data_7EZR # _model_server_result.job_id EvC11T8ENTKI_jxTVwAY6Q _model_server_result.datetime_utc '2025-07-10 13:04:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ezr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 7EZR # _exptl.entry_id 7EZR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.657 _cell.angle_gamma 90 _cell.entry_id 7EZR _cell.length_a 66.902 _cell.length_b 142.591 _cell.length_c 73.575 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EZR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 132 n n P1 O2P FBP sing 133 n n P1 O3P FBP sing 134 n n P1 O1 FBP sing 135 n n O2P HOP2 FBP sing 136 n n O3P HOP3 FBP sing 137 n n O1 C1 FBP sing 138 n n C1 C2 FBP sing 139 n n C1 H11 FBP sing 140 n n C1 H12 FBP sing 141 n n C2 O2 FBP sing 142 n n C2 C3 FBP sing 143 n n C2 O5 FBP sing 144 n n O2 HO2 FBP sing 145 n n C3 O3 FBP sing 146 n n C3 C4 FBP sing 147 n n C3 H3 FBP sing 148 n n O3 HO3 FBP sing 149 n n C4 O4 FBP sing 150 n n C4 C5 FBP sing 151 n n C4 H4 FBP sing 152 n n O4 HO4 FBP sing 153 n n C5 O5 FBP sing 154 n n C5 C6 FBP sing 155 n n C5 H5 FBP sing 156 n n C6 O6 FBP sing 157 n n C6 H61 FBP sing 158 n n C6 H62 FBP sing 159 n n O6 P2 FBP sing 160 n n P2 O4P FBP doub 161 n n P2 O5P FBP sing 162 n n P2 O6P FBP sing 163 n n O5P HOP5 FBP sing 164 n n O6P HOP6 FBP sing 165 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 7EZR _atom_sites.fract_transf_matrix[1][1] 0.014947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005047 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 0H1 A 1 401 6 0H1 LIG . F 3 FBP A 1 402 401 FBP FBP . G 2 0H1 B 1 401 6 0H1 LIG . H 3 FBP B 1 402 401 FBP FBP . I 2 0H1 C 1 401 6 0H1 LIG . J 3 FBP C 1 402 401 FBP FBP . K 2 0H1 D 1 401 6 0H1 LIG . L 3 FBP D 1 402 401 FBP FBP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . . . J 3 22.872 -25.171 20.01 1 60.21 ? P1 FBP 402 C 1 HETATM 2 O O1P FBP . . . J 3 21.926 -24.427 19.087 1 54.93 ? O1P FBP 402 C 1 HETATM 3 O O2P FBP . . . J 3 22.605 -26.662 19.937 1 61.59 ? O2P FBP 402 C 1 HETATM 4 O O3P FBP . . . J 3 22.66 -24.702 21.435 1 56.2 ? O3P FBP 402 C 1 HETATM 5 O O1 FBP . . . J 3 24.441 -24.853 19.579 1 57.89 ? O1 FBP 402 C 1 HETATM 6 C C1 FBP . . . J 3 25.463 -25.752 19.943 1 55.61 ? C1 FBP 402 C 1 HETATM 7 C C2 FBP . . . J 3 25.992 -25.408 21.318 1 54.8 ? C2 FBP 402 C 1 HETATM 8 O O2 FBP . . . J 3 24.985 -25.021 22.164 1 54.95 ? O2 FBP 402 C 1 HETATM 9 C C3 FBP . . . J 3 27.145 -24.207 21.262 1 53.03 ? C3 FBP 402 C 1 HETATM 10 O O3 FBP . . . J 3 26.503 -22.891 21.194 1 51.73 ? O3 FBP 402 C 1 HETATM 11 C C4 FBP . . . J 3 27.762 -24.341 22.346 1 52.74 ? C4 FBP 402 C 1 HETATM 12 O O4 FBP . . . J 3 29.146 -23.764 22.254 1 51.93 ? O4 FBP 402 C 1 HETATM 13 C C5 FBP . . . J 3 27.835 -25.915 22.519 1 54.78 ? C5 FBP 402 C 1 HETATM 14 O O5 FBP . . . J 3 26.589 -26.444 21.799 1 55.11 ? O5 FBP 402 C 1 HETATM 15 C C6 FBP . . . J 3 27.791 -26.302 23.839 1 55.19 ? C6 FBP 402 C 1 HETATM 16 O O6 FBP . . . J 3 27.334 -27.65 23.842 1 56.13 ? O6 FBP 402 C 1 HETATM 17 P P2 FBP . . . J 3 27.804 -28.68 25.043 1 56.86 ? P2 FBP 402 C 1 HETATM 18 O O4P FBP . . . J 3 28.485 -29.883 24.443 1 58.98 ? O4P FBP 402 C 1 HETATM 19 O O5P FBP . . . J 3 26.584 -29.129 25.81 1 56.24 ? O5P FBP 402 C 1 HETATM 20 O O6P FBP . . . J 3 28.768 -27.977 25.974 1 57.71 ? O6P FBP 402 C 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #