data_7F1E # _model_server_result.job_id R1nOS_g-JXEzBR4GOyI_6w _model_server_result.datetime_utc '2024-10-25 20:37:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f1e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7F1E # _exptl.entry_id 7F1E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.437 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description S-ADENOSYLMETHIONINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F1E _cell.length_a 83.457 _cell.length_b 83.457 _cell.length_c 129.686 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F1E _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C15 H22 N6 O5 S' _chem_comp.formula_weight 398.437 _chem_comp.id SAM _chem_comp.mon_nstd_flag . _chem_comp.name S-ADENOSYLMETHIONINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAM sing 277 n n N HN1 SAM sing 278 n n N HN2 SAM sing 279 n n CA C SAM sing 280 n n CA CB SAM sing 281 n n CA HA SAM sing 282 n n C O SAM doub 283 n n C OXT SAM sing 284 n n CB CG SAM sing 285 n n CB HB1 SAM sing 286 n n CB HB2 SAM sing 287 n n CG SD SAM sing 288 n n CG HG1 SAM sing 289 n n CG HG2 SAM sing 290 n n SD CE SAM sing 291 n n SD C5' SAM sing 292 n n CE HE1 SAM sing 293 n n CE HE2 SAM sing 294 n n CE HE3 SAM sing 295 n n C5' C4' SAM sing 296 n n C5' "H5'1" SAM sing 297 n n C5' "H5'2" SAM sing 298 n n C4' O4' SAM sing 299 n n C4' C3' SAM sing 300 n n C4' H4' SAM sing 301 n n O4' C1' SAM sing 302 n n C3' O3' SAM sing 303 n n C3' C2' SAM sing 304 n n C3' H3' SAM sing 305 n n O3' HO3' SAM sing 306 n n C2' O2' SAM sing 307 n n C2' C1' SAM sing 308 n n C2' H2' SAM sing 309 n n O2' HO2' SAM sing 310 n n C1' N9 SAM sing 311 n n C1' H1' SAM sing 312 n n N9 C8 SAM sing 313 n y N9 C4 SAM sing 314 n y C8 N7 SAM doub 315 n y C8 H8 SAM sing 316 n n N7 C5 SAM sing 317 n y C5 C6 SAM sing 318 n y C5 C4 SAM doub 319 n y C6 N6 SAM sing 320 n n C6 N1 SAM doub 321 n y N6 HN61 SAM sing 322 n n N6 HN62 SAM sing 323 n n N1 C2 SAM sing 324 n y C2 N3 SAM doub 325 n y C2 H2 SAM sing 326 n n N3 C4 SAM sing 327 n y # _atom_sites.entry_id 7F1E _atom_sites.fract_transf_matrix[1][1] 0.011982 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAM A 1 301 301 SAM SAM . D 2 SAM B 1 301 301 SAM SAM . E 3 HOH A 1 401 35 HOH HOH . E 3 HOH A 2 402 29 HOH HOH . E 3 HOH A 3 403 44 HOH HOH . E 3 HOH A 4 404 30 HOH HOH . E 3 HOH A 5 405 28 HOH HOH . E 3 HOH A 6 406 1 HOH HOH . E 3 HOH A 7 407 11 HOH HOH . E 3 HOH A 8 408 2 HOH HOH . E 3 HOH A 9 409 24 HOH HOH . E 3 HOH A 10 410 4 HOH HOH . E 3 HOH A 11 411 12 HOH HOH . E 3 HOH A 12 412 43 HOH HOH . E 3 HOH A 13 413 47 HOH HOH . E 3 HOH A 14 414 10 HOH HOH . E 3 HOH A 15 415 6 HOH HOH . E 3 HOH A 16 416 34 HOH HOH . E 3 HOH A 17 417 17 HOH HOH . E 3 HOH A 18 418 8 HOH HOH . E 3 HOH A 19 419 5 HOH HOH . E 3 HOH A 20 420 21 HOH HOH . E 3 HOH A 21 421 32 HOH HOH . E 3 HOH A 22 422 9 HOH HOH . E 3 HOH A 23 423 53 HOH HOH . E 3 HOH A 24 424 56 HOH HOH . E 3 HOH A 25 425 22 HOH HOH . E 3 HOH A 26 426 46 HOH HOH . E 3 HOH A 27 427 55 HOH HOH . E 3 HOH A 28 428 54 HOH HOH . E 3 HOH A 29 429 59 HOH HOH . E 3 HOH A 30 430 62 HOH HOH . E 3 HOH A 31 431 60 HOH HOH . F 3 HOH B 1 401 3 HOH HOH . F 3 HOH B 2 402 33 HOH HOH . F 3 HOH B 3 403 25 HOH HOH . F 3 HOH B 4 404 50 HOH HOH . F 3 HOH B 5 405 23 HOH HOH . F 3 HOH B 6 406 18 HOH HOH . F 3 HOH B 7 407 19 HOH HOH . F 3 HOH B 8 408 65 HOH HOH . F 3 HOH B 9 409 52 HOH HOH . F 3 HOH B 10 410 38 HOH HOH . F 3 HOH B 11 411 51 HOH HOH . F 3 HOH B 12 412 57 HOH HOH . F 3 HOH B 13 413 42 HOH HOH . F 3 HOH B 14 414 7 HOH HOH . F 3 HOH B 15 415 61 HOH HOH . F 3 HOH B 16 416 66 HOH HOH . F 3 HOH B 17 417 58 HOH HOH . F 3 HOH B 18 418 20 HOH HOH . F 3 HOH B 19 419 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAM . . . C 2 39.466 -23.15 6.805 1 43.17 ? N SAM 301 A 1 HETATM 2 C CA SAM . . . C 2 40.887 -22.843 6.921 1 41.93 ? CA SAM 301 A 1 HETATM 3 C C SAM . . . C 2 41.662 -23.48 5.785 1 44.94 ? C SAM 301 A 1 HETATM 4 O O SAM . . . C 2 41.082 -23.768 4.738 1 47.28 ? O SAM 301 A 1 HETATM 5 O OXT SAM . . . C 2 42.87 -23.704 5.886 1 47.93 ? OXT SAM 301 A 1 HETATM 6 C CB SAM . . . C 2 41.455 -23.287 8.27 1 41.19 ? CB SAM 301 A 1 HETATM 7 C CG SAM . . . C 2 41.205 -24.708 8.757 1 44.25 ? CG SAM 301 A 1 HETATM 8 S SD SAM . . . C 2 42.081 -25.013 10.323 1 49.44 ? SD SAM 301 A 1 HETATM 9 C CE SAM . . . C 2 42.341 -26.799 10.257 1 52.15 ? CE SAM 301 A 1 HETATM 10 C C5' SAM . . . C 2 40.738 -24.961 11.546 1 44.87 ? C5' SAM 301 A 1 HETATM 11 C C4' SAM . . . C 2 40.453 -23.546 12.029 1 39.22 ? C4' SAM 301 A 1 HETATM 12 O O4' SAM . . . C 2 39.15 -23.485 12.562 1 36.24 ? O4' SAM 301 A 1 HETATM 13 C C3' SAM . . . C 2 41.395 -23.097 13.136 1 39.66 ? C3' SAM 301 A 1 HETATM 14 O O3' SAM . . . C 2 42.108 -21.964 12.687 1 40.47 ? O3' SAM 301 A 1 HETATM 15 C C2' SAM . . . C 2 40.499 -22.747 14.316 1 35.87 ? C2' SAM 301 A 1 HETATM 16 O O2' SAM . . . C 2 40.928 -21.573 14.975 1 33.73 ? O2' SAM 301 A 1 HETATM 17 C C1' SAM . . . C 2 39.136 -22.587 13.666 1 32.77 ? C1' SAM 301 A 1 HETATM 18 N N9 SAM . . . C 2 37.991 -22.812 14.584 1 26.67 ? N9 SAM 301 A 1 HETATM 19 C C8 SAM . . . C 2 37.687 -23.95 15.289 1 23.83 ? C8 SAM 301 A 1 HETATM 20 N N7 SAM . . . C 2 36.542 -23.724 15.985 1 25.63 ? N7 SAM 301 A 1 HETATM 21 C C5 SAM . . . C 2 36.102 -22.469 15.742 1 26.02 ? C5 SAM 301 A 1 HETATM 22 C C6 SAM . . . C 2 34.994 -21.742 16.19 1 28.59 ? C6 SAM 301 A 1 HETATM 23 N N6 SAM . . . C 2 34.104 -22.267 17.045 1 26.72 ? N6 SAM 301 A 1 HETATM 24 N N1 SAM . . . C 2 34.811 -20.454 15.73 1 27.21 ? N1 SAM 301 A 1 HETATM 25 C C2 SAM . . . C 2 35.719 -19.895 14.856 1 24.64 ? C2 SAM 301 A 1 HETATM 26 N N3 SAM . . . C 2 36.813 -20.621 14.43 1 22.51 ? N3 SAM 301 A 1 HETATM 27 C C4 SAM . . . C 2 37.005 -21.889 14.858 1 24.67 ? C4 SAM 301 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 27 #