data_7F0L # _model_server_result.job_id NSCY7mdnNGmn1i3ZQoO9dw _model_server_result.datetime_utc '2024-10-15 10:27:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f0l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"XD","auth_seq_id":104}' # _entry.id 7F0L # _exptl.entry_id 7F0L _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 568.914 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SPHEROIDENE _entity.pdbx_number_of_molecules 27 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F0L _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F0L _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 33-meric _pdbx_struct_assembly.oligomeric_count 33 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD,HD,ID,JD,KD,LD,MD,ND,OD,PD,QD,RD,SD,TD,UD,VD,WD,XD,YD,ZD,AE,BE,CE,DE,EE,FE,GE,HE,IE,JE,KE,LE,ME,NE,OE _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 YA N N ? 15 RB N N ? 15 TB N N ? 15 XB N N ? 15 YB N N ? 15 BC N N ? 15 CC N N ? 15 IC N N ? 15 KC N N ? 15 NC N N ? 15 OC N N ? 15 PC N N ? 15 VC N N ? 15 ZC N N ? 15 AD N N ? 15 DD N N ? 15 FD N N ? 15 GD N N ? 15 ID N N ? 15 PD N N ? 15 QD N N ? 15 SD N N ? 15 XD N N ? 15 CE N N ? 15 DE N N ? 15 GE N N ? 15 JE N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D C FME 1 A FME 1 1_555 D N SER 2 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 F C FME 1 D FME 1 1_555 F N SER 2 D SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 H C FME 1 F FME 1 1_555 H N SER 2 F SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 J C FME 1 I FME 1 1_555 J N SER 2 I SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 L C FME 1 K FME 1 1_555 L N SER 2 K SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 N C FME 1 O FME 1 1_555 N N SER 2 O SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 P C FME 1 Q FME 1 1_555 P N SER 2 Q SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 R C FME 1 S FME 1 1_555 R N SER 2 S SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 T C FME 1 V FME 1 1_555 T N SER 2 V SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 V C FME 1 Y FME 1 1_555 V N SER 2 Y SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 X C FME 1 1 FME 1 1_555 X N SER 2 1 SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 Z C FME 1 3 FME 1 1_555 Z N SER 2 3 SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A NE2 HIS 191 L HIS 190 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc2 A NE2 HIS 231 L HIS 230 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc3 B NE2 HIS 220 M HIS 219 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc4 B OE1 GLU 235 M GLU 234 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 B OE2 GLU 235 M GLU 234 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc6 B NE2 HIS 267 M HIS 266 1_555 WA FE FE . M FE 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? # _chem_comp.formula 'C41 H60 O' _chem_comp.formula_weight 568.914 _chem_comp.id SPO _chem_comp.mon_nstd_flag . _chem_comp.name SPHEROIDENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7F0L _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code HA 9 BCL L 1 301 301 BCL BCL . IA 10 BPH L 1 302 302 BPH BPH . JA 11 U10 L 1 303 500 U10 U10 . KA 11 U10 L 1 304 501 U10 U10 . LA 12 PGV L 1 305 802 PGV PGV . MA 12 PGV L 1 306 804 PGV PGV . NA 13 LDA L 1 307 810 LDA LDA . OA 9 BCL L 1 308 401 BCL BCL . PA 9 BCL L 1 309 402 BCL BCL . QA 12 PGV L 1 310 107 PGV PGV . RA 13 LDA L 1 311 101 LDA LDA . SA 12 PGV M 1 801 801 PGV PGV . TA 13 LDA M 1 802 811 LDA LDA . UA 9 BCL M 1 803 403 BCL BCL . VA 10 BPH M 1 804 404 BPH BPH . WA 14 FE M 1 805 500 FE FE . XA 11 U10 M 1 806 501 U10 U10 . YA 15 SPO M 1 807 600 SPO SPO . ZA 16 LMT M 1 808 701 LMT LMT . AB 16 LMT M 1 809 705 LMT LMT . BB 16 LMT M 1 810 706 LMT LMT . CB 17 CDL M 1 811 901 CDL CDL . DB 12 PGV M 1 812 903 PGV PGV . EB 16 LMT H 1 301 301 LMT LMT . FB 16 LMT H 1 302 303 LMT LMT . GB 12 PGV H 1 303 400 PGV PGV . HB 17 CDL H 1 304 401 CDL CDL . IB 17 CDL H 1 305 402 CDL CDL . JB 12 PGV H 1 306 105 PGV PGV . KB 12 PGV H 1 307 106 PGV PGV . LB 16 LMT A 1 701 701 LMT LMT . MB 16 LMT A 1 702 702 LMT LMT . NB 9 BCL A 1 703 101 BCL BCL . OB 16 LMT A 1 704 201 LMT LMT . PB 9 BCL B 1 101 101 BCL BCL . QB 9 BCL D 1 101 101 BCL BCL . RB 15 SPO D 1 102 110 SPO SPO . SB 16 LMT D 1 103 201 LMT LMT . TB 15 SPO E 1 101 111 SPO SPO . UB 9 BCL E 1 102 101 BCL BCL . VB 16 LMT F 1 101 705 LMT LMT . WB 9 BCL F 1 102 101 BCL BCL . XB 15 SPO F 1 103 110 SPO SPO . YB 15 SPO F 1 104 111 SPO SPO . ZB 16 LMT F 1 105 201 LMT LMT . AC 9 BCL G 1 101 101 BCL BCL . BC 15 SPO G 1 102 110 SPO SPO . CC 15 SPO G 1 103 111 SPO SPO . DC 9 BCL I 1 101 101 BCL BCL . EC 16 LMT I 1 102 201 LMT LMT . FC 9 BCL J 1 101 101 BCL BCL . GC 16 LMT K 1 101 302 LMT LMT . HC 9 BCL K 1 102 101 BCL BCL . IC 15 SPO K 1 103 110 SPO SPO . JC 12 PGV K 1 104 201 PGV PGV . KC 15 SPO N 1 101 111 SPO SPO . LC 9 BCL N 1 102 101 BCL BCL . MC 9 BCL O 1 101 101 BCL BCL . NC 15 SPO O 1 102 110 SPO SPO . OC 15 SPO O 1 103 110 SPO SPO . PC 15 SPO P 1 101 111 SPO SPO . QC 9 BCL P 1 102 101 BCL BCL . RC 16 LMT Q 1 101 702 LMT LMT . SC 16 LMT Q 1 102 704 LMT LMT . TC 12 PGV Q 1 103 904 PGV PGV . UC 9 BCL Q 1 104 101 BCL BCL . VC 15 SPO R 1 101 111 SPO SPO . WC 9 BCL R 1 102 101 BCL BCL . XC 16 LMT S 1 101 703 LMT LMT . YC 9 BCL S 1 102 101 BCL BCL . ZC 15 SPO S 1 103 110 SPO SPO . AD 15 SPO S 1 104 111 SPO SPO . BD 16 LMT S 1 105 201 LMT LMT . CD 9 BCL T 1 101 101 BCL BCL . DD 15 SPO T 1 102 111 SPO SPO . ED 9 BCL V 1 101 101 BCL BCL . FD 15 SPO V 1 102 110 SPO SPO . GD 15 SPO V 1 103 110 SPO SPO . HD 9 BCL W 1 101 101 BCL BCL . ID 15 SPO W 1 102 111 SPO SPO . JD 13 LDA Y 1 101 707 LDA LDA . KD 17 CDL Y 1 102 902 CDL CDL . LD 9 BCL Y 1 103 101 BCL BCL . MD 12 PGV Y 1 104 201 PGV PGV . ND 9 BCL Z 1 101 101 BCL BCL . OD 9 BCL 1 1 101 101 BCL BCL . PD 15 SPO 1 1 102 110 SPO SPO . QD 15 SPO 1 1 103 111 SPO SPO . RD 16 LMT 1 1 104 201 LMT LMT . SD 15 SPO 1 1 105 110 SPO SPO . TD 9 BCL 2 1 101 101 BCL BCL . UD 16 LMT 3 1 101 703 LMT LMT . VD 12 PGV 3 1 102 803 PGV PGV . WD 9 BCL 3 1 103 101 BCL BCL . XD 15 SPO 3 1 104 111 SPO SPO . YD 9 BCL 4 1 101 101 BCL BCL . ZD 16 LMT 4 1 102 201 LMT LMT . AE 16 LMT 5 1 101 704 LMT LMT . BE 9 BCL 5 1 102 101 BCL BCL . CE 15 SPO 5 1 103 110 SPO SPO . DE 15 SPO 5 1 104 111 SPO SPO . EE 9 BCL 6 1 101 101 BCL BCL . FE 9 BCL 7 1 101 101 BCL BCL . GE 15 SPO 8 1 101 111 SPO SPO . HE 9 BCL 8 1 102 101 BCL BCL . IE 12 PGV X 1 101 805 PGV PGV . JE 15 SPO X 1 102 110 SPO SPO . KE 13 LDA X 1 103 102 LDA LDA . LE 13 LDA X 1 104 103 LDA LDA . ME 16 LMT X 1 105 104 LMT LMT . NE 16 LMT U 1 101 706 LMT LMT . OE 16 LMT U 1 102 101 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CM1 SPO . . . XD 15 127.457 194.905 115.445 1 36.62 ? CM1 SPO 104 3 