data_7F09
#
_model_server_result.job_id            JSpTU1C3Ix54jwY-XZpzYg 
_model_server_result.datetime_utc      '2024-12-26 18:37:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f09 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    7F09 
#
_exptl.entry_id    7F09 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         85.24 
_cell.angle_beta          87.21 
_cell.angle_gamma         88.32 
_cell.entry_id            7F09 
_cell.length_a            27.94 
_cell.length_b            47.37 
_cell.length_c            69.96 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F09 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,Q,R 1 1 
C,D,K,L,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N GLY 1 A GLY 359 1_555 G ZN ZN . B ZN 502 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc2 A O GLY 1 A GLY 359 1_555 G ZN ZN . B ZN 502 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc3 A OD2 ASP 6 A ASP 364 1_555 G ZN ZN . B ZN 502 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc4 B N GLY 1 B GLY 359 1_555 H ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc5 B O GLY 1 B GLY 359 1_555 H ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc6 B NE ARG 7 B ARG 365 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc7 B OE2 GLU 10 B GLU 368 1_555 G ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc8 B OE1 GLU 71 B GLU 429 1_555 H ZN ZN . B ZN 503 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? 
metalc ? metalc9 B OE2 GLU 71 B GLU 429 1_555 H ZN ZN . B ZN 503 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? 
metalc ? metalc10 F ZN ZN . B ZN 501 1_555 R O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc11 F ZN ZN . B ZN 501 1_555 R O HOH . B HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc12 H ZN ZN . B ZN 503 1_555 R O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc13 C N GLY 1 C GLY 359 1_555 L ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc14 C O GLY 1 C GLY 359 1_555 L ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc15 C OD2 ASP 6 C ASP 364 1_555 L ZN ZN . C ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc16 C OE1 GLU 10 C GLU 368 1_555 K ZN ZN . C ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc17 K ZN ZN . C ZN 501 1_555 S O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? 
metalc ? metalc18 L ZN ZN . C ZN 502 1_555 S O HOH . C HOH 602 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc19 L ZN ZN . C ZN 502 1_455 D OE2 GLU 10 D GLU 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc20 D N GLY 1 D GLY 359 1_555 M ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc21 D O GLY 1 D GLY 359 1_555 M ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc22 D OE1 GLU 71 D GLU 429 1_555 M ZN ZN . D ZN 501 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc23 D OE2 GLU 71 D GLU 429 1_555 M ZN ZN . D ZN 501 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc24 M ZN ZN . D ZN 501 1_555 T O HOH . D HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7F09 
_atom_sites.fract_transf_matrix[1][1]    0.035791 
_atom_sites.fract_transf_matrix[1][2]    -0.001051 
_atom_sites.fract_transf_matrix[1][3]    -0.001666 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02112 
_atom_sites.fract_transf_matrix[2][3]    -0.00173 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014359 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EDO A 1 501 3 EDO EDO . 
F 3 ZN B 1 501 2 ZN ZN . 
G 3 ZN B 1 502 4 ZN ZN . 
H 3 ZN B 1 503 6 ZN ZN . 
I 2 EDO B 1 504 1 EDO EDO . 
J 2 EDO B 1 505 4 EDO EDO . 
K 3 ZN C 1 501 1 ZN ZN . 
L 3 ZN C 1 502 5 ZN ZN . 
M 3 ZN D 1 501 3 ZN ZN . 
N 2 EDO D 1 502 2 EDO EDO . 
O 2 EDO D 1 503 5 EDO EDO . 
P 2 EDO D 1 504 6 EDO EDO . 
Q 4 HOH A 1 601 46 HOH HOH . 
Q 4 HOH A 2 602 2 HOH HOH . 
Q 4 HOH A 3 603 3 HOH HOH . 
Q 4 HOH A 4 604 14 HOH HOH . 
Q 4 HOH A 5 605 29 HOH HOH . 
Q 4 HOH A 6 606 20 HOH HOH . 
Q 4 HOH A 7 607 25 HOH HOH . 
Q 4 HOH A 8 608 15 HOH HOH . 
Q 4 HOH A 9 609 11 HOH HOH . 
Q 4 HOH A 10 610 24 HOH HOH . 
Q 4 HOH A 11 611 5 HOH HOH . 
Q 4 HOH A 12 612 28 HOH HOH . 
Q 4 HOH A 13 613 26 HOH HOH . 
Q 4 HOH A 14 614 19 HOH HOH . 
Q 4 HOH A 15 615 49 HOH HOH . 
Q 4 HOH A 16 616 17 HOH HOH . 
Q 4 HOH A 17 617 30 HOH HOH . 
R 4 HOH B 1 601 38 HOH HOH . 
R 4 HOH B 2 602 16 HOH HOH . 
R 4 HOH B 3 603 31 HOH HOH . 
R 4 HOH B 4 604 6 HOH HOH . 
R 4 HOH B 5 605 10 HOH HOH . 
R 4 HOH B 6 606 37 HOH HOH . 
R 4 HOH B 7 607 4 HOH HOH . 
R 4 HOH B 8 608 51 HOH HOH . 
R 4 HOH B 9 609 39 HOH HOH . 
R 4 HOH B 10 610 48 HOH HOH . 
R 4 HOH B 11 611 50 HOH HOH . 
R 4 HOH B 12 612 47 HOH HOH . 
R 4 HOH B 13 613 12 HOH HOH . 
R 4 HOH B 14 614 18 HOH HOH . 
R 4 HOH B 15 615 27 HOH HOH . 
R 4 HOH B 16 616 52 HOH HOH . 
S 4 HOH C 1 601 13 HOH HOH . 
S 4 HOH C 2 602 7 HOH HOH . 
S 4 HOH C 3 603 32 HOH HOH . 
S 4 HOH C 4 604 9 HOH HOH . 
S 4 HOH C 5 605 8 HOH HOH . 
S 4 HOH C 6 606 45 HOH HOH . 
S 4 HOH C 7 607 35 HOH HOH . 
S 4 HOH C 8 608 42 HOH HOH . 
T 4 HOH D 1 601 43 HOH HOH . 
T 4 HOH D 2 602 41 HOH HOH . 
T 4 HOH D 3 603 1 HOH HOH . 
T 4 HOH D 4 604 21 HOH HOH . 
T 4 HOH D 5 605 22 HOH HOH . 
T 4 HOH D 6 606 23 HOH HOH . 
T 4 HOH D 7 607 33 HOH HOH . 
T 4 HOH D 8 608 36 HOH HOH . 
T 4 HOH D 9 609 44 HOH HOH . 
T 4 HOH D 10 610 34 HOH HOH . 
T 4 HOH D 11 611 40 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               13.613 
_atom_site.Cartn_y               16.277 
_atom_site.Cartn_z               24.349 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        164.48 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           36 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#