data_7F0N # _model_server_result.job_id xEi40NZ9g_gk2iKEnglBhA _model_server_result.datetime_utc '2024-11-25 16:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":103}' # _entry.id 7F0N # _exptl.entry_id 7F0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.12 _cell.angle_gamma 90 _cell.entry_id 7F0N _cell.length_a 48.01 _cell.length_b 39.06 _cell.length_c 35.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 2 A GLN 2 1_555 H NA NA . A NA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc2 A O ALA 28 A ALA 28 1_555 K NA NA . A NA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.997 ? metalc ? metalc3 A O ASP 32 A ASP 32 1_555 G NA NA . A NA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.161 ? metalc ? metalc4 A OD1 ASP 32 A ASP 32 1_555 K NA NA . A NA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc5 A O LYS 33 A LYS 33 1_555 J NA NA . A NA 109 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc6 A OE2 GLU 34 A GLU 34 1_555 M MG MG . A MG 112 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc7 A OG SER 57 A SER 57 1_555 E NA NA . A NA 104 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc8 A OG SER 57 A SER 57 1_555 E NA NA . A NA 104 2_555 ? A ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc9 A OD2 ASP 58 A ASP 58 1_555 C NA NA . A NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc10 A OE2 GLU 64 A GLU 64 1_555 H NA NA . A NA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc11 A OE1 GLU 64 A GLU 64 1_555 I NA NA . A NA 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc12 A O GLU 64 A GLU 64 1_555 L K K . A K 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc13 A OG1 THR 66 A THR 66 1_555 L K K . A K 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc14 A O ARG 74 A ARG 74 1_555 M MG MG . A MG 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc15 A O GLY 75 A GLY 75 1_555 M MG MG . A MG 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.716 ? metalc ? metalc16 B NA NA . A NA 101 1_555 N O HOH . A HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc17 B NA NA . A NA 101 1_555 N O HOH . A HOH 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc18 B NA NA . A NA 101 1_555 N O HOH . A HOH 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc19 B NA NA . A NA 101 1_555 N O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc20 B NA NA . A NA 101 1_555 N O HOH . A HOH 342 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc21 B NA NA . A NA 101 1_555 N O HOH . A HOH 362 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.093 ? metalc ? metalc22 C NA NA . A NA 102 1_555 N O HOH . A HOH 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? metalc ? metalc23 C NA NA . A NA 102 1_555 N O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc24 E NA NA . A NA 104 1_555 N O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc25 E NA NA . A NA 104 1_555 N O HOH . A HOH 358 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc26 F NA NA . A NA 105 1_555 N O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc27 G NA NA . A NA 106 1_555 N O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc28 G NA NA . A NA 106 1_555 N O HOH . A HOH 348 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc29 H NA NA . A NA 107 1_555 N O HOH . A HOH 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc30 I NA NA . A NA 108 1_555 N O HOH . A HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc31 I NA NA . A NA 108 1_555 N O HOH . A HOH 323 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc32 J NA