data_7F3X
#
_model_server_result.job_id            0tVBp6AeGv7fI6vYToNZFg 
_model_server_result.datetime_utc      '2025-04-21 16:45:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f3x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    7F3X 
#
_exptl.entry_id    7F3X 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              440.532 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7F3X 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F3X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C20 H43 N O7 P 1' 
_chem_comp.formula_weight    440.532 
_chem_comp.id                LAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 LAP sing 171 n n 
O1 C13 LAP sing 172 n n 
O2 C1 LAP doub 173 n n 
C1 C2 LAP sing 174 n n 
C2 C3 LAP sing 175 n n 
C2 H21 LAP sing 176 n n 
C2 H22 LAP sing 177 n n 
C3 C4 LAP sing 178 n n 
C3 H31 LAP sing 179 n n 
C3 H32 LAP sing 180 n n 
C4 C5 LAP sing 181 n n 
C4 H41 LAP sing 182 n n 
C4 H42 LAP sing 183 n n 
C5 C6 LAP sing 184 n n 
C5 H51 LAP sing 185 n n 
C5 H52 LAP sing 186 n n 
C6 C7 LAP sing 187 n n 
C6 H61 LAP sing 188 n n 
C6 H62 LAP sing 189 n n 
C7 C8 LAP sing 190 n n 
C7 H71 LAP sing 191 n n 
C7 H72 LAP sing 192 n n 
C8 C9 LAP sing 193 n n 
C8 H81 LAP sing 194 n n 
C8 H82 LAP sing 195 n n 
C9 C10 LAP sing 196 n n 
C9 H91 LAP sing 197 n n 
C9 H92 LAP sing 198 n n 
C10 C11 LAP sing 199 n n 
C10 H101 LAP sing 200 n n 
C10 H102 LAP sing 201 n n 
C11 C12 LAP sing 202 n n 
C11 H111 LAP sing 203 n n 
C11 H112 LAP sing 204 n n 
C12 H121 LAP sing 205 n n 
C12 H122 LAP sing 206 n n 
C12 H123 LAP sing 207 n n 
C13 C14 LAP sing 208 n n 
C13 H131 LAP sing 209 n n 
C13 H132 LAP sing 210 n n 
C14 C15 LAP sing 211 n n 
C14 O3 LAP sing 212 n n 
C14 H14 LAP sing 213 n n 
C15 O4 LAP sing 214 n n 
C15 H151 LAP sing 215 n n 
C15 H152 LAP sing 216 n n 
C16 C17 LAP sing 217 n n 
C16 O6 LAP sing 218 n n 
C16 H161 LAP sing 219 n n 
C16 H162 LAP sing 220 n n 
C17 N8 LAP sing 221 n n 
C17 H171 LAP sing 222 n n 
C17 H172 LAP sing 223 n n 
C18 N8 LAP sing 224 n n 
C18 H181 LAP sing 225 n n 
C18 H182 LAP sing 226 n n 
C18 H183 LAP sing 227 n n 
C19 N8 LAP sing 228 n n 
C19 H191 LAP sing 229 n n 
C19 H192 LAP sing 230 n n 
C19 H193 LAP sing 231 n n 
C20 N8 LAP sing 232 n n 
C20 H201 LAP sing 233 n n 
C20 H202 LAP sing 234 n n 
C20 H203 LAP sing 235 n n 
O3 HO3 LAP sing 236 n n 
O4 P9 LAP sing 237 n n 
O5 P9 LAP doub 238 n n 
O6 P9 LAP sing 239 n n 
O7 P9 LAP sing 240 n n 
O7 HO7 LAP sing 241 n n 
#
_atom_sites.entry_id                     7F3X 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LAP A 1 601 601 LAP LYC . 
D 2 LAP B 1 601 601 LAP LYC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 LAP . . . C 2 123.13 96.466 113.498 1 71.59 ? O1 LAP 601 A 1 
HETATM 2 O O2 LAP . . . C 2 122.185 94.696 112.469 1 71.59 ? O2 LAP 601 A 1 
HETATM 3 C C1 LAP . . . C 2 122.414 95.247 113.496 1 71.59 ? C1 LAP 601 A 1 
HETATM 4 C C2 LAP . . . C 2 121.926 94.635 114.828 1 71.59 ? C2 LAP 601 A 1 
HETATM 5 C C3 LAP . . . C 2 122.979 93.695 115.468 1 71.59 ? C3 LAP 601 A 1 
HETATM 6 C C4 LAP . . . C 2 122.928 93.717 117.018 1 71.59 ? C4 LAP 601 A 1 
HETATM 7 C C5 LAP . . . C 2 123.792 92.59 117.643 1 71.59 ? C5 LAP 601 A 1 
HETATM 8 C C6 LAP . . . C 2 122.98 91.704 118.625 1 71.59 ? C6 LAP 601 A 1 
HETATM 9 C C7 LAP . . . C 2 123.446 91.874 120.096 1 71.59 ? C7 LAP 601 A 1 
HETATM 10 C C8 LAP . . . C 2 122.951 90.713 121.003 1 71.59 ? C8 LAP 601 A 1 
HETATM 11 C C9 LAP . . . C 2 124.03 90.252 122.018 1 71.59 ? C9 LAP 601 A 1 
HETATM 12 C C10 LAP . . . C 2 124.143 88.706 122.094 1 71.59 ? C10 LAP 601 A 1 
HETATM 13 C C11 LAP . . . C 2 124.718 88.227 123.448 1 71.59 ? C11 LAP 601 A 1 
HETATM 14 C C12 LAP . . . C 2 125.623 86.986 123.295 1 71.59 ? C12 LAP 601 A 1 
HETATM 15 C C13 LAP . . . C 2 124.532 96.318 113.617 1 71.59 ? C13 LAP 601 A 1 
HETATM 16 C C14 LAP . . . C 2 125.083 97.604 114.245 1 71.59 ? C14 LAP 601 A 1 
HETATM 17 C C15 LAP . . . C 2 125.241 97.413 115.761 1 71.59 ? C15 LAP 601 A 1 
HETATM 18 C C16 LAP . . . C 2 122.035 99.7 118.664 1 71.59 ? C16 LAP 601 A 1 
HETATM 19 C C17 LAP . . . C 2 121.843 100.121 117.174 1 71.59 ? C17 LAP 601 A 1 
HETATM 20 C C18 LAP . . . C 2 120.832 97.915 116.322 1 71.59 ? C18 LAP 601 A 1 
HETATM 21 C C19 LAP . . . C 2 119.514 99.589 117.386 1 71.59 ? C19 LAP 601 A 1 
HETATM 22 C C20 LAP . . . C 2 120.507 99.975 115.201 1 71.59 ? C20 LAP 601 A 1 
HETATM 23 O O3 LAP . . . C 2 124.177 98.631 114.013 1 71.59 ? O3 LAP 601 A 1 
HETATM 24 O O4 LAP . . . C 2 124.184 98.11 116.393 1 71.59 ? O4 LAP 601 A 1 
HETATM 25 O O5 LAP . . . C 2 124.939 99.949 118.067 1 71.59 ? O5 LAP 601 A 1 
HETATM 26 O O6 LAP . . . C 2 122.855 98.542 118.724 1 71.59 ? O6 LAP 601 A 1 
HETATM 27 O O7 LAP . . . C 2 125.262 97.585 118.695 1 71.59 ? O7 LAP 601 A 1 
HETATM 28 N N8 LAP . . . C 2 120.707 99.377 116.538 1 71.59 ? N8 LAP 601 A 1 
HETATM 29 P P9 LAP . . . C 2 124.348 98.559 117.987 1 71.59 ? P9 LAP 601 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           29 
#