1 HETATM 2 O O1 SPO . . . XD 15 127.149 194.039 114.356 1 36.62 ? O1 SPO 104 3 1 HETATM 3 C C1 SPO . . . XD 15 125.81 193.898 113.887 1 36.62 ? C1 SPO 104 3 1 HETATM 4 C C2 SPO . . . XD 15 124.951 193.32 115.004 1 36.62 ? C2 SPO 104 3 1 HETATM 5 C C3 SPO . . . XD 15 125.286 195.266 113.473 1 36.62 ? C3 SPO 104 3 1 HETATM 6 C C4 SPO . . . XD 15 125.839 192.953 112.691 1 36.62 ? C4 SPO 104 3 1 HETATM 7 C C5 SPO . . . XD 15 126.812 191.851 113.027 1 36.62 ? C5 SPO 104 3 1 HETATM 8 C C6 SPO . . . XD 15 126.586 190.572 112.739 1 36.62 ? C6 SPO 104 3 1 HETATM 9 C C7 SPO . . . XD 15 127.63 189.612 113.144 1 36.62 ? C7 SPO 104 3 1 HETATM 10 C C8 SPO . . . XD 15 128.456 189.929 114.35 1 36.62 ? C8 SPO 104 3 1 HETATM 11 C C9 SPO . . . XD 15 127.851 188.473 112.48 1 36.62 ? C9 SPO 104 3 1 HETATM 12 C C10 SPO . . . XD 15 128.903 187.575 112.947 1 36.62 ? C10 SPO 104 3 1 HETATM 13 C C11 SPO . . . XD 15 128.849 186.286 112.638 1 36.62 ? C11 SPO 104 3 1 HETATM 14 C C12 SPO . . . XD 15 129.891 185.348 113.089 1 36.62 ? C12 SPO 104 3 1 HETATM 15 C C13 SPO . . . XD 15 131.126 185.854 113.769 1 36.62 ? C13 SPO 104 3 1 HETATM 16 C C14 SPO . . . XD 15 129.7 184.04 112.872 1 36.62 ? C14 SPO 104 3 1 HETATM 17 C C15 SPO . . . XD 15 130.652 182.998 113.255 1 36.62 ? C15 SPO 104 3 1 HETATM 18 C C16 SPO . . . XD 15 130.358 181.773 112.831 1 36.62 ? C16 SPO 104 3 1 HETATM 19 C C17 SPO . . . XD 15 131.183 180.581 113.088 1 36.62 ? C17 SPO 104 3 1 HETATM 20 C C18 SPO . . . XD 15 132.508 180.693 113.776 1 36.62 ? C18 SPO 104 3 1 HETATM 21 C C19 SPO . . . XD 15 130.705 179.397 112.682 1 36.62 ? C19 SPO 104 3 1 HETATM 22 C C20 SPO . . . XD 15 131.425 178.143 112.852 1 36.62 ? C20 SPO 104 3 1 HETATM 23 C C21 SPO . . . XD 15 130.826 176.995 112.546 1 36.62 ? C21 SPO 104 3 1 HETATM 24 C C22 SPO . . . XD 15 131.571 175.752 112.692 1 36.62 ? C22 SPO 104 3 1 HETATM 25 C C23 SPO . . . XD 15 131.067 174.534 112.448 1 36.62 ? C23 SPO 104 3 1 HETATM 26 C C24 SPO . . . XD 15 129.649 174.349 112.003 1 36.62 ? C24 SPO 104 3 1 HETATM 27 C C25 SPO . . . XD 15 131.968 173.378 112.62 1 36.62 ? C25 SPO 104 3 1 HETATM 28 C C26 SPO . . . XD 15 131.593 172.111 112.486 1 36.62 ? C26 SPO 104 3 1 HETATM 29 C C27 SPO . . . XD 15 132.621 171.097 112.682 1 36.62 ? C27 SPO 104 3 1 HETATM 30 C C28 SPO . . . XD 15 132.341 169.794 112.769 1 36.62 ? C28 SPO 104 3 1 HETATM 31 C C29 SPO . . . XD 15 130.926 169.315 112.678 1 36.62 ? C29 SPO 104 3 1 HETATM 32 C C30 SPO . . . XD 15 133.467 168.809 112.973 1 36.62 ? C30 SPO 104 3 1 HETATM 33 C C31 SPO . . . XD 15 133.611 167.92 111.744 1 36.62 ? C31 SPO 104 3 1 HETATM 34 C C32 SPO . . . XD 15 134.805 167.015 111.928 1 36.62 ? C32 SPO 104 3 1 HETATM 35 C C33 SPO . . . XD 15 134.68 165.685 111.85 1 36.62 ? C33 SPO 104 3 1 HETATM 36 C C34 SPO . . . XD 15 133.339 165.076 111.588 1 36.62 ? C34 SPO 104 3 1 HETATM 37 C C35 SPO . . . XD 15 135.889 164.801 112.046 1 36.62 ? C35 SPO 104 3 1 HETATM 38 C C36 SPO . . . XD 15 136.093 163.909 110.831 1 36.62 ? C36 SPO 104 3 1 HETATM 39 C C37 SPO . . . XD 15 137.113 162.843 111.156 1 36.62 ? C37 SPO 104 3 1 HETATM 40 C C38 SPO . . . XD 15 136.829 161.551 110.942 1 36.62 ? C38 SPO 104 3 1 HETATM 41 C C39 SPO . . . XD 15 137.844 160.499 111.265 1 36.62 ? C39 SPO 104 3 1 HETATM 42 C C40 SPO . . . XD 15 135.497 161.162 110.375 1 36.62 ? C40 SPO 104 3 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 42 #