data_7EWB # _model_server_result.job_id 5fkYRGBTsmp1nUyS9qEJPg _model_server_result.datetime_utc '2024-11-08 16:44:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ewb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 7EWB # _exptl.entry_id 7EWB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.88 _cell.angle_gamma 90 _cell.entry_id 7EWB _cell.length_a 46.559 _cell.length_b 102.48 _cell.length_c 56.126 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EWB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,M 1 1 B,G,H,I,N 2 1 C,J,K,L,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc2 D MG MG . A MG 301 1_555 E O3B GDP . A GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc3 D MG MG . A MG 301 1_555 M O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 D MG MG . A MG 301 1_555 M O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc5 D MG MG . A MG 301 1_555 M O HOH . A HOH 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc6 D MG MG . A MG 301 1_555 M O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc7 B OG SER 18 B SER 17 1_555 G MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc8 G MG MG . B MG 201 1_555 I O2G GNP . B GNP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc9 G MG MG . B MG 201 1_555 I O2B GNP . B GNP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc10 G MG MG . B MG 201 1_555 N O HOH . B HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc11 G MG MG . B MG 201 1_555 N O HOH . B HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc12 G MG MG . B MG 201 1_555 N O HOH . B HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc13 C OG SER 18 C SER 17 1_555 J MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc14 J MG MG . C MG 201 1_555 L O1B GNP . C GNP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc15 J MG MG . C MG 201 1_555 L O1G GNP . C GNP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc16 J MG MG . C MG 201 1_555 O O HOH . C HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc17 J MG MG . C MG 201 1_555 O O HOH . C HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc18 J MG MG . C MG 201 1_555 O O HOH . C HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 164 n n PB O2B GDP sing 165 n n PB O3B GDP sing 166 n n PB O3A GDP sing 167 n n O2B HOB2 GDP sing 168 n n O3B HOB3 GDP sing 169 n n O3A PA GDP sing 170 n n PA O1A GDP doub 171 n n PA O2A GDP sing 172 n n PA O5' GDP sing 173 n n O2A HOA2 GDP sing 174 n n O5' C5' GDP sing 175 n n C5' C4' GDP sing 176 n n C5' H5' GDP sing 177 n n C5' "H5''" GDP sing 178 n n C4' O4' GDP sing 179 n n C4' C3' GDP sing 180 n n C4' H4' GDP sing 181 n n O4' C1' GDP sing 182 n n C3' O3' GDP sing 183 n n C3' C2' GDP sing 184 n n C3' H3' GDP sing 185 n n O3' HO3' GDP sing 186 n n C2' O2' GDP sing 187 n n C2' C1' GDP sing 188 n n C2' H2' GDP sing 189 n n O2' HO2' GDP sing 190 n n C1' N9 GDP sing 191 n n C1' H1' GDP sing 192 n n N9 C8 GDP sing 193 n y N9 C4 GDP sing 194 n y C8 N7 GDP doub 195 n y C8 H8 GDP sing 196 n n N7 C5 GDP sing 197 n y C5 C6 GDP sing 198 n n C5 C4 GDP doub 199 n y C6 O6 GDP doub 200 n n C6 N1 GDP sing 201 n n N1 C2 GDP sing 202 n n N1 HN1 GDP sing 203 n n C2 N2 GDP sing 204 n n C2 N3 GDP doub 205 n n N2 HN21 GDP sing 206 n n N2 HN22 GDP sing 207 n n N3 C4 GDP sing 208 n n # _atom_sites.entry_id 7EWB _atom_sites.fract_transf_matrix[1][1] 0.021478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006517 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 301 301 MG MG . E 3 GDP A 1 302 201 GDP GDP . F 4 05I A 1 303 300 05I DRG . G 2 MG B 1 201 1 MG MG . H 4 05I B 1 202 300 05I DRG . I 5 GNP B 1 203 200 GNP GNP . J 2 MG C 1 201 1 MG MG . K 4 05I C 1 202 300 05I DRG . L 5 GNP C 1 203 200 GNP GNP . M 6 HOH A 1 401 123 HOH HOH . M 6 HOH A 2 402 106 HOH HOH . M 6 HOH A 3 403 45 HOH HOH . M 6 HOH A 4 404 117 HOH HOH . M 6 HOH A 5 405 58 HOH HOH . M 6 HOH A 6 406 52 HOH HOH . M 6 HOH A 7 407 277 HOH HOH . M 6 HOH A 8 408 44 HOH HOH . M 6 HOH A 9 409 26 HOH HOH . M 6 HOH A 10 410 102 HOH HOH . M 6 HOH A 11 411 170 HOH HOH . M 6 HOH A 12 412 225 HOH HOH . M 6 HOH A 13 413 74 HOH HOH . M 6 HOH A 14 414 31 HOH HOH . M 6 HOH A 15 415 93 HOH HOH . M 6 HOH A 16 416 65 HOH HOH . M 6 HOH A 17 417 249 HOH HOH . M 6 HOH A 18 418 24 HOH HOH . M 6 HOH A 19 419 203 HOH HOH . M 6 HOH A 20 420 194 HOH HOH . M 6 HOH A 21 421 89 HOH HOH . M 6 HOH A 22 422 125 HOH HOH . M 6 HOH A 23 423 139 HOH HOH . M 6 HOH A 24 424 20 HOH HOH . M 6 HOH A 25 425 63 HOH HOH . M 6 HOH A 26 426 8 HOH HOH . M 6 HOH A 27 427 130 HOH HOH . M 6 HOH A 28 428 188 HOH HOH . M 6 HOH A 29 429 13 HOH HOH . M 6 HOH A 30 430 109 HOH HOH . M 6 HOH A 31 431 19 HOH HOH . M 6 HOH A 32 432 289 HOH HOH . M 6 HOH A 33 433 288 HOH HOH . M 6 HOH A 34 434 99 HOH HOH . M 6 HOH A 35 435 32 HOH HOH . M 6 HOH A 36 436 7 HOH HOH . M 6 HOH A 37 437 196 HOH HOH . M 6 HOH A 38 438 156 HOH HOH . M 6 HOH A 39 439 290 HOH HOH . M 6 HOH A 40 440 30 HOH HOH . M 6 HOH A 41 441 66 HOH HOH . M 6 HOH A 42 442 96 HOH HOH . M 6 HOH A 43 443 140 HOH HOH . M 6 HOH A 44 444 284 HOH HOH . M 6 HOH A 45 445 166 HOH HOH . M 6 HOH A 46 446 110 HOH HOH . M 6 HOH A 47 447 199 HOH HOH . M 6 HOH A 48 448 48 HOH HOH . M 6 HOH A 49 449 2 HOH HOH . M 6 HOH A 50 450 158 HOH HOH . M 6 HOH A 51 451 136 HOH HOH . M 6 HOH A 52 452 154 HOH HOH . M 6 HOH A 53 453 35 HOH HOH . M 6 HOH A 54 454 120 HOH HOH . M 6 HOH A 55 455 9 HOH HOH . M 6 HOH A 56 456 153 HOH HOH . M 6 HOH A 57 457 22 HOH HOH . M 6 HOH A 58 458 3 HOH HOH . M 6 HOH A 59 459 98 HOH HOH . M 6 HOH A 60 460 180 HOH HOH . M 6 HOH A 61 461 57 HOH HOH . M 6 HOH A 62 462 186 HOH HOH . M 6 HOH A 63 463 38 HOH HOH . M 6 HOH A 64 464 223 HOH HOH . M 6 HOH A 65 465 138 HOH HOH . M 6 HOH A 66 466 273 HOH HOH . M 6 HOH A 67 467 56 HOH HOH . M 6 HOH A 68 468 101 HOH HOH . M 6 HOH A 69 469 83 HOH HOH . M 6 HOH A 70 470 39 HOH HOH . M 6 HOH A 71 471 21 HOH HOH . M 6 HOH A 72 472 15 HOH HOH . M 6 HOH A 73 473 143 HOH HOH . M 6 HOH A 74 474 76 HOH HOH . M 6 HOH A 75 475 222 HOH HOH . M 6 HOH A 76 476 113 HOH HOH . M 6 HOH A 77 477 71 HOH HOH . M 6 HOH A 78 478 100 HOH HOH . M 6 HOH A 79 479 227 HOH HOH . M 6 HOH A 80 480 195 HOH HOH . M 6 HOH A 81 481 279 HOH HOH . M 6 HOH A 82 482 114 HOH HOH . M 6 HOH A 83 483 147 HOH HOH . M 6 HOH A 84 484 50 HOH HOH . M 6 HOH A 85 485 43 HOH HOH . M 6 HOH A 86 486 257 HOH HOH . M 6 HOH A 87 487 213 HOH HOH . M 6 HOH A 88 488 121 HOH HOH . M 6 HOH A 89 489 47 HOH HOH . M 6 HOH A 90 490 144 HOH HOH . M 6 HOH A 91 491 268 HOH HOH . M 6 HOH A 92 492 72 HOH HOH . M 6 HOH A 93 493 263 HOH HOH . M 6 HOH A 94 494 202 HOH HOH . M 6 HOH A 95 495 192 HOH HOH . M 6 HOH A 96 496 131 HOH HOH . M 6 HOH A 97 497 215 HOH HOH . M 6 HOH A 98 498 105 HOH HOH . M 6 HOH A 99 499 259 HOH HOH . M 6 HOH A 100 500 221 HOH HOH . M 6 HOH A 101 501 88 HOH HOH . M 6 HOH A 102 502 193 HOH HOH . M 6 HOH A 103 503 55 HOH HOH . M 6 HOH A 104 504 294 HOH HOH . M 6 HOH A 105 505 198 HOH HOH . M 6 HOH A 106 506 209 HOH HOH . M 6 HOH A 107 507 300 HOH HOH . M 6 HOH A 108 508 183 HOH HOH . M 6 HOH A 109 509 272 HOH HOH . M 6 HOH A 110 510 173 HOH HOH . M 6 HOH A 111 511 169 HOH HOH . M 6 HOH A 112 512 82 HOH HOH . M 6 HOH A 113 513 236 HOH HOH . M 6 HOH A 114 514 246 HOH HOH . M 6 HOH A 115 515 305 HOH HOH . M 6 HOH A 116 516 276 HOH HOH . M 6 HOH A 117 517 124 HOH HOH . M 6 HOH A 118 518 255 HOH HOH . M 6 HOH A 119 519 298 HOH HOH . M 6 HOH A 120 520 204 HOH HOH . M 6 HOH A 121 521 217 HOH HOH . M 6 HOH A 122 522 262 HOH HOH . M 6 HOH A 123 523 269 HOH HOH . M 6 HOH A 124 524 313 HOH HOH . M 6 HOH A 125 525 304 HOH HOH . M 6 HOH A 126 526 200 HOH HOH . M 6 HOH A 127 527 312 HOH HOH . M 6 HOH A 128 528 164 HOH HOH . M 6 HOH A 129 529 310 HOH HOH . M 6 HOH A 130 530 296 HOH HOH . M 6 HOH A 131 531 311 HOH HOH . M 6 HOH A 132 532 187 HOH HOH . N 6 HOH B 1 301 179 HOH HOH . N 6 HOH B 2 302 12 HOH HOH . N 6 HOH B 3 303 241 HOH HOH . N 6 HOH B 4 304 23 HOH HOH . N 6 HOH B 5 305 77 HOH HOH . N 6 HOH B 6 306 68 HOH HOH . N 6 HOH B 7 307 184 HOH HOH . N 6 HOH B 8 308 112 HOH HOH . N 6 HOH B 9 309 229 HOH HOH . N 6 HOH B 10 310 126 HOH HOH . N 6 HOH B 11 311 177 HOH HOH . N 6 HOH B 12 312 11 HOH HOH . N 6 HOH B 13 313 80 HOH HOH . N 6 HOH B 14 314 97 HOH HOH . N 6 HOH B 15 315 73 HOH HOH . N 6 HOH B 16 316 150 HOH HOH . N 6 HOH B 17 317 270 HOH HOH . N 6 HOH B 18 318 235 HOH HOH . N 6 HOH B 19 319 40 HOH HOH . N 6 HOH B 20 320 17 HOH HOH . N 6 HOH B 21 321 90 HOH HOH . N 6 HOH B 22 322 291 HOH HOH . N 6 HOH B 23 323 87 HOH HOH . N 6 HOH B 24 324 258 HOH HOH . N 6 HOH B 25 325 299 HOH HOH . N 6 HOH B 26 326 161 HOH HOH . N 6 HOH B 27 327 104 HOH HOH . N 6 HOH B 28 328 67 HOH HOH . N 6 HOH B 29 329 189 HOH HOH . N 6 HOH B 30 330 37 HOH HOH . N 6 HOH B 31 331 216 HOH HOH . N 6 HOH B 32 332 212 HOH HOH . N 6 HOH B 33 333 160 HOH HOH . N 6 HOH B 34 334 132 HOH HOH . N 6 HOH B 35 335 280 HOH HOH . N 6 HOH B 36 336 62 HOH HOH . N 6 HOH B 37 337 220 HOH HOH . N 6 HOH B 38 338 206 HOH HOH . N 6 HOH B 39 339 239 HOH HOH . N 6 HOH B 40 340 84 HOH HOH . N 6 HOH B 41 341 91 HOH HOH . N 6 HOH B 42 342 6 HOH HOH . N 6 HOH B 43 343 10 HOH HOH . N 6 HOH B 44 344 245 HOH HOH . N 6 HOH B 45 345 41 HOH HOH . N 6 HOH B 46 346 108 HOH HOH . N 6 HOH B 47 347 141 HOH HOH . N 6 HOH B 48 348 303 HOH HOH . N 6 HOH B 49 349 151 HOH HOH . N 6 HOH B 50 350 14 HOH HOH . N 6 HOH B 51 351 4 HOH HOH . N 6 HOH B 52 352 163 HOH HOH . N 6 HOH B 53 353 129 HOH HOH . N 6 HOH B 54 354 142 HOH HOH . N 6 HOH B 55 355 201 HOH HOH . N 6 HOH B 56 356 157 HOH HOH . N 6 HOH B 57 357 149 HOH HOH . N 6 HOH B 58 358 46 HOH HOH . N 6 HOH B 59 359 168 HOH HOH . N 6 HOH B 60 360 59 HOH HOH . N 6 HOH B 61 361 54 HOH HOH . N 6 HOH B 62 362 49 HOH HOH . N 6 HOH B 63 363 148 HOH HOH . N 6 HOH B 64 364 233 HOH HOH . N 6 HOH B 65 365 145 HOH HOH . N 6 HOH B 66 366 128 HOH HOH . N 6 HOH B 67 367 36 HOH HOH . N 6 HOH B 68 368 51 HOH HOH . N 6 HOH B 69 369 252 HOH HOH . N 6 HOH B 70 370 33 HOH HOH . N 6 HOH B 71 371 42 HOH HOH . N 6 HOH B 72 372 178 HOH HOH . N 6 HOH B 73 373 134 HOH HOH . N 6 HOH B 74 374 118 HOH HOH . N 6 HOH B 75 375 230 HOH HOH . N 6 HOH B 76 376 267 HOH HOH . N 6 HOH B 77 377 274 HOH HOH . N 6 HOH B 78 378 18 HOH HOH . N 6 HOH B 79 379 224 HOH HOH . N 6 HOH B 80 380 234 HOH HOH . N 6 HOH B 81 381 308 HOH HOH . N 6 HOH B 82 382 28 HOH HOH . N 6 HOH B 83 383 75 HOH HOH . N 6 HOH B 84 384 243 HOH HOH . N 6 HOH B 85 385 81 HOH HOH . N 6 HOH B 86 386 175 HOH HOH . N 6 HOH B 87 387 207 HOH HOH . N 6 HOH B 88 388 155 HOH HOH . N 6 HOH B 89 389 211 HOH HOH . N 6 HOH B 90 390 92 HOH HOH . N 6 HOH B 91 391 247 HOH HOH . N 6 HOH B 92 392 231 HOH HOH . N 6 HOH B 93 393 219 HOH HOH . N 6 HOH B 94 394 210 HOH HOH . N 6 HOH B 95 395 254 HOH HOH . N 6 HOH B 96 396 190 HOH HOH . N 6 HOH B 97 397 286 HOH HOH . N 6 HOH B 98 398 60 HOH HOH . N 6 HOH B 99 399 167 HOH HOH . N 6 HOH B 100 400 228 HOH HOH . N 6 HOH B 101 401 293 HOH HOH . N 6 HOH B 102 402 171 HOH HOH . N 6 HOH B 103 403 278 HOH HOH . N 6 HOH B 104 404 283 HOH HOH . N 6 HOH B 105 405 292 HOH HOH . N 6 HOH B 106 406 182 HOH HOH . N 6 HOH B 107 407 297 HOH HOH . N 6 HOH B 108 408 214 HOH HOH . O 6 HOH C 1 301 275 HOH HOH . O 6 HOH C 2 302 317 HOH HOH . O 6 HOH C 3 303 27 HOH HOH . O 6 HOH C 4 304 282 HOH HOH . O 6 HOH C 5 305 95 HOH HOH . O 6 HOH C 6 306 197 HOH HOH . O 6 HOH C 7 307 69 HOH HOH . O 6 HOH C 8 308 146 HOH HOH . O 6 HOH C 9 309 172 HOH HOH . O 6 HOH C 10 310 34 HOH HOH . O 6 HOH C 11 311 94 HOH HOH . O 6 HOH C 12 312 208 HOH HOH . O 6 HOH C 13 313 115 HOH HOH . O 6 HOH C 14 314 256 HOH HOH . O 6 HOH C 15 315 232 HOH HOH . O 6 HOH C 16 316 181 HOH HOH . O 6 HOH C 17 317 185 HOH HOH . O 6 HOH C 18 318 16 HOH HOH . O 6 HOH C 19 319 266 HOH HOH . O 6 HOH C 20 320 133 HOH HOH . O 6 HOH C 21 321 107 HOH HOH . O 6 HOH C 22 322 240 HOH HOH . O 6 HOH C 23 323 1 HOH HOH . O 6 HOH C 24 324 242 HOH HOH . O 6 HOH C 25 325 53 HOH HOH . O 6 HOH C 26 326 265 HOH HOH . O 6 HOH C 27 327 306 HOH HOH . O 6 HOH C 28 328 237 HOH HOH . O 6 HOH C 29 329 250 HOH HOH . O 6 HOH C 30 330 5 HOH HOH . O 6 HOH C 31 331 248 HOH HOH . O 6 HOH C 32 332 85 HOH HOH . O 6 HOH C 33 333 64 HOH HOH . O 6 HOH C 34 334 218 HOH HOH . O 6 HOH C 35 335 307 HOH HOH . O 6 HOH C 36 336 135 HOH HOH . O 6 HOH C 37 337 61 HOH HOH . O 6 HOH C 38 338 79 HOH HOH . O 6 HOH C 39 339 29 HOH HOH . O 6 HOH C 40 340 70 HOH HOH . O 6 HOH C 41 341 86 HOH HOH . O 6 HOH C 42 342 314 HOH HOH . O 6 HOH C 43 343 287 HOH HOH . O 6 HOH C 44 344 103 HOH HOH . O 6 HOH C 45 345 152 HOH HOH . O 6 HOH C 46 346 281 HOH HOH . O 6 HOH C 47 347 137 HOH HOH . O 6 HOH C 48 348 271 HOH HOH . O 6 HOH C 49 349 162 HOH HOH . O 6 HOH C 50 350 253 HOH HOH . O 6 HOH C 51 351 165 HOH HOH . O 6 HOH C 52 352 78 HOH HOH . O 6 HOH C 53 353 226 HOH HOH . O 6 HOH C 54 354 25 HOH HOH . O 6 HOH C 55 355 122 HOH HOH . O 6 HOH C 56 356 174 HOH HOH . O 6 HOH C 57 357 260 HOH HOH . O 6 HOH C 58 358 127 HOH HOH . O 6 HOH C 59 359 159 HOH HOH . O 6 HOH C 60 360 119 HOH HOH . O 6 HOH C 61 361 251 HOH HOH . O 6 HOH C 62 362 116 HOH HOH . O 6 HOH C 63 363 309 HOH HOH . O 6 HOH C 64 364 176 HOH HOH . O 6 HOH C 65 365 191 HOH HOH . O 6 HOH C 66 366 261 HOH HOH . O 6 HOH C 67 367 301 HOH HOH . O 6 HOH C 68 368 302 HOH HOH . O 6 HOH C 69 369 295 HOH HOH . O 6 HOH C 70 370 238 HOH HOH . O 6 HOH C 71 371 205 HOH HOH . O 6 HOH C 72 372 111 HOH HOH . O 6 HOH C 73 373 315 HOH HOH . O 6 HOH C 74 374 316 HOH HOH . O 6 HOH C 75 375 244 HOH HOH . O 6 HOH C 76 376 264 HOH HOH . O 6 HOH C 77 377 285 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 3 5.858 -19.249 5.162 1 20.62 ? PB GDP 302 A 1 HETATM 2 O O1B GDP . . . E 3 5.358 -18.075 4.349 1 19.02 ? O1B GDP 302 A 1 HETATM 3 O O2B GDP . . . E 3 6.108 -18.859 6.594 1 22.14 ? O2B GDP 302 A 1 HETATM 4 O O3B GDP . . . E 3 5.09 -20.528 4.938 1 20.65 ? O3B GDP 302 A 1 HETATM 5 O O3A GDP . . . E 3 7.352 -19.549 4.619 1 17.52 ? O3A GDP 302 A 1 HETATM 6 P PA GDP . . . E 3 7.802 -20.746 3.608 1 20.28 ? PA GDP 302 A 1 HETATM 7 O O1A GDP . . . E 3 6.912 -20.649 2.4 1 19.33 ? O1A GDP 302 A 1 HETATM 8 O O2A GDP . . . E 3 7.936 -22.053 4.344 1 21.09 ? O2A GDP 302 A 1 HETATM 9 O O5' GDP . . . E 3 9.304 -20.294 3.305 1 17.8 ? O5' GDP 302 A 1 HETATM 10 C C5' GDP . . . E 3 9.572 -19.005 2.726 1 18.99 ? C5' GDP 302 A 1 HETATM 11 C C4' GDP . . . E 3 10.91 -19.055 2.016 1 21.29 ? C4' GDP 302 A 1 HETATM 12 O O4' GDP . . . E 3 11.952 -19.278 2.979 1 19.55 ? O4' GDP 302 A 1 HETATM 13 C C3' GDP . . . E 3 10.93 -20.228 1.041 1 24.24 ? C3' GDP 302 A 1 HETATM 14 O O3' GDP . . . E 3 11.599 -19.835 -0.163 1 26.38 ? O3' GDP 302 A 1 HETATM 15 C C2' GDP . . . E 3 11.757 -21.289 1.736 1 22.5 ? C2' GDP 302 A 1 HETATM 16 O O2' GDP . . . E 3 12.527 -22.038 0.809 1 32.74 ? O2' GDP 302 A 1 HETATM 17 C C1' GDP . . . E 3 12.668 -20.494 2.643 1 23.62 ? C1' GDP 302 A 1 HETATM 18 N N9 GDP . . . E 3 12.986 -21.202 3.908 1 21.2 ? N9 GDP 302 A 1 HETATM 19 C C8 GDP . . . E 3 12.094 -21.697 4.788 1 17.61 ? C8 GDP 302 A 1 HETATM 20 N N7 GDP . . . E 3 12.726 -22.222 5.866 1 17.56 ? N7 GDP 302 A 1 HETATM 21 C C5 GDP . . . E 3 14.053 -22.063 5.673 1 14.12 ? C5 GDP 302 A 1 HETATM 22 C C6 GDP . . . E 3 15.273 -22.406 6.427 1 21.18 ? C6 GDP 302 A 1 HETATM 23 O O6 GDP . . . E 3 15.157 -22.994 7.531 1 21.26 ? O6 GDP 302 A 1 HETATM 24 N N1 GDP . . . E 3 16.465 -22.066 5.901 1 18.93 ? N1 GDP 302 A 1 HETATM 25 C C2 GDP . . . E 3 16.542 -21.425 4.699 1 21.23 ? C2 GDP 302 A 1 HETATM 26 N N2 GDP . . . E 3 17.742 -21.097 4.182 1 17.22 ? N2 GDP 302 A 1 HETATM 27 N N3 GDP . . . E 3 15.465 -21.09 3.953 1 18.31 ? N3 GDP 302 A 1 HETATM 28 C C4 GDP . . . E 3 14.217 -21.387 4.386 1 18.66 ? C4 GDP 302 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #