156 228 HOH HOH . 
G 6 HOH A 157 1157 66 HOH HOH . 
G 6 HOH A 158 1158 131 HOH HOH . 
G 6 HOH A 159 1159 89 HOH HOH . 
G 6 HOH A 160 1160 77 HOH HOH . 
G 6 HOH A 161 1161 73 HOH HOH . 
G 6 HOH A 162 1162 101 HOH HOH . 
G 6 HOH A 163 1163 200 HOH HOH . 
G 6 HOH A 164 1164 244 HOH HOH . 
G 6 HOH A 165 1165 152 HOH HOH . 
G 6 HOH A 166 1166 215 HOH HOH . 
G 6 HOH A 167 1167 116 HOH HOH . 
G 6 HOH A 168 1168 175 HOH HOH . 
G 6 HOH A 169 1169 78 HOH HOH . 
G 6 HOH A 170 1170 233 HOH HOH . 
G 6 HOH A 171 1171 174 HOH HOH . 
G 6 HOH A 172 1172 60 HOH HOH . 
G 6 HOH A 173 1173 166 HOH HOH . 
G 6 HOH A 174 1174 258 HOH HOH . 
G 6 HOH A 175 1175 107 HOH HOH . 
G 6 HOH A 176 1176 69 HOH HOH . 
G 6 HOH A 177 1177 27 HOH HOH . 
G 6 HOH A 178 1178 25 HOH HOH . 
G 6 HOH A 179 1179 50 HOH HOH . 
G 6 HOH A 180 1180 11 HOH HOH . 
G 6 HOH A 181 1181 218 HOH HOH . 
G 6 HOH A 182 1182 120 HOH HOH . 
G 6 HOH A 183 1183 272 HOH HOH . 
G 6 HOH A 184 1184 84 HOH HOH . 
G 6 HOH A 185 1185 151 HOH HOH . 
G 6 HOH A 186 1186 148 HOH HOH . 
G 6 HOH A 187 1187 119 HOH HOH . 
G 6 HOH A 188 1188 255 HOH HOH . 
G 6 HOH A 189 1189 74 HOH HOH . 
G 6 HOH A 190 1190 64 HOH HOH . 
G 6 HOH A 191 1191 12 HOH HOH . 
G 6 HOH A 192 1192 221 HOH HOH . 
G 6 HOH A 193 1193 83 HOH HOH . 
G 6 HOH A 194 1194 146 HOH HOH . 
G 6 HOH A 195 1195 153 HOH HOH . 
G 6 HOH A 196 1196 16 HOH HOH . 
G 6 HOH A 197 1197 198 HOH HOH . 
G 6 HOH A 198 1198 18 HOH HOH . 
G 6 HOH A 199 1199 133 HOH HOH . 
G 6 HOH A 200 1200 167 HOH HOH . 
G 6 HOH A 201 1201 239 HOH HOH . 
G 6 HOH A 202 1202 260 HOH HOH . 
G 6 HOH A 203 1203 45 HOH HOH . 
G 6 HOH A 204 1204 128 HOH HOH . 
G 6 HOH A 205 1205 256 HOH HOH . 
G 6 HOH A 206 1206 44 HOH HOH . 
G 6 HOH A 207 1207 112 HOH HOH . 
G 6 HOH A 208 1208 191 HOH HOH . 
G 6 HOH A 209 1209 202 HOH HOH . 
G 6 HOH A 210 1210 284 HOH HOH . 
G 6 HOH A 211 1211 68 HOH HOH . 
G 6 HOH A 212 1212 179 HOH HOH . 
G 6 HOH A 213 1213 30 HOH HOH . 
G 6 HOH A 214 1214 9 HOH HOH . 
G 6 HOH A 215 1215 28 HOH HOH . 
G 6 HOH A 216 1216 201 HOH HOH . 
G 6 HOH A 217 1217 163 HOH HOH . 
G 6 HOH A 218 1218 234 HOH HOH . 
G 6 HOH A 219 1219 264 HOH HOH . 
G 6 HOH A 220 1220 80 HOH HOH . 
G 6 HOH A 221 1221 248 HOH HOH . 
G 6 HOH A 222 1222 268 HOH HOH . 
G 6 HOH A 223 1223 181 HOH HOH . 
G 6 HOH A 224 1224 138 HOH HOH . 
G 6 HOH A 225 1225 280 HOH HOH . 
G 6 HOH A 226 1226 132 HOH HOH . 
G 6 HOH A 227 1227 197 HOH HOH . 
G 6 HOH A 228 1228 240 HOH HOH . 
G 6 HOH A 229 1229 262 HOH HOH . 
G 6 HOH A 230 1230 222 HOH HOH . 
G 6 HOH A 231 1231 205 HOH HOH . 
G 6 HOH A 232 1232 208 HOH HOH . 
G 6 HOH A 233 1233 173 HOH HOH . 
G 6 HOH A 234 1234 172 HOH HOH . 
G 6 HOH A 235 1235 159 HOH HOH . 
G 6 HOH A 236 1236 171 HOH HOH . 
G 6 HOH A 237 1237 129 HOH HOH . 
G 6 HOH A 238 1238 115 HOH HOH . 
G 6 HOH A 239 1239 185 HOH HOH . 
G 6 HOH A 240 1240 250 HOH HOH . 
G 6 HOH A 241 1241 249 HOH HOH . 
G 6 HOH A 242 1242 189 HOH HOH . 
G 6 HOH A 243 1243 194 HOH HOH . 
G 6 HOH A 244 1244 213 HOH HOH . 
G 6 HOH A 245 1245 223 HOH HOH . 
G 6 HOH A 246 1246 195 HOH HOH . 
G 6 HOH A 247 1247 210 HOH HOH . 
G 6 HOH A 248 1248 192 HOH HOH . 
G 6 HOH A 249 1249 94 HOH HOH . 
G 6 HOH A 250 1250 135 HOH HOH . 
G 6 HOH A 251 1251 176 HOH HOH . 
G 6 HOH A 252 1252 149 HOH HOH . 
G 6 HOH A 253 1253 224 HOH HOH . 
G 6 HOH A 254 1254 247 HOH HOH . 
G 6 HOH A 255 1255 182 HOH HOH . 
G 6 HOH A 256 1256 274 HOH HOH . 
G 6 HOH A 257 1257 278 HOH HOH . 
G 6 HOH A 258 1258 103 HOH HOH . 
G 6 HOH A 259 1259 130 HOH HOH . 
G 6 HOH A 260 1260 141 HOH HOH . 
G 6 HOH A 261 1261 57 HOH HOH . 
G 6 HOH A 262 1262 219 HOH HOH . 
G 6 HOH A 263 1263 193 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . F 5 30.238 -2.288 -10.923 1 42.86 ? C1 MPD 905 A 1 
HETATM 2 C C2 MPD . . . F 5 30.832 -1.777 -12.23 1 49.13 ? C2 MPD 905 A 1 
HETATM 3 O O2 MPD . . . F 5 31.672 -0.627 -11.926 1 56.67 ? O2 MPD 905 A 1 
HETATM 4 C CM MPD . . . F 5 31.701 -2.865 -12.829 1 42.71 ? CM MPD 905 A 1 
HETATM 5 C C3 MPD . . . F 5 29.757 -1.356 -13.228 1 44.81 ? C3 MPD 905 A 1 
HETATM 6 C C4 MPD . . . F 5 30.13 -0.041 -13.957 1 55.39 ? C4 MPD 905 A 1 
HETATM 7 O O4 MPD . . . F 5 31.533 0.174 -13.956 1 57.93 ? O4 MPD 905 A 1 
HETATM 8 C C5 MPD . . . F 5 29.634 0.058 -15.407 1 52.53 ? C5 MPD 905 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           353 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#