data_7F35 # _model_server_result.job_id WWWMgNLl2GWaIH_UbNMKEg _model_server_result.datetime_utc '2024-11-04 23:30:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f35 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":301}' # _entry.id 7F35 # _exptl.entry_id 7F35 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.394 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F35 _cell.length_a 184.071 _cell.length_b 184.071 _cell.length_c 100.66 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F35 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,N,O,P,KA,LA 1 1 C,D,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,MA,NA 2 1 E,F,DA,EA,FA,GA,HA,IA,JA,OA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 Q N N ? 3 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 21 1_555 A SG CYS 92 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf2 A SG CYS 138 A CYS 136 1_555 A SG CYS 198 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? disulf ? disulf4 B SG CYS 143 B CYS 143 1_555 B SG CYS 198 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf5 C SG CYS 23 C CYS 21 1_555 C SG CYS 92 C CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf6 C SG CYS 138 C CYS 136 1_555 C SG CYS 198 C CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf8 D SG CYS 143 D CYS 143 1_555 D SG CYS 198 D CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf9 E SG CYS 23 E CYS 21 1_555 E SG CYS 92 E CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf10 E SG CYS 138 E CYS 136 1_555 E SG CYS 198 E CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf12 F SG CYS 143 F CYS 143 1_555 F SG CYS 198 F CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 B OG SER 17 B SER 17 1_555 O NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.076 ? metalc ? metalc2 D OG SER 25 D SER 25 1_555 BA NA NA . D NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc3 D OE1 GLU 46 D GLU 46 1_555 CA NA NA . D NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? # _chem_comp.formula 'C19 H22 F N3 O4' _chem_comp.formula_weight 375.394 _chem_comp.id GFN _chem_comp.mon_nstd_flag . _chem_comp.name '1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Gatifloxacin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 GFN sing 112 n n N07 C02 GFN sing 113 n n N07 C06 GFN sing 114 n n C02 C03 GFN sing 115 n n C06 C05 GFN sing 116 n n C03 N04 GFN sing 117 n n C15 O14 GFN sing 118 n n C05 N04 GFN sing 119 n n O14 C13 GFN sing 120 n n C25 C24 GFN sing 121 n n C25 C26 GFN sing 122 n n N04 C08 GFN sing 123 n n C24 C26 GFN sing 124 n n C24 N16 GFN sing 125 n n C13 C08 GFN doub 126 n y C13 C12 GFN sing 127 n y C08 C09 GFN sing 128 n y N16 C12 GFN sing 129 n n N16 C17 GFN sing 130 n n C12 C11 GFN doub 131 n y C09 F27 GFN sing 132 n n C09 C10 GFN doub 133 n y C17 C18 GFN doub 134 n n C11 C10 GFN sing 135 n y C11 C19 GFN sing 136 n n C18 C19 GFN sing 137 n n C18 C21 GFN sing 138 n n C19 O20 GFN doub 139 n n O22 C21 GFN doub 140 n n C21 O23 GFN sing 141 n n C01 H011 GFN sing 142 n n C01 H012 GFN sing 143 n n C01 H013 GFN sing 144 n n C02 H021 GFN sing 145 n n C03 H032 GFN sing 146 n n C03 H031 GFN sing 147 n n C05 H051 GFN sing 148 n n C05 H052 GFN sing 149 n n C06 H062 GFN sing 150 n n C06 H061 GFN sing 151 n n N07 H071 GFN sing 152 n n C10 H101 GFN sing 153 n n C15 H151 GFN sing 154 n n C15 H153 GFN sing 155 n n C15 H152 GFN sing 156 n n C17 H171 GFN sing 157 n n O23 H2 GFN sing 158 n n C24 H241 GFN sing 159 n n C25 H252 GFN sing 160 n n C25 H251 GFN sing 161 n n C26 H262 GFN sing 162 n n C26 H261 GFN sing 163 n n # _atom_sites.entry_id 7F35 _atom_sites.fract_transf_matrix[1][1] 0.005433 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005433 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GFN A 1 301 2 GFN LIG . H 4 EDO A 1 302 1 EDO EDO . I 4 EDO A 1 303 3 EDO EDO . J 5 NA A 1 304 8 NA NA . K 6 SO4 B 1 301 6 SO4 SO4 . L 4 EDO B 1 302 5 EDO EDO . M 4 EDO B 1 303 6 EDO EDO . N 4 EDO B 1 304 8 EDO EDO . O 5 NA B 1 305 6 NA NA . P 5 NA B 1 306 7 NA NA . Q 3 GFN C 1 301 1 GFN LIG . R 6 SO4 C 1 302 5 SO4 SO4 . S 6 SO4 C 1 303 7 SO4 SO4 . T 7 GOL C 1 304 1 GOL GOL . U 7 GOL C 1 305 2 GOL GOL . V 4 EDO C 1 306 4 EDO EDO . W 5 NA C 1 307 1 NA NA . X 5 NA C 1 308 2 NA NA . Y 8 CL C 1 309 1 CL CL . Z 6 SO4 D 1 301 4 SO4 SO4 . AA 5 NA D 1 302 3 NA NA . BA 5 NA D 1 303 4 NA NA . CA 5 NA D 1 304 5 NA NA . DA 3 GFN E 1 301 3 GFN LIG . EA 6 SO4 F 1 301 1 SO4 SO4 . FA 6 SO4 F 1 302 2 SO4 SO4 . GA 6 SO4 F 1 303 3 SO4 SO4 . HA 9 CIT F 1 304 1 CIT CIT . IA 4 EDO F 1 305 2 EDO EDO . JA 4 EDO F 1 306 7 EDO EDO . KA 10 HOH A 1 401 7 HOH HOH . KA 10 HOH A 2 402 10 HOH HOH . KA 10 HOH A 3 403 16 HOH HOH . KA 10 HOH A 4 404 33 HOH HOH . KA 10 HOH A 5 405 18 HOH HOH . KA 10 HOH A 6 406 31 HOH HOH . KA 10 HOH A 7 407 26 HOH HOH . LA 10 HOH B 1 401 42 HOH HOH . LA 10 HOH B 2 402 25 HOH HOH . LA 10 HOH B 3 403 12 HOH HOH . LA 10 HOH B 4 404 37 HOH HOH . LA 10 HOH B 5 405 44 HOH HOH . LA 10 HOH B 6 406 6 HOH HOH . LA 10 HOH B 7 407 11 HOH HOH . LA 10 HOH B 8 408 43 HOH HOH . LA 10 HOH B 9 409 24 HOH HOH . LA 10 HOH B 10 410 19 HOH HOH . LA 10 HOH B 11 411 27 HOH HOH . MA 10 HOH C 1 401 28 HOH HOH . MA 10 HOH C 2 402 35 HOH HOH . MA 10 HOH C 3 403 21 HOH HOH . MA 10 HOH C 4 404 36 HOH HOH . MA 10 HOH C 5 405 38 HOH HOH . MA 10 HOH C 6 406 22 HOH HOH . MA 10 HOH C 7 407 14 HOH HOH . MA 10 HOH C 8 408 4 HOH HOH . MA 10 HOH C 9 409 45 HOH HOH . MA 10 HOH C 10 410 5 HOH HOH . MA 10 HOH C 11 411 40 HOH HOH . MA 10 HOH C 12 412 29 HOH HOH . NA 10 HOH D 1 401 34 HOH HOH . NA 10 HOH D 2 402 13 HOH HOH . NA 10 HOH D 3 403 2 HOH HOH . NA 10 HOH D 4 404 3 HOH HOH . NA 10 HOH D 5 405 1 HOH HOH . NA 10 HOH D 6 406 23 HOH HOH . NA 10 HOH D 7 407 30 HOH HOH . NA 10 HOH D 8 408 20 HOH HOH . NA 10 HOH D 9 409 9 HOH HOH . NA 10 HOH D 10 410 17 HOH HOH . NA 10 HOH D 11 411 41 HOH HOH . NA 10 HOH D 12 412 15 HOH HOH . NA 10 HOH D 13 413 39 HOH HOH . OA 10 HOH F 1 401 32 HOH HOH . OA 10 HOH F 2 402 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 GFN . . . DA 3 56.514 -46.229 -6.933 1 62.09 ? C01 GFN 301 E 1 HETATM 2 C C02 GFN . . . DA 3 55.837 -45.588 -5.716 1 66.64 ? C02 GFN 301 E 1 HETATM 3 C C03 GFN . . . DA 3 55.709 -46.559 -4.525 1 65.64 ? C03 GFN 301 E 1 HETATM 4 N N04 GFN . . . DA 3 55.042 -45.84 -3.429 1 66 ? N04 GFN 301 E 1 HETATM 5 C C05 GFN . . . DA 3 55.821 -44.662 -3.048 1 65.77 ? C05 GFN 301 E 1 HETATM 6 C C06 GFN . . . DA 3 55.912 -43.721 -4.246 1 69.91 ? C06 GFN 301 E 1 HETATM 7 N N07 GFN . . . DA 3 56.612 -44.398 -5.33 1 64.74 ? N07 GFN 301 E 1 HETATM 8 C C08 GFN . . . DA 3 54.52 -46.652 -2.401 1 69.11 ? C08 GFN 301 E 1 HETATM 9 C C09 GFN . . . DA 3 53.406 -47.426 -2.729 1 68.36 ? C09 GFN 301 E 1 HETATM 10 C C10 GFN . . . DA 3 52.681 -48.044 -1.748 1 69.21 ? C10 GFN 301 E 1 HETATM 11 C C11 GFN . . . DA 3 53.201 -48.12 -0.466 1 68.89 ? C11 GFN 301 E 1 HETATM 12 C C12 GFN . . . DA 3 54.293 -47.317 -0.075 1 69.7 ? C12 GFN 301 E 1 HETATM 13 C C13 GFN . . . DA 3 55.071 -46.741 -1.108 1 68.76 ? C13 GFN 301 E 1 HETATM 14 O O14 GFN . . . DA 3 56.348 -46.305 -0.892 1 69.1 ? O14 GFN 301 E 1 HETATM 15 C C15 GFN . . . DA 3 57.446 -47.222 -0.942 1 68.97 ? C15 GFN 301 E 1 HETATM 16 N N16 GFN . . . DA 3 54.564 -47.262 1.298 1 73.57 ? N16 GFN 301 E 1 HETATM 17 C C17 GFN . . . DA 3 53.976 -48.054 2.189 1 72.09 ? C17 GFN 301 E 1 HETATM 18 C C18 GFN . . . DA 3 53.012 -48.956 1.879 1 71.99 ? C18 GFN 301 E 1 HETATM 19 C C19 GFN . . . DA 3 52.528 -49.002 0.493 1 73.56 ? C19 GFN 301 E 1 HETATM 20 O O20 GFN . . . DA 3 51.597 -49.71 0.123 1 71.47 ? O20 GFN 301 E 1 HETATM 21 C C21 GFN . . . DA 3 52.477 -49.789 2.951 1 78.99 ? C21 GFN 301 E 1 HETATM 22 O O22 GFN . . . DA 3 52.562 -49.373 4.097 1 84.17 ? O22 GFN 301 E 1 HETATM 23 O O23 GFN . . . DA 3 51.915 -50.988 2.672 1 71.24 ? O23 GFN 301 E 1 HETATM 24 C C24 GFN . . . DA 3 55.539 -46.372 1.925 1 70.73 ? C24 GFN 301 E 1 HETATM 25 C C25 GFN . . . DA 3 55.541 -44.865 1.634 1 76.25 ? C25 GFN 301 E 1 HETATM 26 C C26 GFN . . . DA 3 54.921 -45.406 2.927 1 77.1 ? C26 GFN 301 E 1 HETATM 27 F F27 GFN . . . DA 3 52.753 -47.114 -3.847 1 66.62 ? F27 GFN 301 E 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 27 #