NA . A NA 109 1_555 N O HOH . A HOH 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc33 J NA NA . A NA 109 1_555 N O HOH . A HOH 263 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc34 J NA NA . A NA 109 1_555 N O HOH . A HOH 356 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc35 K NA NA . A NA 110 1_555 N O HOH . A HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc36 K NA NA . A NA 110 1_555 N O HOH . A HOH 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc37 L K K . A K 111 1_555 N O HOH . A HOH 209 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.26 ? metalc ? metalc38 L K K . A K 111 1_555 N O HOH . A HOH 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? metalc ? metalc39 L K K . A K 111 1_555 N O HOH . A HOH 261 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc40 L K K . A K 111 1_555 N O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc41 M MG MG . A MG 112 1_555 N O HOH . A HOH 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7F0N _atom_sites.fract_transf_matrix[1][1] 0.020829 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001135 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 101 1 NA NA . C 2 NA A 1 102 2 NA NA . D 2 NA A 1 103 3 NA NA . E 2 NA A 1 104 4 NA NA . F 2 NA A 1 105 5 NA NA . G 2 NA A 1 106 6 NA NA . H 2 NA A 1 107 7 NA NA . I 2 NA A 1 108 8 NA NA . J 2 NA A 1 109 9 NA NA . K 2 NA A 1 110 10 NA NA . L 3 K A 1 111 1 K K . M 4 MG A 1 112 1 MG MG . N 5 HOH A 1 201 174 HOH HOH . N 5 HOH A 2 202 149 HOH HOH . N 5 HOH A 3 203 159 HOH HOH . N 5 HOH A 4 204 145 HOH HOH . N 5 HOH A 5 205 9 HOH HOH . N 5 HOH A 6 206 154 HOH HOH . N 5 HOH A 7 207 121 HOH HOH . N 5 HOH A 8 208 168 HOH HOH . N 5 HOH A 9 209 56 HOH HOH . N 5 HOH A 10 210 132 HOH HOH . N 5 HOH A 11 211 45 HOH HOH . N 5 HOH A 12 212 153 HOH HOH . N 5 HOH A 13 213 100 HOH HOH . N 5 HOH A 14 214 142 HOH HOH . N 5 HOH A 15 215 106 HOH HOH . N 5 HOH A 16 216 130 HOH HOH . N 5 HOH A 17 217 117 HOH HOH . N 5 HOH A 18 218 163 HOH HOH . N 5 HOH A 19 219 141 HOH HOH . N 5 HOH A 20 220 74 HOH HOH . N 5 HOH A 21 221 58 HOH HOH . N 5 HOH A 22 222 77 HOH HOH . N 5 HOH A 23 223 138 HOH HOH . N 5 HOH A 24 224 155 HOH HOH . N 5 HOH A 25 225 166 HOH HOH . N 5 HOH A 26 226 55 HOH HOH . N 5 HOH A 27 227 11 HOH HOH . N 5 HOH A 28 228 75 HOH HOH . N 5 HOH A 29 229 30 HOH HOH . N 5 HOH A 30 230 69 HOH HOH . N 5 HOH A 31 231 173 HOH HOH . N 5 HOH A 32 232 139 HOH HOH . N 5 HOH A 33 233 90 HOH HOH . N 5 HOH A 34 234 22 HOH HOH . N 5 HOH A 35 235 110 HOH HOH . N 5 HOH A 36 236 4 HOH HOH . N 5 HOH A 37 237 13 HOH HOH . N 5 HOH A 38 238 135 HOH HOH . N 5 HOH A 39 239 39 HOH HOH . N 5 HOH A 40 240 51 HOH HOH . N 5 HOH A 41 241 62 HOH HOH . N 5 HOH A 42 242 3 HOH HOH . N 5 HOH A 43 243 133 HOH HOH . N 5 HOH A 44 244 16 HOH HOH . N 5 HOH A 45 245 109 HOH HOH . N 5 HOH A 46 246 108 HOH HOH . N 5 HOH A 47 247 73 HOH HOH . N 5 HOH A 48 248 80 HOH HOH . N 5 HOH A 49 249 1 HOH HOH . N 5 HOH A 50 250 122 HOH HOH . N 5 HOH A 51 251 41 HOH HOH . N 5 HOH A 52 252 52 HOH HOH . N 5 HOH A 53 253 18 HOH HOH . N 5 HOH A 54 254 67 HOH HOH . N 5 HOH A 55 255 34 HOH HOH . N 5 HOH A 56 256 137 HOH HOH . N 5 HOH A 57 257 65 HOH HOH . N 5 HOH A 58 258 28 HOH HOH . N 5 HOH A 59 259 88 HOH HOH . N 5 HOH A 60 260 101 HOH HOH . N 5 HOH A 61 261 2 HOH HOH . N 5 HOH A 62 262 63 HOH HOH . N 5 HOH A 63 263 140 HOH HOH . N 5 HOH A 64 264 32 HOH HOH . N 5 HOH A 65 265 49 HOH HOH . N 5 HOH A 66 266 47 HOH HOH . N 5 HOH A 67 267 93 HOH HOH . N 5 HOH A 68 268 103 HOH HOH . N 5 HOH A 69 269 8 HOH HOH . N 5 HOH A 70 270 131 HOH HOH . N 5 HOH A 71 271 66 HOH HOH . N 5 HOH A 72 272 81 HOH HOH . N 5 HOH A 73 273 91 HOH HOH . N 5 HOH A 74 274 26 HOH HOH . N 5 HOH A 75 275 35 HOH HOH . N 5 HOH A 76 276 114 HOH HOH . N 5 HOH A 77 277 82 HOH HOH . N 5 HOH A 78 278 147 HOH HOH . N 5 HOH A 79 279 136 HOH HOH . N 5 HOH A 80 280 123 HOH HOH . N 5 HOH A 81 281 20 HOH HOH . N 5 HOH A 82 282 118 HOH HOH . N 5 HOH A 83 283 150 HOH HOH . N 5 HOH A 84 284 76 HOH HOH . N 5 HOH A 85 285 10 HOH HOH . N 5 HOH A 86 286 12 HOH HOH . N 5 HOH A 87 287 7 HOH HOH . N 5 HOH A 88 288 5 HOH HOH . N 5 HOH A 89 289 172 HOH HOH . N 5 HOH A 90 290 61 HOH HOH . N 5 HOH A 91 291 17 HOH HOH . N 5 HOH A 92 292 116 HOH HOH . N 5 HOH A 93 293 84 HOH HOH . N 5 HOH A 94 294 83 HOH HOH . N 5 HOH A 95 295 15 HOH HOH . N 5 HOH A 96 296 57 HOH HOH . N 5 HOH A 97 297 40 HOH HOH . N 5 HOH A 98 298 60 HOH HOH . N 5 HOH A 99 299 14 HOH HOH . N 5 HOH A 100 300 29 HOH HOH . N 5 HOH A 101 301 134 HOH HOH . N 5 HOH A 102 302 169 HOH HOH . N 5 HOH A 103 303 94 HOH HOH . N 5 HOH A 104 304 125 HOH HOH . N 5 HOH A 105 305 120 HOH HOH . N 5 HOH A 106 306 160 HOH HOH . N 5 HOH A 107 307 162 HOH HOH . N 5 HOH A 108 308 102 HOH HOH . N 5 HOH A 109 309 24 HOH HOH . N 5 HOH A 110 310 42 HOH HOH . N 5 HOH A 111 311 124 HOH HOH . N 5 HOH A 112 312 99 HOH HOH . N 5 HOH A 113 313 170 HOH HOH . N 5 HOH A 114 314 156 HOH HOH . N 5 HOH A 115 315 97 HOH HOH . N 5 HOH A 116 316 89 HOH HOH . N 5 HOH A 117 317 92 HOH HOH . N 5 HOH A 118 318 43 HOH HOH . N 5 HOH A 119 319 127 HOH HOH . N 5 HOH A 120 320 79 HOH HOH . N 5 HOH A 121 321 165 HOH HOH . N 5 HOH A 122 322 98 HOH HOH . N 5 HOH A 123 323 161 HOH HOH . N 5 HOH A 124 324 37 HOH HOH . N 5 HOH A 125 325 129 HOH HOH . N 5 HOH A 126 326 146 HOH HOH . N 5 HOH A 127 327 167 HOH HOH . N 5 HOH A 128 328 86 HOH HOH . N 5 HOH A 129 329 115 HOH HOH . N 5 HOH A 130 330 176 HOH HOH . N 5 HOH A 131 331 71 HOH HOH . N 5 HOH A 132 332 164 HOH HOH . N 5 HOH A 133 333 157 HOH HOH . N 5 HOH A 134 334 113 HOH HOH . N 5 HOH A 135 335 175 HOH HOH . N 5 HOH A 136 336 19 HOH HOH . N 5 HOH A 137 337 148 HOH HOH . N 5 HOH A 138 338 158 HOH HOH . N 5 HOH A 139 339 119 HOH HOH . N 5 HOH A 140 340 107 HOH HOH . N 5 HOH A 141 341 151 HOH HOH . N 5 HOH A 142 342 25 HOH HOH . N 5 HOH A 143 343 126 HOH HOH . N 5 HOH A 144 344 36 HOH HOH . N 5 HOH A 145 345 152 HOH HOH . N 5 HOH A 146 346 33 HOH HOH . N 5 HOH A 147 347 21 HOH HOH . N 5 HOH A 148 348 48 HOH HOH . N 5 HOH A 149 349 64 HOH HOH . N 5 HOH A 150 350 27 HOH HOH . N 5 HOH A 151 351 6 HOH HOH . N 5 HOH A 152 352 50 HOH HOH . N 5 HOH A 153 353 68 HOH HOH . N 5 HOH A 154 354 144 HOH HOH . N 5 HOH A 155 355 96 HOH HOH . N 5 HOH A 156 356 143 HOH HOH . N 5 HOH A 157 357 112 HOH HOH . N 5 HOH A 158 358 23 HOH HOH . N 5 HOH A 159 359 31 HOH HOH . N 5 HOH A 160 360 46 HOH HOH . N 5 HOH A 161 361 95 HOH HOH . N 5 HOH A 162 362 59 HOH HOH . N 5 HOH A 163 363 38 HOH HOH . N 5 HOH A 164 364 53 HOH HOH . N 5 HOH A 165 365 85 HOH HOH . N 5 HOH A 166 366 78 HOH HOH . N 5 HOH A 167 367 128 HOH HOH . N 5 HOH A 168 368 87 HOH HOH . N 5 HOH A 169 369 104 HOH HOH . N 5 HOH A 170 370 44 HOH HOH . N 5 HOH A 171 371 171 HOH HOH . N 5 HOH A 172 372 54 HOH HOH . N 5 HOH A 173 373 105 HOH HOH . N 5 HOH A 174 374 111 HOH HOH . N 5 HOH A 175 375 70 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.553 _atom_site.Cartn_y -4.216 _atom_site.Cartn_z 16.202 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 103 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #