data_7F35
#
_model_server_result.job_id            WWW9jWBbFaqQIIivPQF_4Q 
_model_server_result.datetime_utc      '2024-11-04 23:26:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f35 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":302}' 
#
_entry.id    7F35 
#
_exptl.entry_id    7F35 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7F35 
_cell.length_a            184.071 
_cell.length_b            184.071 
_cell.length_c            100.66 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F35 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,K,L,M,N,O,P,KA,LA 1 1 
C,D,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,MA,NA 2 1 
E,F,DA,EA,FA,GA,HA,IA,JA,OA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 O N N 
? 5 P N N 
? 5 W N N 
? 5 X N N 
? 5 AA N N 
? 5 BA N N 
? 5 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 21 1_555 A SG CYS 92 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf2 A SG CYS 138 A CYS 136 1_555 A SG CYS 198 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
disulf ? disulf4 B SG CYS 143 B CYS 143 1_555 B SG CYS 198 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf5 C SG CYS 23 C CYS 21 1_555 C SG CYS 92 C CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
disulf ? disulf6 C SG CYS 138 C CYS 136 1_555 C SG CYS 198 C CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf8 D SG CYS 143 D CYS 143 1_555 D SG CYS 198 D CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf9 E SG CYS 23 E CYS 21 1_555 E SG CYS 92 E CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf10 E SG CYS 138 E CYS 136 1_555 E SG CYS 198 E CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf11 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf12 F SG CYS 143 F CYS 143 1_555 F SG CYS 198 F CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc1 B OG SER 17 B SER 17 1_555 O NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.076 ? 
metalc ? metalc2 D OG SER 25 D SER 25 1_555 BA NA NA . D NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc3 D OE1 GLU 46 D GLU 46 1_555 CA NA NA . D NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7F35 
_atom_sites.fract_transf_matrix[1][1]    0.005433 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005433 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009934 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GFN A 1 301 2 GFN LIG . 
H 4 EDO A 1 302 1 EDO EDO . 
I 4 EDO A 1 303 3 EDO EDO . 
J 5 NA A 1 304 8 NA NA . 
K 6 SO4 B 1 301 6 SO4 SO4 . 
L 4 EDO B 1 302 5 EDO EDO . 
M 4 EDO B 1 303 6 EDO EDO . 
N 4 EDO B 1 304 8 EDO EDO . 
O 5 NA B 1 305 6 NA NA . 
P 5 NA B 1 306 7 NA NA . 
Q 3 GFN C 1 301 1 GFN LIG . 
R 6 SO4 C 1 302 5 SO4 SO4 . 
S 6 SO4 C 1 303 7 SO4 SO4 . 
T 7 GOL C 1 304 1 GOL GOL . 
U 7 GOL C 1 305 2 GOL GOL . 
V 4 EDO C 1 306 4 EDO EDO . 
W 5 NA C 1 307 1 NA NA . 
X 5 NA C 1 308 2 NA NA . 
Y 8 CL C 1 309 1 CL CL . 
Z 6 SO4 D 1 301 4 SO4 SO4 . 
AA 5 NA D 1 302 3 NA NA . 
BA 5 NA D 1 303 4 NA NA . 
CA 5 NA D 1 304 5 NA NA . 
DA 3 GFN E 1 301 3 GFN LIG . 
EA 6 SO4 F 1 301 1 SO4 SO4 . 
FA 6 SO4 F 1 302 2 SO4 SO4 . 
GA 6 SO4 F 1 303 3 SO4 SO4 . 
HA 9 CIT F 1 304 1 CIT CIT . 
IA 4 EDO F 1 305 2 EDO EDO . 
JA 4 EDO F 1 306 7 EDO EDO . 
KA 10 HOH A 1 401 7 HOH HOH . 
KA 10 HOH A 2 402 10 HOH HOH . 
KA 10 HOH A 3 403 16 HOH HOH . 
KA 10 HOH A 4 404 33 HOH HOH . 
KA 10 HOH A 5 405 18 HOH HOH . 
KA 10 HOH A 6 406 31 HOH HOH . 
KA 10 HOH A 7 407 26 HOH HOH . 
LA 10 HOH B 1 401 42 HOH HOH . 
LA 10 HOH B 2 402 25 HOH HOH . 
LA 10 HOH B 3 403 12 HOH HOH . 
LA 10 HOH B 4 404 37 HOH HOH . 
LA 10 HOH B 5 405 44 HOH HOH . 
LA 10 HOH B 6 406 6 HOH HOH . 
LA 10 HOH B 7 407 11 HOH HOH . 
LA 10 HOH B 8 408 43 HOH HOH . 
LA 10 HOH B 9 409 24 HOH HOH . 
LA 10 HOH B 10 410 19 HOH HOH . 
LA 10 HOH B 11 411 27 HOH HOH . 
MA 10 HOH C 1 401 28 HOH HOH . 
MA 10 HOH C 2 402 35 HOH HOH . 
MA 10 HOH C 3 403 21 HOH HOH . 
MA 10 HOH C 4 404 36 HOH HOH . 
MA 10 HOH C 5 405 38 HOH HOH . 
MA 10 HOH C 6 406 22 HOH HOH . 
MA 10 HOH C 7 407 14 HOH HOH . 
MA 10 HOH C 8 408 4 HOH HOH . 
MA 10 HOH C 9 409 45 HOH HOH . 
MA 10 HOH C 10 410 5 HOH HOH . 
MA 10 HOH C 11 411 40 HOH HOH . 
MA 10 HOH C 12 412 29 HOH HOH . 
NA 10 HOH D 1 401 34 HOH HOH . 
NA 10 HOH D 2 402 13 HOH HOH . 
NA 10 HOH D 3 403 2 HOH HOH . 
NA 10 HOH D 4 404 3 HOH HOH . 
NA 10 HOH D 5 405 1 HOH HOH . 
NA 10 HOH D 6 406 23 HOH HOH . 
NA 10 HOH D 7 407 30 HOH HOH . 
NA 10 HOH D 8 408 20 HOH HOH . 
NA 10 HOH D 9 409 9 HOH HOH . 
NA 10 HOH D 10 410 17 HOH HOH . 
NA 10 HOH D 11 411 41 HOH HOH . 
NA 10 HOH D 12 412 15 HOH HOH . 
NA 10 HOH D 13 413 39 HOH HOH . 
OA 10 HOH F 1 401 32 HOH HOH . 
OA 10 HOH F 2 402 8 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         AA 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               15.505 
_atom_site.Cartn_y               -28.546 
_atom_site.Cartn_z               -35.045 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        113.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#