data_7F2S # _model_server_result.job_id Pvu5s3WND88T7RjbD5w58A _model_server_result.datetime_utc '2024-11-29 17:24:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f2s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":311}' # _entry.id 7F2S # _exptl.entry_id 7F2S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7F2S _cell.length_a 76.058 _cell.length_b 76.058 _cell.length_c 378.891 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F2S _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 L N N ? 5 M N N ? 5 N N N ? 5 U N N ? 5 V N N ? 5 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf2 A SG CYS 143 A CYS 143 1_555 A SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 92 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 138 B CYS 138 1_555 B SG CYS 198 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7F2S _atom_sites.fract_transf_matrix[1][1] 0.013148 _atom_sites.fract_transf_matrix[1][2] 0.007591 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 301 1 GOL GOL . D 3 GOL A 1 302 2 GOL GOL . E 3 GOL A 1 303 4 GOL GOL . F 3 GOL A 1 304 6 GOL GOL . G 3 GOL A 1 305 7 GOL GOL . H 3 GOL A 1 306 8 GOL GOL . I 3 GOL A 1 307 9 GOL GOL . J 4 SO4 A 1 308 3 SO4 SO4 . K 4 SO4 A 1 309 4 SO4 SO4 . L 5 EDO A 1 310 3 EDO EDO . M 5 EDO A 1 311 5 EDO EDO . N 5 EDO A 1 312 6 EDO EDO . O 6 CL A 1 313 1 CL CL . P 3 GOL B 1 301 3 GOL GOL . Q 3 GOL B 1 302 5 GOL GOL . R 4 SO4 B 1 303 1 SO4 SO4 . S 4 SO4 B 1 304 2 SO4 SO4 . T 4 SO4 B 1 305 5 SO4 SO4 . U 5 EDO B 1 306 1 EDO EDO . V 5 EDO B 1 307 2 EDO EDO . W 5 EDO B 1 308 4 EDO EDO . X 7 HOH A 1 401 8 HOH HOH . X 7 HOH A 2 402 5 HOH HOH . X 7 HOH A 3 403 14 HOH HOH . X 7 HOH A 4 404 16 HOH HOH . X 7 HOH A 5 405 23 HOH HOH . X 7 HOH A 6 406 28 HOH HOH . X 7 HOH A 7 407 10 HOH HOH . X 7 HOH A 8 408 19 HOH HOH . X 7 HOH A 9 409 7 HOH HOH . X 7 HOH A 10 410 11 HOH HOH . X 7 HOH A 11 411 18 HOH HOH . X 7 HOH A 12 412 12 HOH HOH . X 7 HOH A 13 413 15 HOH HOH . X 7 HOH A 14 414 34 HOH HOH . X 7 HOH A 15 415 3 HOH HOH . X 7 HOH A 16 416 2 HOH HOH . X 7 HOH A 17 417 25 HOH HOH . X 7 HOH A 18 418 31 HOH HOH . X 7 HOH A 19 419 1 HOH HOH . X 7 HOH A 20 420 6 HOH HOH . X 7 HOH A 21 421 17 HOH HOH . X 7 HOH A 22 422 13 HOH HOH . X 7 HOH A 23 423 33 HOH HOH . X 7 HOH A 24 424 27 HOH HOH . X 7 HOH A 25 425 22 HOH HOH . X 7 HOH A 26 426 37 HOH HOH . X 7 HOH A 27 427 32 HOH HOH . X 7 HOH A 28 428 26 HOH HOH . Y 7 HOH B 1 401 24 HOH HOH . Y 7 HOH B 2 402 4 HOH HOH . Y 7 HOH B 3 403 36 HOH HOH . Y 7 HOH B 4 404 9 HOH HOH . Y 7 HOH B 5 405 29 HOH HOH . Y 7 HOH B 6 406 35 HOH HOH . Y 7 HOH B 7 407 21 HOH HOH . Y 7 HOH B 8 408 20 HOH HOH . Y 7 HOH B 9 409 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 5 29.527 31.202 -57.79 1 108.18 ? C1 EDO 311 A 1 HETATM 2 O O1 EDO . . . M 5 29.526 29.912 -57.018 1 112.38 ? O1 EDO 311 A 1 HETATM 3 C C2 EDO . . . M 5 29.632 30.71 -59.254 1 113.18 ? C2 EDO 311 A 1 HETATM 4 O O2 EDO . . . M 5 30.087 29.253 -59.189 1 116.24 ? O2 EDO 311 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #