data_7F3Z # _model_server_result.job_id qUVz1EFkK9PUWL_U-WOkFQ _model_server_result.datetime_utc '2024-11-12 21:52:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 7F3Z # _exptl.entry_id 7F3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F3Z _cell.length_a 56.332 _cell.length_b 153.739 _cell.length_c 164.119 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7F3Z _atom_sites.fract_transf_matrix[1][1] 0.017752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 701 701 NDP NDP . D 3 UMP A 1 702 702 UMP UMP . E 4 TOP A 1 703 703 TOP TOP . F 5 GOL A 1 704 704 GOL GOL . G 2 NDP B 1 701 701 NDP NDP . H 3 UMP B 1 702 702 UMP UMP . I 4 TOP B 1 703 703 TOP TOP . J 5 GOL B 1 704 704 GOL GOL . K 6 HOH A 1 801 185 HOH HOH . K 6 HOH A 2 802 157 HOH HOH . K 6 HOH A 3 803 89 HOH HOH . K 6 HOH A 4 804 63 HOH HOH . K 6 HOH A 5 805 41 HOH HOH . K 6 HOH A 6 806 95 HOH HOH . K 6 HOH A 7 807 144 HOH HOH . K 6 HOH A 8 808 5 HOH HOH . K 6 HOH A 9 809 60 HOH HOH . K 6 HOH A 10 810 168 HOH HOH . K 6 HOH A 11 811 149 HOH HOH . K 6 HOH A 12 812 49 HOH HOH . K 6 HOH A 13 813 53 HOH HOH . K 6 HOH A 14 814 70 HOH HOH . K 6 HOH A 15 815 176 HOH HOH . K 6 HOH A 16 816 73 HOH HOH . K 6 HOH A 17 817 90 HOH HOH . K 6 HOH A 18 818 24 HOH HOH . K 6 HOH A 19 819 43 HOH HOH . K 6 HOH A 20 820 74 HOH HOH . K 6 HOH A 21 821 135 HOH HOH . K 6 HOH A 22 822 195 HOH HOH . K 6 HOH A 23 823 33 HOH HOH . K 6 HOH A 24 824 153 HOH HOH . K 6 HOH A 25 825 94 HOH HOH . K 6 HOH A 26 826 40 HOH HOH . K 6 HOH A 27 827 190 HOH HOH . K 6 HOH A 28 828 148 HOH HOH . K 6 HOH A 29 829 162 HOH HOH . K 6 HOH A 30 830 15 HOH HOH . K 6 HOH A 31 831 4 HOH HOH . K 6 HOH A 32 832 170 HOH HOH . K 6 HOH A 33 833 127 HOH HOH . K 6 HOH A 34 834 75 HOH HOH . K 6 HOH A 35 835 126 HOH HOH . K 6 HOH A 36 836 151 HOH HOH . K 6 HOH A 37 837 50 HOH HOH . K 6 HOH A 38 838 36 HOH HOH . K 6 HOH A 39 839 180 HOH HOH . K 6 HOH A 40 840 160 HOH HOH . K 6 HOH A 41 841 174 HOH HOH . K 6 HOH A 42 842 188 HOH HOH . K 6 HOH A 43 843 12 HOH HOH . K 6 HOH A 44 844 137 HOH HOH . K 6 HOH A 45 845 57 HOH HOH . K 6 HOH A 46 846 19 HOH HOH . K 6 HOH A 47 847 122 HOH HOH . K 6 HOH A 48 848 178 HOH HOH . K 6 HOH A 49 849 146 HOH HOH . K 6 HOH A 50 850 173 HOH HOH . K 6 HOH A 51 851 45 HOH HOH . K 6 HOH A 52 852 3 HOH HOH . K 6 HOH A 53 853 171 HOH HOH . K 6 HOH A 54 854 29 HOH HOH . K 6 HOH A 55 855 102 HOH HOH . K 6 HOH A 56 856 98 HOH HOH . K 6 HOH A 57 857 101 HOH HOH . K 6 HOH A 58 858 21 HOH HOH . K 6 HOH A 59 859 115 HOH HOH . K 6 HOH A 60 860 136 HOH HOH . K 6 HOH A 61 861 169 HOH HOH . K 6 HOH A 62 862 199 HOH HOH . K 6 HOH A 63 863 38 HOH HOH . K 6 HOH A 64 864 147 HOH HOH . K 6 HOH A 65 865 2 HOH HOH . K 6 HOH A 66 866 104 HOH HOH . K 6 HOH A 67 867 161 HOH HOH . K 6 HOH A 68 868 196 HOH HOH . K 6 HOH A 69 869 26 HOH HOH . K 6 HOH A 70 870 100 HOH HOH . K 6 HOH A 71 871 87 HOH HOH . K 6 HOH A 72 872 83 HOH HOH . K 6 HOH A 73 873 107 HOH HOH . K 6 HOH A 74 874 156 HOH HOH . K 6 HOH A 75 875 132 HOH HOH . K 6 HOH A 76 876 175 HOH HOH . K 6 HOH A 77 877 181 HOH HOH . K 6 HOH A 78 878 145 HOH HOH . K 6 HOH A 79 879 72 HOH HOH . K 6 HOH A 80 880 125 HOH HOH . K 6 HOH A 81 881 193 HOH HOH . K 6 HOH A 82 882 48 HOH HOH . K 6 HOH A 83 883 79 HOH HOH . K 6 HOH A 84 884 47 HOH HOH . K 6 HOH A 85 885 109 HOH HOH . K 6 HOH A 86 886 68 HOH HOH . K 6 HOH A 87 887 141 HOH HOH . K 6 HOH A 88 888 117 HOH HOH . K 6 HOH A 89 889 97 HOH HOH . K 6 HOH A 90 890 120 HOH HOH . K 6 HOH A 91 891 99 HOH HOH . K 6 HOH A 92 892 179 HOH HOH . K 6 HOH A 93 893 54 HOH HOH . K 6 HOH A 94 894 124 HOH HOH . K 6 HOH A 95 895 155 HOH HOH . K 6 HOH A 96 896 78 HOH HOH . K 6 HOH A 97 897 177 HOH HOH . K 6 HOH A 98 898 202 HOH HOH . K 6 HOH A 99 899 205 HOH HOH . K 6 HOH A 100 900 167 HOH HOH . K 6 HOH A 101 901 92 HOH HOH . K 6 HOH A 102 902 142 HOH HOH . K 6 HOH A 103 903 140 HOH HOH . K 6 HOH A 104 904 172 HOH HOH . K 6 HOH A 105 905 61 HOH HOH . K 6 HOH A 106 906 197 HOH HOH . L 6 HOH B 1 801 27 HOH HOH . L 6 HOH B 2 802 187 HOH HOH . L 6 HOH B 3 803 128 HOH HOH . L 6 HOH B 4 804 66 HOH HOH . L 6 HOH B 5 805 30 HOH HOH . L 6 HOH B 6 806 59 HOH HOH . L 6 HOH B 7 807 150 HOH HOH . L 6 HOH B 8 808 44 HOH HOH . L 6 HOH B 9 809 131 HOH HOH . L 6 HOH B 10 810 86 HOH HOH . L 6 HOH B 11 811 186 HOH HOH . L 6 HOH B 12 812 32 HOH HOH . L 6 HOH B 13 813 184 HOH HOH . L 6 HOH B 14 814 34 HOH HOH . L 6 HOH B 15 815 96 HOH HOH . L 6 HOH B 16 816 203 HOH HOH . L 6 HOH B 17 817 25 HOH HOH . L 6 HOH B 18 818 14 HOH HOH . L 6 HOH B 19 819 206 HOH HOH . L 6 HOH B 20 820 51 HOH HOH . L 6 HOH B 21 821 39 HOH HOH . L 6 HOH B 22 822 93 HOH HOH . L 6 HOH B 23 823 159 HOH HOH . L 6 HOH B 24 824 76 HOH HOH . L 6 HOH B 25 825 42 HOH HOH . L 6 HOH B 26 826 130 HOH HOH . L 6 HOH B 27 827 52 HOH HOH . L 6 HOH B 28 828 119 HOH HOH . L 6 HOH B 29 829 133 HOH HOH . L 6 HOH B 30 830 192 HOH HOH . L 6 HOH B 31 831 10 HOH HOH . L 6 HOH B 32 832 164 HOH HOH . L 6 HOH B 33 833 1 HOH HOH . L 6 HOH B 34 834 110 HOH HOH . L 6 HOH B 35 835 183 HOH HOH . L 6 HOH B 36 836 121 HOH HOH . L 6 HOH B 37 837 208 HOH HOH . L 6 HOH B 38 838 8 HOH HOH . L 6 HOH B 39 839 165 HOH HOH . L 6 HOH B 40 840 189 HOH HOH . L 6 HOH B 41 841 105 HOH HOH . L 6 HOH B 42 842 55 HOH HOH . L 6 HOH B 43 843 143 HOH HOH . L 6 HOH B 44 844 207 HOH HOH . L 6 HOH B 45 845 7 HOH HOH . L 6 HOH B 46 846 18 HOH HOH . L 6 HOH B 47 847 198 HOH HOH . L 6 HOH B 48 848 82 HOH HOH . L 6 HOH B 49 849 9 HOH HOH . L 6 HOH B 50 850 13 HOH HOH . L 6 HOH B 51 851 111 HOH HOH . L 6 HOH B 52 852 118 HOH HOH . L 6 HOH B 53 853 17 HOH HOH . L 6 HOH B 54 854 16 HOH HOH . L 6 HOH B 55 855 113 HOH HOH . L 6 HOH B 56 856 123 HOH HOH . L 6 HOH B 57 857 103 HOH HOH . L 6 HOH B 58 858 64 HOH HOH . L 6 HOH B 59 859 91 HOH HOH . L 6 HOH B 60 860 163 HOH HOH . L 6 HOH B 61 861 204 HOH HOH . L 6 HOH B 62 862 129 HOH HOH . L 6 HOH B 63 863 77 HOH HOH . L 6 HOH B 64 864 154 HOH HOH . L 6 HOH B 65 865 191 HOH HOH . L 6 HOH B 66 866 6 HOH HOH . L 6 HOH B 67 867 200 HOH HOH . L 6 HOH B 68 868 20 HOH HOH . L 6 HOH B 69 869 71 HOH HOH . L 6 HOH B 70 870 108 HOH HOH . L 6 HOH B 71 871 69 HOH HOH . L 6 HOH B 72 872 80 HOH HOH . L 6 HOH B 73 873 138 HOH HOH . L 6 HOH B 74 874 201 HOH HOH . L 6 HOH B 75 875 35 HOH HOH . L 6 HOH B 76 876 65 HOH HOH . L 6 HOH B 77 877 11 HOH HOH . L 6 HOH B 78 878 62 HOH HOH . L 6 HOH B 79 879 58 HOH HOH . L 6 HOH B 80 880 182 HOH HOH . L 6 HOH B 81 881 67 HOH HOH . L 6 HOH B 82 882 114 HOH HOH . L 6 HOH B 83 883 116 HOH HOH . L 6 HOH B 84 884 139 HOH HOH . L 6 HOH B 85 885 37 HOH HOH . L 6 HOH B 86 886 112 HOH HOH . L 6 HOH B 87 887 194 HOH HOH . L 6 HOH B 88 888 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 5 5.754 29.595 -14.046 1 51.76 0 C1 GOL 704 A 1 HETATM 2 O O1 GOL . . . F 5 5.627 30.852 -13.395 1 53.34 0 O1 GOL 704 A 1 HETATM 3 C C2 GOL . . . F 5 7.07 28.963 -13.672 1 54.39 0 C2 GOL 704 A 1 HETATM 4 O O2 GOL . . . F 5 8.139 29.828 -14.06 1 64.97 0 O2 GOL 704 A 1 HETATM 5 C C3 GOL . . . F 5 7.276 27.598 -14.279 1 53.57 0 C3 GOL 704 A 1 HETATM 6 O O3 GOL . . . F 5 8.592 27.116 -14.016 1 54.9 0 O3 GOL 704 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #