data_7F3X
#
_model_server_result.job_id            c4sYsa-S9Uag78zu7lQt1w 
_model_server_result.datetime_utc      '2025-04-23 22:58:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f3x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    7F3X 
#
_exptl.entry_id    7F3X 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              440.532 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7F3X 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F3X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C20 H43 N O7 P 1' 
_chem_comp.formula_weight    440.532 
_chem_comp.id                LAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 LAP sing 171 n n 
O1 C13 LAP sing 172 n n 
O2 C1 LAP doub 173 n n 
C1 C2 LAP sing 174 n n 
C2 C3 LAP sing 175 n n 
C2 H21 LAP sing 176 n n 
C2 H22 LAP sing 177 n n 
C3 C4 LAP sing 178 n n 
C3 H31 LAP sing 179 n n 
C3 H32 LAP sing 180 n n 
C4 C5 LAP sing 181 n n 
C4 H41 LAP sing 182 n n 
C4 H42 LAP sing 183 n n 
C5 C6 LAP sing 184 n n 
C5 H51 LAP sing 185 n n 
C5 H52 LAP sing 186 n n 
C6 C7 LAP sing 187 n n 
C6 H61 LAP sing 188 n n 
C6 H62 LAP sing 189 n n 
C7 C8 LAP sing 190 n n 
C7 H71 LAP sing 191 n n 
C7 H72 LAP sing 192 n n 
C8 C9 LAP sing 193 n n 
C8 H81 LAP sing 194 n n 
C8 H82 LAP sing 195 n n 
C9 C10 LAP sing 196 n n 
C9 H91 LAP sing 197 n n 
C9 H92 LAP sing 198 n n 
C10 C11 LAP sing 199 n n 
C10 H101 LAP sing 200 n n 
C10 H102 LAP sing 201 n n 
C11 C12 LAP sing 202 n n 
C11 H111 LAP sing 203 n n 
C11 H112 LAP sing 204 n n 
C12 H121 LAP sing 205 n n 
C12 H122 LAP sing 206 n n 
C12 H123 LAP sing 207 n n 
C13 C14 LAP sing 208 n n 
C13 H131 LAP sing 209 n n 
C13 H132 LAP sing 210 n n 
C14 C15 LAP sing 211 n n 
C14 O3 LAP sing 212 n n 
C14 H14 LAP sing 213 n n 
C15 O4 LAP sing 214 n n 
C15 H151 LAP sing 215 n n 
C15 H152 LAP sing 216 n n 
C16 C17 LAP sing 217 n n 
C16 O6 LAP sing 218 n n 
C16 H161 LAP sing 219 n n 
C16 H162 LAP sing 220 n n 
C17 N8 LAP sing 221 n n 
C17 H171 LAP sing 222 n n 
C17 H172 LAP sing 223 n n 
C18 N8 LAP sing 224 n n 
C18 H181 LAP sing 225 n n 
C18 H182 LAP sing 226 n n 
C18 H183 LAP sing 227 n n 
C19 N8 LAP sing 228 n n 
C19 H191 LAP sing 229 n n 
C19 H192 LAP sing 230 n n 
C19 H193 LAP sing 231 n n 
C20 N8 LAP sing 232 n n 
C20 H201 LAP sing 233 n n 
C20 H202 LAP sing 234 n n 
C20 H203 LAP sing 235 n n 
O3 HO3 LAP sing 236 n n 
O4 P9 LAP sing 237 n n 
O5 P9 LAP doub 238 n n 
O6 P9 LAP sing 239 n n 
O7 P9 LAP sing 240 n n 
O7 HO7 LAP sing 241 n n 
#
_atom_sites.entry_id                     7F3X 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LAP A 1 601 601 LAP LYC . 
D 2 LAP B 1 601 601 LAP LYC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 LAP . . . D 2 110.791 137.46 113.503 1 70.84 ? O1 LAP 601 B 1 
HETATM 2 O O2 LAP . . . D 2 111.743 139.238 112.494 1 70.84 ? O2 LAP 601 B 1 
HETATM 3 C C1 LAP . . . D 2 111.507 138.678 113.515 1 70.84 ? C1 LAP 601 B 1 
HETATM 4 C C2 LAP . . . D 2 111.986 139.28 114.855 1 70.84 ? C2 LAP 601 B 1 
HETATM 5 C C3 LAP . . . D 2 110.932 140.217 115.495 1 70.84 ? C3 LAP 601 B 1 
HETATM 6 C C4 LAP . . . D 2 110.992 140.21 117.044 1 70.84 ? C4 LAP 601 B 1 
HETATM 7 C C5 LAP . . . D 2 110.128 141.339 117.665 1 70.84 ? C5 LAP 601 B 1 
HETATM 8 C C6 LAP . . . D 2 110.94 142.237 118.636 1 70.84 ? C6 LAP 601 B 1 
HETATM 9 C C7 LAP . . . D 2 110.48 142.08 120.11 1 70.84 ? C7 LAP 601 B 1 
HETATM 10 C C8 LAP . . . D 2 110.969 143.255 121.002 1 70.84 ? C8 LAP 601 B 1 
HETATM 11 C C9 LAP . . . D 2 109.899 143.702 122.033 1 70.84 ? C9 LAP 601 B 1 
HETATM 12 C C10 LAP . . . D 2 109.769 145.246 122.113 1 70.84 ? C10 LAP 601 B 1 
HETATM 13 C C11 LAP . . . D 2 109.21 145.716 123.478 1 70.84 ? C11 LAP 601 B 1 
HETATM 14 C C12 LAP . . . D 2 108.321 146.971 123.347 1 70.84 ? C12 LAP 601 B 1 
HETATM 15 C C13 LAP . . . D 2 109.387 137.608 113.614 1 70.84 ? C13 LAP 601 B 1 
HETATM 16 C C14 LAP . . . D 2 108.833 136.319 114.231 1 70.84 ? C14 LAP 601 B 1 
HETATM 17 C C15 LAP . . . D 2 108.665 136.502 115.747 1 70.84 ? C15 LAP 601 B 1 
HETATM 18 C C16 LAP . . . D 2 111.893 134.222 118.627 1 70.84 ? C16 LAP 601 B 1 
HETATM 19 C C17 LAP . . . D 2 112.093 133.841 117.128 1 70.84 ? C17 LAP 601 B 1 
HETATM 20 C C18 LAP . . . D 2 113.2 136.044 116.395 1 70.84 ? C18 LAP 601 B 1 
HETATM 21 C C19 LAP . . . D 2 114.44 134.264 117.374 1 70.84 ? C19 LAP 601 B 1 
HETATM 22 C C20 LAP . . . D 2 113.443 134.034 115.168 1 70.84 ? C20 LAP 601 B 1 
HETATM 23 O O3 LAP . . . D 2 109.741 135.293 113.999 1 70.84 ? O3 LAP 601 B 1 
HETATM 24 O O4 LAP . . . D 2 109.742 135.839 116.383 1 70.84 ? O4 LAP 601 B 1 
HETATM 25 O O5 LAP . . . D 2 108.988 133.981 118.034 1 70.84 ? O5 LAP 601 B 1 
HETATM 26 O O6 LAP . . . D 2 111.072 135.378 118.709 1 70.84 ? O6 LAP 601 B 1 
HETATM 27 O O7 LAP . . . D 2 108.666 136.337 118.692 1 70.84 ? O7 LAP 601 B 1 
HETATM 28 N N8 LAP . . . D 2 113.262 134.569 116.534 1 70.84 ? N8 LAP 601 B 1 
HETATM 29 P P9 LAP . . . D 2 109.579 135.372 117.971 1 70.84 ? P9 LAP 601 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#