data_7EZF # _model_server_result.job_id VOazvR0KW5Jm1C1ZSdUcHQ _model_server_result.datetime_utc '2025-07-10 17:54:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ezf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 7EZF # _exptl.entry_id 7EZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.14 _cell.angle_gamma 90 _cell.entry_id 7EZF _cell.length_a 67.076 _cell.length_b 143.329 _cell.length_c 73.491 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 118 n n P1 O2P FBP sing 119 n n P1 O3P FBP sing 120 n n P1 O1 FBP sing 121 n n O2P HOP2 FBP sing 122 n n O3P HOP3 FBP sing 123 n n O1 C1 FBP sing 124 n n C1 C2 FBP sing 125 n n C1 H11 FBP sing 126 n n C1 H12 FBP sing 127 n n C2 O2 FBP sing 128 n n C2 C3 FBP sing 129 n n C2 O5 FBP sing 130 n n O2 HO2 FBP sing 131 n n C3 O3 FBP sing 132 n n C3 C4 FBP sing 133 n n C3 H3 FBP sing 134 n n O3 HO3 FBP sing 135 n n C4 O4 FBP sing 136 n n C4 C5 FBP sing 137 n n C4 H4 FBP sing 138 n n O4 HO4 FBP sing 139 n n C5 O5 FBP sing 140 n n C5 C6 FBP sing 141 n n C5 H5 FBP sing 142 n n C6 O6 FBP sing 143 n n C6 H61 FBP sing 144 n n C6 H62 FBP sing 145 n n O6 P2 FBP sing 146 n n P2 O4P FBP doub 147 n n P2 O5P FBP sing 148 n n P2 O6P FBP sing 149 n n O5P HOP5 FBP sing 150 n n O6P HOP6 FBP sing 151 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 7EZF _atom_sites.fract_transf_matrix[1][1] 0.014908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004885 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 0KI A 1 401 401 0KI LIG . F 3 FBP A 1 402 402 FBP FBP . G 2 0KI B 1 401 401 0KI LIG . H 3 FBP B 1 402 402 FBP FBP . I 2 0KI C 1 401 401 0KI LIG . J 3 FBP C 1 402 402 FBP FBP . K 2 0KI D 1 401 401 0KI LIG . L 3 FBP D 1 402 402 FBP FBP . M 4 HOH A 1 501 20 HOH HOH . M 4 HOH A 2 502 85 HOH HOH . M 4 HOH A 3 503 33 HOH HOH . M 4 HOH A 4 504 6 HOH HOH . M 4 HOH A 5 505 108 HOH HOH . M 4 HOH A 6 506 161 HOH HOH . M 4 HOH A 7 507 10 HOH HOH . M 4 HOH A 8 508 14 HOH HOH . M 4 HOH A 9 509 109 HOH HOH . M 4 HOH A 10 510 135 HOH HOH . M 4 HOH A 11 511 45 HOH HOH . M 4 HOH A 12 512 37 HOH HOH . M 4 HOH A 13 513 63 HOH HOH . M 4 HOH A 14 514 90 HOH HOH . M 4 HOH A 15 515 3 HOH HOH . M 4 HOH A 16 516 126 HOH HOH . M 4 HOH A 17 517 32 HOH HOH . M 4 HOH A 18 518 28 HOH HOH . M 4 HOH A 19 519 114 HOH HOH . M 4 HOH A 20 520 59 HOH HOH . M 4 HOH A 21 521 99 HOH HOH . M 4 HOH A 22 522 155 HOH HOH . M 4 HOH A 23 523 160 HOH HOH . M 4 HOH A 24 524 77 HOH HOH . M 4 HOH A 25 525 143 HOH HOH . M 4 HOH A 26 526 25 HOH HOH . M 4 HOH A 27 527 167 HOH HOH . M 4 HOH A 28 528 87 HOH HOH . M 4 HOH A 29 529 71 HOH HOH . M 4 HOH A 30 530 75 HOH HOH . M 4 HOH A 31 531 149 HOH HOH . M 4 HOH A 32 532 164 HOH HOH . N 4 HOH B 1 501 69 HOH HOH . N 4 HOH B 2 502 39 HOH HOH . N 4 HOH B 3 503 133 HOH HOH . N 4 HOH B 4 504 62 HOH HOH . N 4 HOH B 5 505 112 HOH HOH . N 4 HOH B 6 506 16 HOH HOH . N 4 HOH B 7 507 31 HOH HOH . N 4 HOH B 8 508 102 HOH HOH . N 4 HOH B 9 509 163 HOH HOH . N 4 HOH B 10 510 104 HOH HOH . N 4 HOH B 11 511 53 HOH HOH . N 4 HOH B 12 512 21 HOH HOH . N 4 HOH B 13 513 146 HOH HOH . N 4 HOH B 14 514 86 HOH HOH . N 4 HOH B 15 515 95 HOH HOH . N 4 HOH B 16 516 141 HOH HOH . N 4 HOH B 17 517 13 HOH HOH . N 4 HOH B 18 518 17 HOH HOH . N 4 HOH B 19 519 29 HOH HOH . N 4 HOH B 20 520 11 HOH HOH . N 4 HOH B 21 521 57 HOH HOH . N 4 HOH B 22 522 24 HOH HOH . N 4 HOH B 23 523 9 HOH HOH . N 4 HOH B 24 524 139 HOH HOH . N 4 HOH B 25 525 117 HOH HOH . N 4 HOH B 26 526 128 HOH HOH . N 4 HOH B 27 527 83 HOH HOH . N 4 HOH B 28 528 12 HOH HOH . N 4 HOH B 29 529 142 HOH HOH . N 4 HOH B 30 530 150 HOH HOH . N 4 HOH B 31 531 93 HOH HOH . N 4 HOH B 32 532 153 HOH HOH . N 4 HOH B 33 533 120 HOH HOH . N 4 HOH B 34 534 106 HOH HOH . N 4 HOH B 35 535 157 HOH HOH . N 4 HOH B 36 536 51 HOH HOH . N 4 HOH B 37 537 125 HOH HOH . N 4 HOH B 38 538 5 HOH HOH . O 4 HOH C 1 501 119 HOH HOH . O 4 HOH C 2 502 41 HOH HOH . O 4 HOH C 3 503 30 HOH HOH . O 4 HOH C 4 504 49 HOH HOH . O 4 HOH C 5 505 36 HOH HOH . O 4 HOH C 6 506 92 HOH HOH . O 4 HOH C 7 507 81 HOH HOH . O 4 HOH C 8 508 61 HOH HOH . O 4 HOH C 9 509 67 HOH HOH . O 4 HOH C 10 510 98 HOH HOH . O 4 HOH C 11 511 68 HOH HOH . O 4 HOH C 12 512 2 HOH HOH . O 4 HOH C 13 513 70 HOH HOH . O 4 HOH C 14 514 40 HOH HOH . O 4 HOH C 15 515 19 HOH HOH . O 4 HOH C 16 516 27 HOH HOH . O 4 HOH C 17 517 82 HOH HOH . O 4 HOH C 18 518 65 HOH HOH . O 4 HOH C 19 519 79 HOH HOH . O 4 HOH C 20 520 116 HOH HOH . O 4 HOH C 21 521 34 HOH HOH . O 4 HOH C 22 522 130 HOH HOH . O 4 HOH C 23 523 138 HOH HOH . O 4 HOH C 24 524 38 HOH HOH . O 4 HOH C 25 525 7 HOH HOH . O 4 HOH C 26 526 162 HOH HOH . O 4 HOH C 27 527 84 HOH HOH . O 4 HOH C 28 528 134 HOH HOH . O 4 HOH C 29 529 15 HOH HOH . O 4 HOH C 30 530 64 HOH HOH . O 4 HOH C 31 531 50 HOH HOH . O 4 HOH C 32 532 148 HOH HOH . O 4 HOH C 33 533 166 HOH HOH . O 4 HOH C 34 534 47 HOH HOH . O 4 HOH C 35 535 42 HOH HOH . O 4 HOH C 36 536 140 HOH HOH . O 4 HOH C 37 537 35 HOH HOH . O 4 HOH C 38 538 76 HOH HOH . O 4 HOH C 39 539 127 HOH HOH . O 4 HOH C 40 540 144 HOH HOH . O 4 HOH C 41 541 132 HOH HOH . O 4 HOH C 42 542 107 HOH HOH . O 4 HOH C 43 543 18 HOH HOH . O 4 HOH C 44 544 165 HOH HOH . O 4 HOH C 45 545 151 HOH HOH . O 4 HOH C 46 546 111 HOH HOH . O 4 HOH C 47 547 118 HOH HOH . O 4 HOH C 48 548 147 HOH HOH . O 4 HOH C 49 549 152 HOH HOH . P 4 HOH D 1 501 74 HOH HOH . P 4 HOH D 2 502 1 HOH HOH . P 4 HOH D 3 503 91 HOH HOH . P 4 HOH D 4 504 46 HOH HOH . P 4 HOH D 5 505 137 HOH HOH . P 4 HOH D 6 506 56 HOH HOH . P 4 HOH D 7 507 101 HOH HOH . P 4 HOH D 8 508 154 HOH HOH . P 4 HOH D 9 509 131 HOH HOH . P 4 HOH D 10 510 22 HOH HOH . P 4 HOH D 11 511 115 HOH HOH . P 4 HOH D 12 512 72 HOH HOH . P 4 HOH D 13 513 23 HOH HOH . P 4 HOH D 14 514 4 HOH HOH . P 4 HOH D 15 515 136 HOH HOH . P 4 HOH D 16 516 52 HOH HOH . P 4 HOH D 17 517 55 HOH HOH . P 4 HOH D 18 518 159 HOH HOH . P 4 HOH D 19 519 73 HOH HOH . P 4 HOH D 20 520 8 HOH HOH . P 4 HOH D 21 521 66 HOH HOH . P 4 HOH D 22 522 60 HOH HOH . P 4 HOH D 23 523 26 HOH HOH . P 4 HOH D 24 524 113 HOH HOH . P 4 HOH D 25 525 78 HOH HOH . P 4 HOH D 26 526 44 HOH HOH . P 4 HOH D 27 527 89 HOH HOH . P 4 HOH D 28 528 94 HOH HOH . P 4 HOH D 29 529 122 HOH HOH . P 4 HOH D 30 530 48 HOH HOH . P 4 HOH D 31 531 110 HOH HOH . P 4 HOH D 32 532 156 HOH HOH . P 4 HOH D 33 533 121 HOH HOH . P 4 HOH D 34 534 80 HOH HOH . P 4 HOH D 35 535 88 HOH HOH . P 4 HOH D 36 536 103 HOH HOH . P 4 HOH D 37 537 97 HOH HOH . P 4 HOH D 38 538 54 HOH HOH . P 4 HOH D 39 539 168 HOH HOH . P 4 HOH D 40 540 129 HOH HOH . P 4 HOH D 41 541 105 HOH HOH . P 4 HOH D 42 542 124 HOH HOH . P 4 HOH D 43 543 100 HOH HOH . P 4 HOH D 44 544 58 HOH HOH . P 4 HOH D 45 545 123 HOH HOH . P 4 HOH D 46 546 43 HOH HOH . P 4 HOH D 47 547 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . . . J 3 22.6 -25.195 20.496 1 46.44 ? P1 FBP 402 C 1 HETATM 2 O O1P FBP . . . J 3 22.313 -24.028 19.563 1 44.41 ? O1P FBP 402 C 1 HETATM 3 O O2P FBP . . . J 3 21.59 -26.303 20.248 1 47.3 ? O2P FBP 402 C 1 HETATM 4 O O3P FBP . . . J 3 22.551 -24.791 21.943 1 40.66 ? O3P FBP 402 C 1 HETATM 5 O O1 FBP . . . J 3 24.087 -25.875 20.194 1 45.67 ? O1 FBP 402 C 1 HETATM 6 C C1 FBP . . . J 3 25.284 -25.164 20.115 1 41.19 ? C1 FBP 402 C 1 HETATM 7 C C2 FBP . . . J 3 25.882 -25.108 21.483 1 40.78 ? C2 FBP 402 C 1 HETATM 8 O O2 FBP . . . J 3 24.857 -24.699 22.305 1 35.72 ? O2 FBP 402 C 1 HETATM 9 C C3 FBP . . . J 3 27.188 -24.041 21.448 1 40.16 ? C3 FBP 402 C 1 HETATM 10 O O3 FBP . . . J 3 26.672 -22.655 21.496 1 35.78 ? O3 FBP 402 C 1 HETATM 11 C C4 FBP . . . J 3 27.913 -24.366 22.456 1 39.74 ? C4 FBP 402 C 1 HETATM 12 O O4 FBP . . . J 3 29.394 -24.088 22.292 1 38.77 ? O4 FBP 402 C 1 HETATM 13 C C5 FBP . . . J 3 27.691 -25.933 22.635 1 39.21 ? C5 FBP 402 C 1 HETATM 14 O O5 FBP . . . J 3 26.384 -26.255 21.871 1 41.84 ? O5 FBP 402 C 1 HETATM 15 C C6 FBP . . . J 3 27.608 -26.304 23.964 1 39.46 ? C6 FBP 402 C 1 HETATM 16 O O6 FBP . . . J 3 28.202 -27.598 24.014 1 46.12 ? O6 FBP 402 C 1 HETATM 17 P P2 FBP . . . J 3 28.277 -28.544 25.368 1 44.61 ? P2 FBP 402 C 1 HETATM 18 O O4P FBP . . . J 3 28.504 -29.96 24.881 1 41.42 ? O4P FBP 402 C 1 HETATM 19 O O5P FBP . . . J 3 26.914 -28.34 26.014 1 40.92 ? O5P FBP 402 C 1 HETATM 20 O O6P FBP . . . J 3 29.426 -28.095 26.236 1 36.7 ? O6P FBP 402 C 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #